RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 ZFHX3Q15911 3703 aa8.61□□□□□ -1.03
BDNF-202ENST00000356660 SPATA3Q8NHX4 192 aa8.6□□□□□ -1.03
BDNF-202ENST00000356660 A0A1B0GUV1 79 aa8.6□□□□□ -1.03
BDNF-202ENST00000356660 NSD1Q96L73 2696 aaPredicted RBP8.59□□□□□ -1.03
BDNF-202ENST00000356660 TMEM254Q8TBM7 123 aa8.59□□□□□ -1.03
BDNF-202ENST00000356660 MDFIQ99750 246 aa8.58□□□□□ -1.04
BDNF-202ENST00000356660 FAM30AQ9NZY2 134 aa8.58□□□□□ -1.04
BDNF-202ENST00000356660 OBSCN-AS1Q96MR7 158 aa8.57□□□□□ -1.04
BDNF-202ENST00000356660 MXRA5Q9NR99 2828 aa8.57□□□□□ -1.04
BDNF-202ENST00000356660 GIG44P09565 113 aaPredicted RBP8.57□□□□□ -1.04
BDNF-202ENST00000356660 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.57□□□□□ -1.04
BDNF-202ENST00000356660 FP248Q71RG6 208 aaPredicted RBP8.57□□□□□ -1.04
BDNF-202ENST00000356660 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
BDNF-202ENST00000356660 H3BQ85 93 aa8.57□□□□□ -1.04
BDNF-202ENST00000356660 VPS13CQ709C8 3753 aa8.56□□□□□ -1.04
BDNF-202ENST00000356660 CR1P17927 2039 aa8.56□□□□□ -1.04
BDNF-202ENST00000356660 PRYO14603 147 aa8.56□□□□□ -1.04
BDNF-202ENST00000356660 A0A096LNT2 108 aa8.55□□□□□ -1.04
BDNF-202ENST00000356660 H0Y9J4 135 aa8.55□□□□□ -1.04
BDNF-202ENST00000356660 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
BDNF-202ENST00000356660 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
BDNF-202ENST00000356660 RBM12B-AS1Q9P1G2 102 aa8.54□□□□□ -1.04
BDNF-202ENST00000356660 C16orf95Q9H693 158 aa8.53□□□□□ -1.04
BDNF-202ENST00000356660 CXCL6P80162 114 aa8.53□□□□□ -1.04
BDNF-202ENST00000356660 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.04
BDNF-202ENST00000356660 APCP25054 2843 aa8.52□□□□□ -1.05
BDNF-202ENST00000356660 KIAA0087Q14695 138 aa8.52□□□□□ -1.05
BDNF-202ENST00000356660 M0R378 163 aa8.51□□□□□ -1.05
BDNF-202ENST00000356660 LOC110117498A0A087WWA1 95 aa8.5□□□□□ -1.05
BDNF-202ENST00000356660 NDUFB1O75438 58 aa8.5□□□□□ -1.05
BDNF-202ENST00000356660 MP68P56378 58 aa8.49□□□□□ -1.05
BDNF-202ENST00000356660 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
BDNF-202ENST00000356660 CSNK1G2-AS1Q8NCQ2 148 aa8.49□□□□□ -1.05
BDNF-202ENST00000356660 BCE1O60756 84 aa8.49□□□□□ -1.05
BDNF-202ENST00000356660 C6orf48Q9UBA6 75 aa8.49□□□□□ -1.05
BDNF-202ENST00000356660 NIPBLQ6KC79 2804 aaeCLIP8.48□□□□□ -1.05
BDNF-202ENST00000356660 FSHBP01225 129 aa8.48□□□□□ -1.05
BDNF-202ENST00000356660 A8MUN3 132 aa8.47□□□□□ -1.05
BDNF-202ENST00000356660 Q8NDZ9 215 aa8.47□□□□□ -1.05
BDNF-202ENST00000356660 WFDC13Q8IUB5 93 aa8.46□□□□□ -1.05
BDNF-202ENST00000356660 LINC00167Q96N53 147 aa8.46□□□□□ -1.05
BDNF-202ENST00000356660 Q6ZRU5 148 aa8.46□□□□□ -1.06
BDNF-202ENST00000356660 PRR15Q8IV56 129 aa8.46□□□□□ -1.06
BDNF-202ENST00000356660 X6R8D5 127 aa8.46□□□□□ -1.06
BDNF-202ENST00000356660 EGFEM1PQ0D2K5 195 aa8.45□□□□□ -1.06
BDNF-202ENST00000356660 HCG22E2RYF7 251 aa8.44□□□□□ -1.06
BDNF-202ENST00000356660 IGLV6-57P01721 117 aa8.44□□□□□ -1.06
BDNF-202ENST00000356660 SMIM29Q86T20 159 aa8.44□□□□□ -1.06
BDNF-202ENST00000356660 ITPR2Q14571 2701 aa8.44□□□□□ -1.06
BDNF-202ENST00000356660 DEFB116Q30KQ4 102 aa8.44□□□□□ -1.06
BDNF-202ENST00000356660 B9D2Q9BPU9 175 aa8.44□□□□□ -1.06
BDNF-202ENST00000356660 C19orf73Q9NVV2 129 aa8.44□□□□□ -1.06
BDNF-202ENST00000356660 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
BDNF-202ENST00000356660 FAM229BQ4G0N7 80 aa8.42□□□□□ -1.06
BDNF-202ENST00000356660 C14orf177Q52M58 125 aa8.42□□□□□ -1.06
BDNF-202ENST00000356660 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
BDNF-202ENST00000356660 ELOF1P60002 83 aaKnown RBP8.41□□□□□ -1.06
BDNF-202ENST00000356660 IGLV9-49A0A0B4J1Y8 123 aa8.39□□□□□ -1.07
BDNF-202ENST00000356660 IGKV4-1P06312 121 aa8.38□□□□□ -1.07
BDNF-202ENST00000356660 TRBV7-4A0A0J9YYF1 115 aa8.38□□□□□ -1.07
BDNF-202ENST00000356660 LY6G6CO95867 125 aa8.38□□□□□ -1.07
BDNF-202ENST00000356660 DHRS4-AS1Q9P1J3 65 aa8.38□□□□□ -1.07
BDNF-202ENST00000356660 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
BDNF-202ENST00000356660 LINC00208Q96KT6 92 aa8.35□□□□□ -1.07
BDNF-202ENST00000356660 PRLHP81277 87 aa8.35□□□□□ -1.07
BDNF-202ENST00000356660 LCA10Q71F78 164 aa8.34□□□□□ -1.07
BDNF-202ENST00000356660 KRTAP24-1Q3LI83 254 aa8.34□□□□□ -1.07
BDNF-202ENST00000356660 STAB2Q8WWQ8 2551 aa8.34□□□□□ -1.07
BDNF-202ENST00000356660 C7orf33Q8WU49 177 aa8.33□□□□□ -1.08
BDNF-202ENST00000356660 CASC2Q6XLA1 102 aa8.33□□□□□ -1.08
BDNF-202ENST00000356660 ST20-AS1Q8NBB2 130 aa8.33□□□□□ -1.08
BDNF-202ENST00000356660 Q8NAQ8 132 aa8.32□□□□□ -1.08
BDNF-202ENST00000356660 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
BDNF-202ENST00000356660 Q6ZRP5 223 aa8.32□□□□□ -1.08
BDNF-202ENST00000356660 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
BDNF-202ENST00000356660 A0A087WSZ3 146 aa8.31□□□□□ -1.08
BDNF-202ENST00000356660 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
BDNF-202ENST00000356660 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
BDNF-202ENST00000356660 C1orf64Q8NEQ6 169 aa8.3□□□□□ -1.08
BDNF-202ENST00000356660 ZNF706Q9Y5V0 76 aaPredicted RBP8.3□□□□□ -1.08
BDNF-202ENST00000356660 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
BDNF-202ENST00000356660 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
BDNF-202ENST00000356660 REG3GQ6UW15 175 aa8.29□□□□□ -1.08
BDNF-202ENST00000356660 ATP11AUNQ6ZP68 121 aa8.29□□□□□ -1.08
BDNF-202ENST00000356660 LINC00612Q8N6U2 182 aa8.29□□□□□ -1.08
BDNF-202ENST00000356660 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
BDNF-202ENST00000356660 KRTAP10-3P60369 221 aa8.27□□□□□ -1.08
BDNF-202ENST00000356660 HIVEP1P15822 2718 aa8.27□□□□□ -1.09
BDNF-202ENST00000356660 K7EQZ3 153 aa8.27□□□□□ -1.09
BDNF-202ENST00000356660 Q8N377 158 aa8.27□□□□□ -1.09
BDNF-202ENST00000356660 ERC2-IT1O76042 136 aa8.27□□□□□ -1.09
BDNF-202ENST00000356660 PRR34Q9NV39 138 aa8.27□□□□□ -1.09
BDNF-202ENST00000356660 OCR1Q9BZK8 76 aa8.26□□□□□ -1.09
BDNF-202ENST00000356660 C8orf87E5RJ46 101 aa8.26□□□□□ -1.09
BDNF-202ENST00000356660 FAM168BA1KXE4 195 aa8.25□□□□□ -1.09
BDNF-202ENST00000356660 LINC01556Q5JQF7 62 aa8.25□□□□□ -1.09
BDNF-202ENST00000356660 KRTAP1-3Q8IUG1 177 aa8.25□□□□□ -1.09
BDNF-202ENST00000356660 Q8NBF4 154 aa8.25□□□□□ -1.09
BDNF-202ENST00000356660 hDV103S1A0JD37 113 aa8.24□□□□□ -1.09
BDNF-202ENST00000356660 Q9BRP9 147 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms