RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
EBF3-201ENST00000355311 Q6ZVQ6 151 aa9.18□□□□□ -0.94
EBF3-201ENST00000355311 FAM229BQ4G0N7 80 aa9.17□□□□□ -0.94
EBF3-201ENST00000355311 CASC10Q5T4H9 136 aa9.17□□□□□ -0.94
EBF3-201ENST00000355311 Q6ZQT0 140 aa9.16□□□□□ -0.94
EBF3-201ENST00000355311 TRAV7A0A075B6U4 112 aa9.16□□□□□ -0.94
EBF3-201ENST00000355311 DEFB131BA0A096LNP1 70 aa9.16□□□□□ -0.94
EBF3-201ENST00000355311 DNAH10Q8IVF4 4471 aa9.16□□□□□ -0.94
EBF3-201ENST00000355311 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
EBF3-201ENST00000355311 TRBV7-6A0A0J9YX20 115 aa9.15□□□□□ -0.94
EBF3-201ENST00000355311 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
EBF3-201ENST00000355311 LINC00575Q6W349 94 aa9.15□□□□□ -0.94
EBF3-201ENST00000355311 CMYA5Q8N3K9 4069 aa9.15□□□□□ -0.95
EBF3-201ENST00000355311 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.95
EBF3-201ENST00000355311 ATP5EP2Q5VTU8 51 aa9.14□□□□□ -0.95
EBF3-201ENST00000355311 LRCOL1A6NCL2 159 aa9.13□□□□□ -0.95
EBF3-201ENST00000355311 PRR34Q9NV39 138 aa9.13□□□□□ -0.95
EBF3-201ENST00000355311 Q6ZRP5 223 aa9.13□□□□□ -0.95
EBF3-201ENST00000355311 FAM168BA1KXE4 195 aa9.12□□□□□ -0.95
EBF3-201ENST00000355311 COX17Q14061 63 aa9.12□□□□□ -0.95
EBF3-201ENST00000355311 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
EBF3-201ENST00000355311 KLKP1Q107X0 134 aa9.12□□□□□ -0.95
EBF3-201ENST00000355311 C11orf45Q8TAV5 145 aa9.12□□□□□ -0.95
EBF3-201ENST00000355311 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
EBF3-201ENST00000355311 C15orf56Q8N910 161 aa9.11□□□□□ -0.95
EBF3-201ENST00000355311 ZNF73O43830 326 aaPredicted RBP9.1□□□□□ -0.95
EBF3-201ENST00000355311 SMIM26A0A096LP01 95 aa9.1□□□□□ -0.95
EBF3-201ENST00000355311 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
EBF3-201ENST00000355311 A0A0G2JQZ4 141 aa9.07□□□□□ -0.96
EBF3-201ENST00000355311 A0A1W2PNN7 141 aa9.07□□□□□ -0.96
EBF3-201ENST00000355311 IGLV6-57P01721 117 aa9.07□□□□□ -0.96
EBF3-201ENST00000355311 SERTAD4-AS1Q5TG53 156 aa9.07□□□□□ -0.96
EBF3-201ENST00000355311 C3orf84H3BNL1 204 aa9.06□□□□□ -0.96
EBF3-201ENST00000355311 COX7BP24311 80 aa9.06□□□□□ -0.96
EBF3-201ENST00000355311 BPY2O14599 106 aa9.05□□□□□ -0.96
EBF3-201ENST00000355311 NREPQ16612 68 aa9.05□□□□□ -0.96
EBF3-201ENST00000355311 TRBV7-4A0A0J9YYF1 115 aa9.05□□□□□ -0.96
EBF3-201ENST00000355311 VPREB1P12018 145 aa9.05□□□□□ -0.96
EBF3-201ENST00000355311 MUC7Q8TAX7 377 aa9.05□□□□□ -0.96
EBF3-201ENST00000355311 KRTAP26-1Q6PEX3 210 aa9.04□□□□□ -0.96
EBF3-201ENST00000355311 TMEM254Q8TBM7 123 aa9.04□□□□□ -0.96
EBF3-201ENST00000355311 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
EBF3-201ENST00000355311 IGKV2-24A0A0C4DH68 120 aa9.01□□□□□ -0.97
EBF3-201ENST00000355311 HIGD2AQ9BW72 106 aa9.01□□□□□ -0.97
EBF3-201ENST00000355311 NKAPP1Q8N9T2 125 aa9.01□□□□□ -0.97
EBF3-201ENST00000355311 DNAH7Q8WXX0 4024 aa9□□□□□ -0.97
EBF3-201ENST00000355311 LOC110117498A0A087WWA1 95 aa9□□□□□ -0.97
EBF3-201ENST00000355311 C1orf195Q5TG92 126 aa9□□□□□ -0.97
EBF3-201ENST00000355311 LINC00588Q9Y4M8 146 aa9□□□□□ -0.97
EBF3-201ENST00000355311 ST20-AS1Q8NBB2 130 aa9□□□□□ -0.97
EBF3-201ENST00000355311 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
EBF3-201ENST00000355311 HUWE1Q7Z6Z7 4374 aaKnown RBP8.99□□□□□ -0.97
EBF3-201ENST00000355311 FUSP35637 526 aaKnown RBP eCLIP8.98□□□□□ -0.97
EBF3-201ENST00000355311 C7orf33Q8WU49 177 aa8.98□□□□□ -0.97
EBF3-201ENST00000355311 PRR4Q16378 134 aa8.97□□□□□ -0.97
EBF3-201ENST00000355311 TGP01266 2768 aa8.97□□□□□ -0.97
EBF3-201ENST00000355311 CXCL6P80162 114 aa8.97□□□□□ -0.97
EBF3-201ENST00000355311 EGFEM1PQ0D2K5 195 aa8.97□□□□□ -0.97
EBF3-201ENST00000355311 M0R378 163 aa8.97□□□□□ -0.97
EBF3-201ENST00000355311 ELOF1P60002 83 aaKnown RBP8.96□□□□□ -0.98
EBF3-201ENST00000355311 DNAH9Q9NYC9 4486 aa8.95□□□□□ -0.98
EBF3-201ENST00000355311 FAM30AQ9NZY2 134 aa8.95□□□□□ -0.98
EBF3-201ENST00000355311 SEC61GP60059 68 aa8.94□□□□□ -0.98
EBF3-201ENST00000355311 V9GYY9 64 aa8.94□□□□□ -0.98
EBF3-201ENST00000355311 GVQW2A0A096LPI5 108 aaPredicted RBP8.94□□□□□ -0.98
EBF3-201ENST00000355311 DEFB116Q30KQ4 102 aa8.94□□□□□ -0.98
EBF3-201ENST00000355311 PRYO14603 147 aa8.93□□□□□ -0.98
EBF3-201ENST00000355311 ERC2-IT1O76042 136 aa8.93□□□□□ -0.98
EBF3-201ENST00000355311 LINC01556Q5JQF7 62 aa8.93□□□□□ -0.98
EBF3-201ENST00000355311 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
EBF3-201ENST00000355311 PSPHP1O15172 72 aa8.91□□□□□ -0.98
EBF3-201ENST00000355311 IGKV4-1P06312 121 aa8.91□□□□□ -0.98
EBF3-201ENST00000355311 K7EIL1 84 aa8.91□□□□□ -0.98
EBF3-201ENST00000355311 F8WDY8 70 aa8.9□□□□□ -0.98
EBF3-201ENST00000355311 NDUFC1O43677 76 aa8.9□□□□□ -0.98
EBF3-201ENST00000355311 UBE2BP63146 152 aa8.9□□□□□ -0.98
EBF3-201ENST00000355311 A0A096LNI7 61 aa8.9□□□□□ -0.99
EBF3-201ENST00000355311 BCE1O60756 84 aa8.9□□□□□ -0.99
EBF3-201ENST00000355311 KRTAP7-1Q8IUC3 87 aa8.9□□□□□ -0.99
EBF3-201ENST00000355311 OCR1Q9BZK8 76 aa8.9□□□□□ -0.99
EBF3-201ENST00000355311 A8MU10 97 aa8.89□□□□□ -0.99
EBF3-201ENST00000355311 CHTF8P0CG12 524 aa8.89□□□□□ -0.99
EBF3-201ENST00000355311 Q8N377 158 aa8.89□□□□□ -0.99
EBF3-201ENST00000355311 KRTAP1-5Q9BYS1 174 aa8.89□□□□□ -0.99
EBF3-201ENST00000355311 PRLHP81277 87 aa8.88□□□□□ -0.99
EBF3-201ENST00000355311 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
EBF3-201ENST00000355311 Q9BRP9 147 aa8.88□□□□□ -0.99
EBF3-201ENST00000355311 ETDCA0A1B0GVM5 59 aa8.87□□□□□ -0.99
EBF3-201ENST00000355311 PSCAO43653 123 aa8.86□□□□□ -0.99
EBF3-201ENST00000355311 PDE6GP18545 87 aa8.85□□□□□ -0.99
EBF3-201ENST00000355311 H3BNG1 76 aa8.84□□□□□ -0.99
EBF3-201ENST00000355311 DNAH10OSP0CZ25 163 aa8.84□□□□□ -0.99
EBF3-201ENST00000355311 DNAH3Q8TD57 4116 aa8.83□□□□□ -1
EBF3-201ENST00000355311 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
EBF3-201ENST00000355311 C1orf64Q8NEQ6 169 aa8.82□□□□□ -1
EBF3-201ENST00000355311 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
EBF3-201ENST00000355311 PLECQ15149 4684 aaKnown RBP8.8□□□□□ -1
EBF3-201ENST00000355311 MRPL55Q7Z7F7 128 aaKnown RBP8.8□□□□□ -1
EBF3-201ENST00000355311 KCNQ1DNQ9H478 68 aa8.8□□□□□ -1
EBF3-201ENST00000355311 IGLV1-50A0A075B6I6 118 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms