RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 DNAH10Q8IVF4 4471 aa5.69□□□□□ -1.5
TRIM55-204ENST00000353317 LINC01547P58512 204 aaPredicted RBP5.69□□□□□ -1.5
TRIM55-204ENST00000353317 C6orf48Q9UBA6 75 aa5.69□□□□□ -1.5
TRIM55-204ENST00000353317 LINC00588Q9Y4M8 146 aa5.69□□□□□ -1.5
TRIM55-204ENST00000353317 Q6ZVQ6 151 aa5.68□□□□□ -1.5
TRIM55-204ENST00000353317 HAMPP81172 84 aa5.68□□□□□ -1.5
TRIM55-204ENST00000353317 GVQW2A0A096LPI5 108 aaPredicted RBP5.67□□□□□ -1.5
TRIM55-204ENST00000353317 C20orf197Q8N268 126 aa5.67□□□□□ -1.5
TRIM55-204ENST00000353317 DIRC1Q969H9 104 aa5.66□□□□□ -1.5
TRIM55-204ENST00000353317 ZNF73O43830 326 aaPredicted RBP5.66□□□□□ -1.5
TRIM55-204ENST00000353317 KRTAP26-1Q6PEX3 210 aa5.65□□□□□ -1.5
TRIM55-204ENST00000353317 KMT2AQ03164 3969 aa5.65□□□□□ -1.51
TRIM55-204ENST00000353317 APLNQ9ULZ1 77 aa5.65□□□□□ -1.51
TRIM55-204ENST00000353317 TRBV7-4A0A0J9YYF1 115 aa5.64□□□□□ -1.51
TRIM55-204ENST00000353317 PDE6GP18545 87 aa5.64□□□□□ -1.51
TRIM55-204ENST00000353317 ELOF1P60002 83 aaKnown RBP5.64□□□□□ -1.51
TRIM55-204ENST00000353317 NDUFC2-KCTD14E9PQ53 114 aa5.64□□□□□ -1.51
TRIM55-204ENST00000353317 COX7BP24311 80 aa5.64□□□□□ -1.51
TRIM55-204ENST00000353317 HIGD2BQ4VC39 106 aa5.64□□□□□ -1.51
TRIM55-204ENST00000353317 TRAV7A0A075B6U4 112 aa5.63□□□□□ -1.51
TRIM55-204ENST00000353317 H3BQ85 93 aa5.63□□□□□ -1.51
TRIM55-204ENST00000353317 CXCL6P80162 114 aa5.63□□□□□ -1.51
TRIM55-204ENST00000353317 LINC01556Q5JQF7 62 aa5.63□□□□□ -1.51
TRIM55-204ENST00000353317 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.63□□□□□ -1.51
TRIM55-204ENST00000353317 VPS13DQ5THJ4 4388 aa5.63□□□□□ -1.51
TRIM55-204ENST00000353317 VPREB1P12018 145 aa5.63□□□□□ -1.51
TRIM55-204ENST00000353317 H7BZZ5 65 aa5.62□□□□□ -1.51
TRIM55-204ENST00000353317 BCE1O60756 84 aa5.62□□□□□ -1.51
TRIM55-204ENST00000353317 DNAH10OSP0CZ25 163 aa5.62□□□□□ -1.51
TRIM55-204ENST00000353317 SCXQ7RTU7 201 aa5.62□□□□□ -1.51
TRIM55-204ENST00000353317 KRTAP1-5Q9BYS1 174 aa5.62□□□□□ -1.51
TRIM55-204ENST00000353317 C5orf47Q569G3 176 aa5.62□□□□□ -1.51
TRIM55-204ENST00000353317 CAMK2N2Q96S95 79 aa5.62□□□□□ -1.51
TRIM55-204ENST00000353317 CASC10Q5T4H9 136 aa5.61□□□□□ -1.51
TRIM55-204ENST00000353317 C4orf26Q17RF5 130 aa5.61□□□□□ -1.51
TRIM55-204ENST00000353317 Q5XG85 94 aa5.61□□□□□ -1.51
TRIM55-204ENST00000353317 Q6ZRU5 148 aa5.61□□□□□ -1.51
TRIM55-204ENST00000353317 TRBV7-6A0A0J9YX20 115 aa5.61□□□□□ -1.51
TRIM55-204ENST00000353317 KLKP1Q107X0 134 aa5.61□□□□□ -1.51
TRIM55-204ENST00000353317 SNURFQ9Y675 71 aa5.61□□□□□ -1.51
TRIM55-204ENST00000353317 FAM236DA0A1B0GTK5 79 aa5.6□□□□□ -1.51
TRIM55-204ENST00000353317 FAM236CP0DP71 79 aa5.6□□□□□ -1.51
TRIM55-204ENST00000353317 LINC00528Q8N1L1 170 aa5.6□□□□□ -1.51
TRIM55-204ENST00000353317 M0R378 163 aa5.6□□□□□ -1.51
TRIM55-204ENST00000353317 C15orf56Q8N910 161 aa5.6□□□□□ -1.51
TRIM55-204ENST00000353317 RMI2Q96E14 147 aa5.6□□□□□ -1.51
TRIM55-204ENST00000353317 Q6ZRP5 223 aa5.58□□□□□ -1.52
TRIM55-204ENST00000353317 IGKV2D-24A0A075B6R9 120 aa5.58□□□□□ -1.52
TRIM55-204ENST00000353317 Q8N9L7 120 aa5.57□□□□□ -1.52
TRIM55-204ENST00000353317 EPM2AB3EWF7 344 aa5.57□□□□□ -1.52
TRIM55-204ENST00000353317 HRCT1Q6UXD1 115 aa5.57□□□□□ -1.52
TRIM55-204ENST00000353317 F8WEM9 126 aa5.56□□□□□ -1.52
TRIM55-204ENST00000353317 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
TRIM55-204ENST00000353317 NUPR2A6NF83 97 aa5.55□□□□□ -1.52
TRIM55-204ENST00000353317 C1orf43Q9BWL3 253 aa5.55□□□□□ -1.52
TRIM55-204ENST00000353317 HYDINQ4G0P3 5121 aa5.55□□□□□ -1.52
TRIM55-204ENST00000353317 BPY2O14599 106 aa5.55□□□□□ -1.52
TRIM55-204ENST00000353317 SERP1Q9Y6X1 66 aa5.55□□□□□ -1.52
TRIM55-204ENST00000353317 NREPQ16612 68 aa5.54□□□□□ -1.52
TRIM55-204ENST00000353317 C3orf84H3BNL1 204 aa5.54□□□□□ -1.52
TRIM55-204ENST00000353317 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
TRIM55-204ENST00000353317 UBE2DNLQ8IWF7 75 aa5.54□□□□□ -1.52
TRIM55-204ENST00000353317 SERTAD4-AS1Q5TG53 156 aa5.53□□□□□ -1.52
TRIM55-204ENST00000353317 DEFB105AQ8NG35 78 aa5.53□□□□□ -1.52
TRIM55-204ENST00000353317 Q8N377 158 aa5.53□□□□□ -1.52
TRIM55-204ENST00000353317 KCNQ1DNQ9H478 68 aa5.53□□□□□ -1.52
TRIM55-204ENST00000353317 SYCNQ0VAF6 134 aa5.52□□□□□ -1.53
TRIM55-204ENST00000353317 TMEM254Q8TBM7 123 aa5.52□□□□□ -1.53
TRIM55-204ENST00000353317 C7orf33Q8WU49 177 aa5.52□□□□□ -1.53
TRIM55-204ENST00000353317 NDUFC1O43677 76 aa5.51□□□□□ -1.53
TRIM55-204ENST00000353317 NKAPP1Q8N9T2 125 aa5.51□□□□□ -1.53
TRIM55-204ENST00000353317 IGLV5-48A0A075B6I7 105 aa5.51□□□□□ -1.53
TRIM55-204ENST00000353317 OCR1Q9BZK8 76 aa5.51□□□□□ -1.53
TRIM55-204ENST00000353317 FP248Q71RG6 208 aaPredicted RBP5.5□□□□□ -1.53
TRIM55-204ENST00000353317 NBDYA0A0U1RRE5 68 aa5.49□□□□□ -1.53
TRIM55-204ENST00000353317 RPL37AP8A6NKH3 93 aa5.49□□□□□ -1.53
TRIM55-204ENST00000353317 ERC2-IT1O76042 136 aa5.49□□□□□ -1.53
TRIM55-204ENST00000353317 Q9BRP9 147 aa5.49□□□□□ -1.53
TRIM55-204ENST00000353317 FAM168BA1KXE4 195 aa5.49□□□□□ -1.53
TRIM55-204ENST00000353317 F8WDY8 70 aa5.49□□□□□ -1.53
TRIM55-204ENST00000353317 Q6ZRN7 208 aaPredicted RBP5.49□□□□□ -1.53
TRIM55-204ENST00000353317 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
TRIM55-204ENST00000353317 Q6ZRX8 168 aa5.48□□□□□ -1.53
TRIM55-204ENST00000353317 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
TRIM55-204ENST00000353317 A0A1W2PNM2 257 aa5.48□□□□□ -1.53
TRIM55-204ENST00000353317 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
TRIM55-204ENST00000353317 SMIM26A0A096LP01 95 aa5.47□□□□□ -1.53
TRIM55-204ENST00000353317 A0A0U1RQV1 116 aa5.47□□□□□ -1.53
TRIM55-204ENST00000353317 ST20-AS1Q8NBB2 130 aa5.47□□□□□ -1.53
TRIM55-204ENST00000353317 WWC2-AS2Q96NR7 200 aa5.47□□□□□ -1.53
TRIM55-204ENST00000353317 LINC00474Q9P2X8 69 aa5.47□□□□□ -1.53
TRIM55-204ENST00000353317 IGLV1-50A0A075B6I6 118 aa5.46□□□□□ -1.53
TRIM55-204ENST00000353317 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.53
TRIM55-204ENST00000353317 FUSP35637 526 aaKnown RBP eCLIP5.46□□□□□ -1.53
TRIM55-204ENST00000353317 TNP2Q05952 138 aa5.46□□□□□ -1.53
TRIM55-204ENST00000353317 KRTAP7-1Q8IUC3 87 aa5.46□□□□□ -1.53
TRIM55-204ENST00000353317 DHRS4-AS1Q9P1J3 65 aa5.46□□□□□ -1.53
TRIM55-204ENST00000353317 DNAH6Q9C0G6 4158 aa5.46□□□□□ -1.53
TRIM55-204ENST00000353317 LRCOL1A6NCL2 159 aa5.46□□□□□ -1.54
TRIM55-204ENST00000353317 ATP5EP56381 51 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms