RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 Q1T7F1 81 aa9.96□□□□□ -0.82
TRAF3-202ENST00000351691 NOTCH3Q9UM47 2321 aa9.96□□□□□ -0.82
TRAF3-202ENST00000351691 HIGD2AQ9BW72 106 aa9.95□□□□□ -0.82
TRAF3-202ENST00000351691 LINC00528Q8N1L1 170 aa9.94□□□□□ -0.82
TRAF3-202ENST00000351691 Q8N9L7 120 aa9.93□□□□□ -0.82
TRAF3-202ENST00000351691 TENM1Q9UKZ4 2725 aa9.93□□□□□ -0.82
TRAF3-202ENST00000351691 HIGD2BQ4VC39 106 aa9.92□□□□□ -0.82
TRAF3-202ENST00000351691 A0A096LPF7 62 aa9.92□□□□□ -0.82
TRAF3-202ENST00000351691 M0R378 163 aa9.92□□□□□ -0.82
TRAF3-202ENST00000351691 Q6ZRU5 148 aa9.91□□□□□ -0.82
TRAF3-202ENST00000351691 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
TRAF3-202ENST00000351691 VPREB1P12018 145 aa9.91□□□□□ -0.82
TRAF3-202ENST00000351691 DAD1P61803 113 aa9.91□□□□□ -0.82
TRAF3-202ENST00000351691 PRR34Q9NV39 138 aa9.9□□□□□ -0.82
TRAF3-202ENST00000351691 ATRQ13535 2644 aa9.89□□□□□ -0.83
TRAF3-202ENST00000351691 DEFB135Q30KP9 77 aa9.88□□□□□ -0.83
TRAF3-202ENST00000351691 ZCCHC13Q8WW36 166 aaKnown RBP9.88□□□□□ -0.83
TRAF3-202ENST00000351691 XAGE1AQ9HD64 81 aa9.87□□□□□ -0.83
TRAF3-202ENST00000351691 VWFP04275 2813 aa9.86□□□□□ -0.83
TRAF3-202ENST00000351691 IGLV5-48A0A075B6I7 105 aa9.86□□□□□ -0.83
TRAF3-202ENST00000351691 LELP1Q5T871 98 aa9.86□□□□□ -0.83
TRAF3-202ENST00000351691 Q8NAQ8 132 aa9.86□□□□□ -0.83
TRAF3-202ENST00000351691 CYP4F30PQ9H0H9 118 aa9.86□□□□□ -0.83
TRAF3-202ENST00000351691 SPART-AS1P0CW21 52 aa9.86□□□□□ -0.83
TRAF3-202ENST00000351691 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
TRAF3-202ENST00000351691 Q6ZRP5 223 aa9.86□□□□□ -0.83
TRAF3-202ENST00000351691 SMIM29Q86T20 159 aa9.85□□□□□ -0.83
TRAF3-202ENST00000351691 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
TRAF3-202ENST00000351691 C1orf64Q8NEQ6 169 aa9.84□□□□□ -0.83
TRAF3-202ENST00000351691 KLK12Q9UKR0 248 aa9.84□□□□□ -0.83
TRAF3-202ENST00000351691 FAM30AQ9NZY2 134 aa9.83□□□□□ -0.84
TRAF3-202ENST00000351691 DEFB4AO15263 64 aa9.82□□□□□ -0.84
TRAF3-202ENST00000351691 MAST4O15021 2626 aa9.82□□□□□ -0.84
TRAF3-202ENST00000351691 ETDCA0A1B0GVM5 59 aa9.82□□□□□ -0.84
TRAF3-202ENST00000351691 C3orf84H3BNL1 204 aa9.82□□□□□ -0.84
TRAF3-202ENST00000351691 KPRPQ5T749 579 aaPredicted RBP9.81□□□□□ -0.84
TRAF3-202ENST00000351691 TRRAPQ9Y4A5 3859 aa9.8□□□□□ -0.84
TRAF3-202ENST00000351691 Q8N377 158 aa9.79□□□□□ -0.84
TRAF3-202ENST00000351691 CAMK2N2Q96S95 79 aa9.78□□□□□ -0.84
TRAF3-202ENST00000351691 FBN1P35555 2871 aaKnown RBP9.78□□□□□ -0.84
TRAF3-202ENST00000351691 KCNQ1DNQ9H478 68 aa9.77□□□□□ -0.85
TRAF3-202ENST00000351691 TRAV22A0A0B4J277 110 aa9.76□□□□□ -0.85
TRAF3-202ENST00000351691 NDUFB1O75438 58 aa9.76□□□□□ -0.85
TRAF3-202ENST00000351691 A0A1W2PNM2 257 aa9.75□□□□□ -0.85
TRAF3-202ENST00000351691 H3BNG1 76 aa9.75□□□□□ -0.85
TRAF3-202ENST00000351691 KRTAP24-1Q3LI83 254 aa9.75□□□□□ -0.85
TRAF3-202ENST00000351691 SPRR4Q96PI1 79 aa9.75□□□□□ -0.85
TRAF3-202ENST00000351691 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-202ENST00000351691 HTN3P15516 51 aa9.75□□□□□ -0.85
TRAF3-202ENST00000351691 STAB1Q9NY15 2570 aa9.74□□□□□ -0.85
TRAF3-202ENST00000351691 TNP2Q05952 138 aa9.74□□□□□ -0.85
TRAF3-202ENST00000351691 DHRS4-AS1Q9P1J3 65 aa9.74□□□□□ -0.85
TRAF3-202ENST00000351691 PSCAO43653 123 aa9.74□□□□□ -0.85
TRAF3-202ENST00000351691 Q8NBF4 154 aa9.74□□□□□ -0.85
TRAF3-202ENST00000351691 DSCR10P59022 87 aa9.72□□□□□ -0.85
TRAF3-202ENST00000351691 LRCOL1A6NCL2 159 aa9.71□□□□□ -0.85
TRAF3-202ENST00000351691 KRTAP26-1Q6PEX3 210 aa9.71□□□□□ -0.85
TRAF3-202ENST00000351691 C1orf137Q5JT78 98 aa9.71□□□□□ -0.86
TRAF3-202ENST00000351691 PSPHP1O15172 72 aa9.7□□□□□ -0.86
TRAF3-202ENST00000351691 DEFB105AQ8NG35 78 aa9.7□□□□□ -0.86
TRAF3-202ENST00000351691 CD164Q04900 197 aa9.68□□□□□ -0.86
TRAF3-202ENST00000351691 HCG22E2RYF7 251 aa9.68□□□□□ -0.86
TRAF3-202ENST00000351691 C15orf56Q8N910 161 aa9.68□□□□□ -0.86
TRAF3-202ENST00000351691 NKAPP1Q8N9T2 125 aa9.67□□□□□ -0.86
TRAF3-202ENST00000351691 CMYA5Q8N3K9 4069 aa9.66□□□□□ -0.86
TRAF3-202ENST00000351691 K7EQZ3 153 aa9.66□□□□□ -0.86
TRAF3-202ENST00000351691 Q6ZRX8 168 aa9.66□□□□□ -0.86
TRAF3-202ENST00000351691 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
TRAF3-202ENST00000351691 SYCNQ0VAF6 134 aa9.66□□□□□ -0.86
TRAF3-202ENST00000351691 ST20-AS1Q8NBB2 130 aa9.66□□□□□ -0.86
TRAF3-202ENST00000351691 UBE2BP63146 152 aa9.65□□□□□ -0.86
TRAF3-202ENST00000351691 SPANXA2-OT1Q8N9U9 137 aa9.65□□□□□ -0.86
TRAF3-202ENST00000351691 C7orf33Q8WU49 177 aa9.65□□□□□ -0.86
TRAF3-202ENST00000351691 COL6A5A8TX70 2615 aa9.65□□□□□ -0.86
TRAF3-202ENST00000351691 KRTAP4-16G5E9R7 235 aaPredicted RBP9.64□□□□□ -0.87
TRAF3-202ENST00000351691 PKD1L1Q8TDX9 2849 aa9.64□□□□□ -0.87
TRAF3-202ENST00000351691 A8MUN3 132 aa9.63□□□□□ -0.87
TRAF3-202ENST00000351691 MP68P56378 58 aa9.63□□□□□ -0.87
TRAF3-202ENST00000351691 Q5VV11 94 aa9.63□□□□□ -0.87
TRAF3-202ENST00000351691 H3BPC8 53 aa9.63□□□□□ -0.87
TRAF3-202ENST00000351691 SPRR1AP35321 89 aa9.63□□□□□ -0.87
TRAF3-202ENST00000351691 B9D2Q9BPU9 175 aa9.63□□□□□ -0.87
TRAF3-202ENST00000351691 LIMD2Q9BT23 127 aa9.63□□□□□ -0.87
TRAF3-202ENST00000351691 UBE2AP49459 152 aa9.62□□□□□ -0.87
TRAF3-202ENST00000351691 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
TRAF3-202ENST00000351691 Q9BRP9 147 aa9.62□□□□□ -0.87
TRAF3-202ENST00000351691 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
TRAF3-202ENST00000351691 TLX1NBP0CAT3 122 aa9.6□□□□□ -0.87
TRAF3-202ENST00000351691 KRTAP10-11P60412 298 aa9.59□□□□□ -0.87
TRAF3-202ENST00000351691 SERTAD4-AS1Q5TG53 156 aa9.59□□□□□ -0.87
TRAF3-202ENST00000351691 PRR4Q16378 134 aa9.58□□□□□ -0.88
TRAF3-202ENST00000351691 OXLD1Q5BKU9 147 aa9.58□□□□□ -0.88
TRAF3-202ENST00000351691 Q8N9P0 234 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-202ENST00000351691 RETNQ9HD89 108 aa9.58□□□□□ -0.88
TRAF3-202ENST00000351691 IGLV1-50A0A075B6I6 118 aa9.57□□□□□ -0.88
TRAF3-202ENST00000351691 NBEAL2Q6ZNJ1 2754 aa9.57□□□□□ -0.88
TRAF3-202ENST00000351691 LINC01556Q5JQF7 62 aa9.56□□□□□ -0.88
TRAF3-202ENST00000351691 MRPL55Q7Z7F7 128 aaKnown RBP9.56□□□□□ -0.88
TRAF3-202ENST00000351691 LINC00588Q9Y4M8 146 aa9.56□□□□□ -0.88
TRAF3-202ENST00000351691 LINC00208Q96KT6 92 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms