RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 SCXQ7RTU7 201 aa9.51□□□□□ -0.89
ARHGEF1-202ENST00000347545 RMI2Q96E14 147 aa9.51□□□□□ -0.89
ARHGEF1-202ENST00000347545 KRTAP24-1Q3LI83 254 aa9.5□□□□□ -0.89
ARHGEF1-202ENST00000347545 STAB1Q9NY15 2570 aa9.5□□□□□ -0.89
ARHGEF1-202ENST00000347545 SERTAD4-AS1Q5TG53 156 aa9.5□□□□□ -0.89
ARHGEF1-202ENST00000347545 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
ARHGEF1-202ENST00000347545 PDE6GP18545 87 aa9.49□□□□□ -0.89
ARHGEF1-202ENST00000347545 H7BZZ5 65 aa9.48□□□□□ -0.89
ARHGEF1-202ENST00000347545 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
ARHGEF1-202ENST00000347545 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
ARHGEF1-202ENST00000347545 FLNBO75369 2602 aaKnown RBP9.47□□□□□ -0.89
ARHGEF1-202ENST00000347545 F8P00451 2351 aa9.46□□□□□ -0.89
ARHGEF1-202ENST00000347545 DNAH10OSP0CZ25 163 aa9.46□□□□□ -0.89
ARHGEF1-202ENST00000347545 CASC10Q5T4H9 136 aa9.46□□□□□ -0.9
ARHGEF1-202ENST00000347545 MAST4O15021 2626 aa9.45□□□□□ -0.9
ARHGEF1-202ENST00000347545 F8WEM9 126 aa9.45□□□□□ -0.9
ARHGEF1-202ENST00000347545 CXCL6P80162 114 aa9.45□□□□□ -0.9
ARHGEF1-202ENST00000347545 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
ARHGEF1-202ENST00000347545 HUWE1Q7Z6Z7 4374 aaKnown RBP9.45□□□□□ -0.9
ARHGEF1-202ENST00000347545 F8WDY8 70 aa9.45□□□□□ -0.9
ARHGEF1-202ENST00000347545 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
ARHGEF1-202ENST00000347545 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
ARHGEF1-202ENST00000347545 PKIGQ9Y2B9 76 aa9.43□□□□□ -0.9
ARHGEF1-202ENST00000347545 FAM168BA1KXE4 195 aa9.42□□□□□ -0.9
ARHGEF1-202ENST00000347545 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
ARHGEF1-202ENST00000347545 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
ARHGEF1-202ENST00000347545 TM2D3Q9BRN9 247 aa9.42□□□□□ -0.9
ARHGEF1-202ENST00000347545 TRAV7A0A075B6U4 112 aa9.41□□□□□ -0.9
ARHGEF1-202ENST00000347545 SERP1Q9Y6X1 66 aa9.41□□□□□ -0.9
ARHGEF1-202ENST00000347545 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
ARHGEF1-202ENST00000347545 LYSTQ99698 3801 aa9.4□□□□□ -0.9
ARHGEF1-202ENST00000347545 FP248Q71RG6 208 aaPredicted RBP9.4□□□□□ -0.9
ARHGEF1-202ENST00000347545 Q8N377 158 aa9.4□□□□□ -0.9
ARHGEF1-202ENST00000347545 NKAPP1Q8N9T2 125 aa9.4□□□□□ -0.9
ARHGEF1-202ENST00000347545 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
ARHGEF1-202ENST00000347545 KRTAP4-16G5E9R7 235 aaPredicted RBP9.39□□□□□ -0.91
ARHGEF1-202ENST00000347545 BAHCC1Q9P281 2608 aa9.38□□□□□ -0.91
ARHGEF1-202ENST00000347545 BCE1O60756 84 aa9.38□□□□□ -0.91
ARHGEF1-202ENST00000347545 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
ARHGEF1-202ENST00000347545 DNAH10Q8IVF4 4471 aa9.38□□□□□ -0.91
ARHGEF1-202ENST00000347545 RPL37AP8A6NKH3 93 aa9.38□□□□□ -0.91
ARHGEF1-202ENST00000347545 Q8N9L7 120 aa9.38□□□□□ -0.91
ARHGEF1-202ENST00000347545 Q9BRP9 147 aa9.38□□□□□ -0.91
ARHGEF1-202ENST00000347545 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
ARHGEF1-202ENST00000347545 DEFB105AQ8NG35 78 aa9.37□□□□□ -0.91
ARHGEF1-202ENST00000347545 MRAPQ8TCY5 172 aa9.36□□□□□ -0.91
ARHGEF1-202ENST00000347545 A0A0U1RQV1 116 aa9.36□□□□□ -0.91
ARHGEF1-202ENST00000347545 IGLV1-50A0A075B6I6 118 aa9.35□□□□□ -0.91
ARHGEF1-202ENST00000347545 IGLV5-37A0A075B6J1 123 aa9.35□□□□□ -0.91
ARHGEF1-202ENST00000347545 PRO0628Q9UI54 55 aa9.35□□□□□ -0.91
ARHGEF1-202ENST00000347545 KLKP1Q107X0 134 aa9.35□□□□□ -0.91
ARHGEF1-202ENST00000347545 Q6ZRX8 168 aa9.35□□□□□ -0.91
ARHGEF1-202ENST00000347545 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
ARHGEF1-202ENST00000347545 SPRR1AP35321 89 aa9.35□□□□□ -0.91
ARHGEF1-202ENST00000347545 IGLV5-48A0A075B6I7 105 aa9.34□□□□□ -0.91
ARHGEF1-202ENST00000347545 DNAH9Q9NYC9 4486 aa9.33□□□□□ -0.92
ARHGEF1-202ENST00000347545 BRK1Q8WUW1 75 aa9.33□□□□□ -0.92
ARHGEF1-202ENST00000347545 NBEAL1Q6ZS30 2694 aa9.33□□□□□ -0.92
ARHGEF1-202ENST00000347545 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
ARHGEF1-202ENST00000347545 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
ARHGEF1-202ENST00000347545 IGKV4-1P06312 121 aa9.33□□□□□ -0.92
ARHGEF1-202ENST00000347545 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
ARHGEF1-202ENST00000347545 PRYO14603 147 aa9.31□□□□□ -0.92
ARHGEF1-202ENST00000347545 FAM229BQ4G0N7 80 aa9.31□□□□□ -0.92
ARHGEF1-202ENST00000347545 SMIM26A0A096LP01 95 aa9.31□□□□□ -0.92
ARHGEF1-202ENST00000347545 TNP2Q05952 138 aa9.31□□□□□ -0.92
ARHGEF1-202ENST00000347545 BPY2O14599 106 aa9.3□□□□□ -0.92
ARHGEF1-202ENST00000347545 ERC2-IT1O76042 136 aa9.3□□□□□ -0.92
ARHGEF1-202ENST00000347545 DHRS4-AS1Q9P1J3 65 aa9.3□□□□□ -0.92
ARHGEF1-202ENST00000347545 A0A1W2PNM2 257 aa9.29□□□□□ -0.92
ARHGEF1-202ENST00000347545 NREPQ16612 68 aa9.29□□□□□ -0.92
ARHGEF1-202ENST00000347545 K7EIL1 84 aa9.28□□□□□ -0.92
ARHGEF1-202ENST00000347545 COL7A1Q02388 2944 aa9.28□□□□□ -0.92
ARHGEF1-202ENST00000347545 ETDCA0A1B0GVM5 59 aa9.27□□□□□ -0.93
ARHGEF1-202ENST00000347545 MRPL55Q7Z7F7 128 aaKnown RBP9.27□□□□□ -0.93
ARHGEF1-202ENST00000347545 TMEM254Q8TBM7 123 aa9.26□□□□□ -0.93
ARHGEF1-202ENST00000347545 KRTAP1-5Q9BYS1 174 aa9.25□□□□□ -0.93
ARHGEF1-202ENST00000347545 DNAH7Q8WXX0 4024 aa9.25□□□□□ -0.93
ARHGEF1-202ENST00000347545 LRCOL1A6NCL2 159 aa9.24□□□□□ -0.93
ARHGEF1-202ENST00000347545 C1orf137Q5JT78 98 aa9.23□□□□□ -0.93
ARHGEF1-202ENST00000347545 COL6A5A8TX70 2615 aa9.22□□□□□ -0.93
ARHGEF1-202ENST00000347545 SMIM29Q86T20 159 aa9.22□□□□□ -0.93
ARHGEF1-202ENST00000347545 OCR1Q9BZK8 76 aa9.22□□□□□ -0.93
ARHGEF1-202ENST00000347545 DYNC2H1Q8NCM8 4307 aaKnown RBP9.22□□□□□ -0.93
ARHGEF1-202ENST00000347545 HIGD2AQ9BW72 106 aa9.21□□□□□ -0.93
ARHGEF1-202ENST00000347545 Q8NBF4 154 aa9.21□□□□□ -0.94
ARHGEF1-202ENST00000347545 REG3GQ6UW15 175 aa9.2□□□□□ -0.94
ARHGEF1-202ENST00000347545 FUSP35637 526 aaKnown RBP eCLIP9.2□□□□□ -0.94
ARHGEF1-202ENST00000347545 SEC61GP60059 68 aa9.2□□□□□ -0.94
ARHGEF1-202ENST00000347545 CSMD3Q7Z407 3707 aa9.2□□□□□ -0.94
ARHGEF1-202ENST00000347545 A0A096LNI7 61 aa9.2□□□□□ -0.94
ARHGEF1-202ENST00000347545 UBE2BP63146 152 aa9.2□□□□□ -0.94
ARHGEF1-202ENST00000347545 SPRR4Q96PI1 79 aa9.2□□□□□ -0.94
ARHGEF1-202ENST00000347545 A0A0G2JQZ4 141 aa9.18□□□□□ -0.94
ARHGEF1-202ENST00000347545 A0A1W2PNN7 141 aa9.18□□□□□ -0.94
ARHGEF1-202ENST00000347545 NDUFC1O43677 76 aa9.18□□□□□ -0.94
ARHGEF1-202ENST00000347545 A0A1B0GW54 56 aa9.17□□□□□ -0.94
ARHGEF1-202ENST00000347545 FAM30AQ9NZY2 134 aa9.16□□□□□ -0.94
ARHGEF1-202ENST00000347545 DSCR10P59022 87 aa9.16□□□□□ -0.94
ARHGEF1-202ENST00000347545 LINC00476Q8WZB0 136 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms