RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 SPART-AS1P0CW21 52 aa11.75□□□□□ -0.53
VHL-202ENST00000345392 NDUFC1O43677 76 aa11.75□□□□□ -0.53
VHL-202ENST00000345392 IGKV4-1P06312 121 aa11.75□□□□□ -0.53
VHL-202ENST00000345392 M0R378 163 aa11.74□□□□□ -0.53
VHL-202ENST00000345392 APOC4P55056 127 aa11.74□□□□□ -0.53
VHL-202ENST00000345392 FBN1P35555 2871 aaKnown RBP11.74□□□□□ -0.53
VHL-202ENST00000345392 DEFB105AQ8NG35 78 aa11.73□□□□□ -0.53
VHL-202ENST00000345392 WFDC10BQ8IUB3 73 aa11.73□□□□□ -0.53
VHL-202ENST00000345392 MRAPQ8TCY5 172 aa11.72□□□□□ -0.53
VHL-202ENST00000345392 ANK2Q01484 3957 aa11.72□□□□□ -0.53
VHL-202ENST00000345392 RETNQ9HD89 108 aa11.71□□□□□ -0.54
VHL-202ENST00000345392 PRO0628Q9UI54 55 aa11.71□□□□□ -0.54
VHL-202ENST00000345392 STAB1Q9NY15 2570 aa11.7□□□□□ -0.54
VHL-202ENST00000345392 COL6A5A8TX70 2615 aa11.7□□□□□ -0.54
VHL-202ENST00000345392 EGFEM1PQ0D2K5 195 aa11.7□□□□□ -0.54
VHL-202ENST00000345392 FAM229BQ4G0N7 80 aa11.7□□□□□ -0.54
VHL-202ENST00000345392 Q6ZRP5 223 aa11.69□□□□□ -0.54
VHL-202ENST00000345392 OCR1Q9BZK8 76 aa11.69□□□□□ -0.54
VHL-202ENST00000345392 TENM3Q9P273 2699 aa11.69□□□□□ -0.54
VHL-202ENST00000345392 C15orf56Q8N910 161 aa11.68□□□□□ -0.54
VHL-202ENST00000345392 KRTAP26-1Q6PEX3 210 aa11.67□□□□□ -0.54
VHL-202ENST00000345392 HIGD2AQ9BW72 106 aa11.67□□□□□ -0.54
VHL-202ENST00000345392 MPLKIPQ8TAP9 179 aa11.66□□□□□ -0.54
VHL-202ENST00000345392 PRYO14603 147 aa11.66□□□□□ -0.54
VHL-202ENST00000345392 A0A0U1RQV1 116 aa11.65□□□□□ -0.54
VHL-202ENST00000345392 ATP5EP56381 51 aaPredicted RBP11.65□□□□□ -0.54
VHL-202ENST00000345392 ERC2-IT1O76042 136 aa11.65□□□□□ -0.54
VHL-202ENST00000345392 Q8N377 158 aa11.64□□□□□ -0.55
VHL-202ENST00000345392 C1orf43Q9BWL3 253 aa11.63□□□□□ -0.55
VHL-202ENST00000345392 KRTAP24-1Q3LI83 254 aa11.62□□□□□ -0.55
VHL-202ENST00000345392 FAM30AQ9NZY2 134 aa11.62□□□□□ -0.55
VHL-202ENST00000345392 KPRPQ5T749 579 aaPredicted RBP11.62□□□□□ -0.55
VHL-202ENST00000345392 FUSP35637 526 aaKnown RBP eCLIP11.61□□□□□ -0.55
VHL-202ENST00000345392 OXLD1Q5BKU9 147 aa11.61□□□□□ -0.55
VHL-202ENST00000345392 SERTAD4-AS1Q5TG53 156 aa11.61□□□□□ -0.55
VHL-202ENST00000345392 BRK1Q8WUW1 75 aa11.6□□□□□ -0.55
VHL-202ENST00000345392 PKIGQ9Y2B9 76 aa11.6□□□□□ -0.55
VHL-202ENST00000345392 SMIM29Q86T20 159 aa11.6□□□□□ -0.55
VHL-202ENST00000345392 NKAPP1Q8N9T2 125 aa11.59□□□□□ -0.55
VHL-202ENST00000345392 Q6ZTC4 211 aa11.59□□□□□ -0.55
VHL-202ENST00000345392 IGKV2D-24A0A075B6R9 120 aa11.58□□□□□ -0.56
VHL-202ENST00000345392 C7orf33Q8WU49 177 aa11.58□□□□□ -0.56
VHL-202ENST00000345392 RPL37AP8A6NKH3 93 aa11.57□□□□□ -0.56
VHL-202ENST00000345392 KCNQ1DNQ9H478 68 aa11.57□□□□□ -0.56
VHL-202ENST00000345392 IGLV5-48A0A075B6I7 105 aa11.56□□□□□ -0.56
VHL-202ENST00000345392 A0A1W2PNM2 257 aa11.56□□□□□ -0.56
VHL-202ENST00000345392 SYCNQ0VAF6 134 aa11.56□□□□□ -0.56
VHL-202ENST00000345392 ESRGQ1W209 222 aa11.55□□□□□ -0.56
VHL-202ENST00000345392 NOTCH1P46531 2555 aa11.54□□□□□ -0.56
VHL-202ENST00000345392 ST20-AS1Q8NBB2 130 aa11.53□□□□□ -0.56
VHL-202ENST00000345392 Q9BRP9 147 aa11.53□□□□□ -0.56
VHL-202ENST00000345392 FAM168BA1KXE4 195 aa11.52□□□□□ -0.57
VHL-202ENST00000345392 LRCOL1A6NCL2 159 aa11.52□□□□□ -0.57
VHL-202ENST00000345392 KRTAP10-11P60412 298 aa11.52□□□□□ -0.57
VHL-202ENST00000345392 C1orf137Q5JT78 98 aa11.52□□□□□ -0.57
VHL-202ENST00000345392 Q6ZRX8 168 aa11.49□□□□□ -0.57
VHL-202ENST00000345392 DHRS4-AS1Q9P1J3 65 aa11.47□□□□□ -0.57
VHL-202ENST00000345392 MDFIQ99750 246 aa11.46□□□□□ -0.57
VHL-202ENST00000345392 ETDCA0A1B0GVM5 59 aa11.46□□□□□ -0.58
VHL-202ENST00000345392 K7EQZ3 153 aa11.46□□□□□ -0.58
VHL-202ENST00000345392 DSCR10P59022 87 aa11.46□□□□□ -0.58
VHL-202ENST00000345392 TNP2Q05952 138 aa11.45□□□□□ -0.58
VHL-202ENST00000345392 Q8NBF4 154 aa11.45□□□□□ -0.58
VHL-202ENST00000345392 KRTAP4-16G5E9R7 235 aaPredicted RBP11.44□□□□□ -0.58
VHL-202ENST00000345392 H3BNG1 76 aa11.44□□□□□ -0.58
VHL-202ENST00000345392 CMYA5Q8N3K9 4069 aa11.44□□□□□ -0.58
VHL-202ENST00000345392 A0A0G2JQZ4 141 aa11.44□□□□□ -0.58
VHL-202ENST00000345392 A0A1W2PNN7 141 aa11.44□□□□□ -0.58
VHL-202ENST00000345392 IGLV1-50A0A075B6I6 118 aa11.43□□□□□ -0.58
VHL-202ENST00000345392 LINC01556Q5JQF7 62 aa11.43□□□□□ -0.58
VHL-202ENST00000345392 hDV103S1A0JD37 113 aa11.42□□□□□ -0.58
VHL-202ENST00000345392 LCE6AA0A183 80 aa11.42□□□□□ -0.58
VHL-202ENST00000345392 PRR4Q16378 134 aa11.41□□□□□ -0.58
VHL-202ENST00000345392 KRTAP7-1Q8IUC3 87 aa11.41□□□□□ -0.58
VHL-202ENST00000345392 C1orf64Q8NEQ6 169 aa11.41□□□□□ -0.58
VHL-202ENST00000345392 CASC10Q5T4H9 136 aa11.4□□□□□ -0.58
VHL-202ENST00000345392 DEFB131BA0A096LNP1 70 aa11.4□□□□□ -0.59
VHL-202ENST00000345392 DEFB116Q30KQ4 102 aa11.4□□□□□ -0.59
VHL-202ENST00000345392 SPRR4Q96PI1 79 aa11.4□□□□□ -0.59
VHL-202ENST00000345392 UBE2BP63146 152 aa11.39□□□□□ -0.59
VHL-202ENST00000345392 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.39□□□□□ -0.59
VHL-202ENST00000345392 A0A1B0GW54 56 aa11.39□□□□□ -0.59
VHL-202ENST00000345392 F8WDY8 70 aa11.38□□□□□ -0.59
VHL-202ENST00000345392 SPRR1AP35321 89 aa11.38□□□□□ -0.59
VHL-202ENST00000345392 ZCCHC13Q8WW36 166 aaKnown RBP11.38□□□□□ -0.59
VHL-202ENST00000345392 PRB2P02812 416 aaPredicted RBP11.37□□□□□ -0.59
VHL-202ENST00000345392 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
VHL-202ENST00000345392 PLA2G2DQ9UNK4 145 aa11.35□□□□□ -0.59
VHL-202ENST00000345392 C1orf195Q5TG92 126 aa11.34□□□□□ -0.59
VHL-202ENST00000345392 C11orf45Q8TAV5 145 aa11.34□□□□□ -0.59
VHL-202ENST00000345392 NBEAL1Q6ZS30 2694 aa11.34□□□□□ -0.59
VHL-202ENST00000345392 MGAM2Q2M2H8 2515 aa11.34□□□□□ -0.59
VHL-202ENST00000345392 HCG22E2RYF7 251 aa11.33□□□□□ -0.59
VHL-202ENST00000345392 MRPL55Q7Z7F7 128 aaKnown RBP11.33□□□□□ -0.59
VHL-202ENST00000345392 LINC00476Q8WZB0 136 aa11.33□□□□□ -0.59
VHL-202ENST00000345392 LYSTQ99698 3801 aa11.33□□□□□ -0.6
VHL-202ENST00000345392 PSCAO43653 123 aa11.33□□□□□ -0.6
VHL-202ENST00000345392 WFDC13Q8IUB5 93 aa11.32□□□□□ -0.6
VHL-202ENST00000345392 IGLV5-37A0A075B6J1 123 aa11.31□□□□□ -0.6
VHL-202ENST00000345392 PSPHP1O15172 72 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms