RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 RPS28P62857 69 aaKnown RBP13.16□□□□□ -0.3
SPG7-202ENST00000341316 COX7BP24311 80 aa13.15□□□□□ -0.3
SPG7-202ENST00000341316 HAMPP81172 84 aa13.15□□□□□ -0.3
SPG7-202ENST00000341316 DPH3Q96FX2 82 aa13.15□□□□□ -0.3
SPG7-202ENST00000341316 LYSTQ99698 3801 aa13.15□□□□□ -0.3
SPG7-202ENST00000341316 ELOF1P60002 83 aaKnown RBP13.14□□□□□ -0.31
SPG7-202ENST00000341316 FAM19A5Q7Z5A7 132 aaPredicted RBP13.14□□□□□ -0.31
SPG7-202ENST00000341316 H3BQ85 93 aa13.14□□□□□ -0.31
SPG7-202ENST00000341316 STAB2Q8WWQ8 2551 aa13.13□□□□□ -0.31
SPG7-202ENST00000341316 COL7A1Q02388 2944 aa13.13□□□□□ -0.31
SPG7-202ENST00000341316 F8WDY8 70 aa13.13□□□□□ -0.31
SPG7-202ENST00000341316 PDE6GP18545 87 aa13.13□□□□□ -0.31
SPG7-202ENST00000341316 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.13□□□□□ -0.31
SPG7-202ENST00000341316 SERTAD4-AS1Q5TG53 156 aa13.1□□□□□ -0.31
SPG7-202ENST00000341316 TRBV7-6A0A0J9YX20 115 aa13.1□□□□□ -0.31
SPG7-202ENST00000341316 C20orf197Q8N268 126 aa13.1□□□□□ -0.31
SPG7-202ENST00000341316 TRBV7-4A0A0J9YYF1 115 aa13.09□□□□□ -0.31
SPG7-202ENST00000341316 DNAH9Q9NYC9 4486 aa13.08□□□□□ -0.32
SPG7-202ENST00000341316 LINC00528Q8N1L1 170 aa13.07□□□□□ -0.32
SPG7-202ENST00000341316 OXTP01178 125 aa13.06□□□□□ -0.32
SPG7-202ENST00000341316 DNAH10Q8IVF4 4471 aa13.06□□□□□ -0.32
SPG7-202ENST00000341316 CXCL6P80162 114 aa13.06□□□□□ -0.32
SPG7-202ENST00000341316 TRAV7A0A075B6U4 112 aa13.04□□□□□ -0.32
SPG7-202ENST00000341316 BCE1O60756 84 aa13.04□□□□□ -0.32
SPG7-202ENST00000341316 TLX1NBP0CAT3 122 aa13.04□□□□□ -0.32
SPG7-202ENST00000341316 SCXQ7RTU7 201 aa13.04□□□□□ -0.32
SPG7-202ENST00000341316 C7orf33Q8WU49 177 aa13.04□□□□□ -0.32
SPG7-202ENST00000341316 FAM168BA1KXE4 195 aa13.02□□□□□ -0.32
SPG7-202ENST00000341316 NKAPP1Q8N9T2 125 aa13.02□□□□□ -0.33
SPG7-202ENST00000341316 KCNQ1DNQ9H478 68 aa13.01□□□□□ -0.33
SPG7-202ENST00000341316 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
SPG7-202ENST00000341316 RMI2Q96E14 147 aa12.97□□□□□ -0.33
SPG7-202ENST00000341316 RPL37AP8A6NKH3 93 aa12.97□□□□□ -0.33
SPG7-202ENST00000341316 MDFIQ99750 246 aa12.97□□□□□ -0.33
SPG7-202ENST00000341316 KRTAP1-5Q9BYS1 174 aa12.97□□□□□ -0.33
SPG7-202ENST00000341316 PLA2G2DQ9UNK4 145 aa12.97□□□□□ -0.33
SPG7-202ENST00000341316 TENM2Q9NT68 2774 aa12.95□□□□□ -0.34
SPG7-202ENST00000341316 H7BZZ5 65 aa12.95□□□□□ -0.34
SPG7-202ENST00000341316 FAM236DA0A1B0GTK5 79 aa12.95□□□□□ -0.34
SPG7-202ENST00000341316 FAM236CP0DP71 79 aa12.95□□□□□ -0.34
SPG7-202ENST00000341316 CSMD3Q7Z407 3707 aa12.94□□□□□ -0.34
SPG7-202ENST00000341316 SNURFQ9Y675 71 aa12.93□□□□□ -0.34
SPG7-202ENST00000341316 DNAH7Q8WXX0 4024 aa12.93□□□□□ -0.34
SPG7-202ENST00000341316 IGLV5-37A0A075B6J1 123 aa12.92□□□□□ -0.34
SPG7-202ENST00000341316 KLKP1Q107X0 134 aa12.92□□□□□ -0.34
SPG7-202ENST00000341316 IGLV1-50A0A075B6I6 118 aa12.91□□□□□ -0.34
SPG7-202ENST00000341316 KRTAP4-16G5E9R7 235 aaPredicted RBP12.91□□□□□ -0.34
SPG7-202ENST00000341316 PLECQ15149 4684 aaKnown RBP12.89□□□□□ -0.35
SPG7-202ENST00000341316 C5orf47Q569G3 176 aa12.88□□□□□ -0.35
SPG7-202ENST00000341316 Q8N9L7 120 aa12.88□□□□□ -0.35
SPG7-202ENST00000341316 DEFB105AQ8NG35 78 aa12.88□□□□□ -0.35
SPG7-202ENST00000341316 Q9BRP9 147 aa12.88□□□□□ -0.35
SPG7-202ENST00000341316 Q6ZRX8 168 aa12.87□□□□□ -0.35
SPG7-202ENST00000341316 Q8N377 158 aa12.87□□□□□ -0.35
SPG7-202ENST00000341316 SPRR1AP35321 89 aa12.87□□□□□ -0.35
SPG7-202ENST00000341316 Q5XG85 94 aa12.87□□□□□ -0.35
SPG7-202ENST00000341316 DYNC2H1Q8NCM8 4307 aaKnown RBP12.87□□□□□ -0.35
SPG7-202ENST00000341316 PRYO14603 147 aa12.86□□□□□ -0.35
SPG7-202ENST00000341316 APLNQ9ULZ1 77 aa12.86□□□□□ -0.35
SPG7-202ENST00000341316 C4orf26Q17RF5 130 aa12.85□□□□□ -0.35
SPG7-202ENST00000341316 MRPL55Q7Z7F7 128 aaKnown RBP12.85□□□□□ -0.35
SPG7-202ENST00000341316 NREPQ16612 68 aa12.85□□□□□ -0.35
SPG7-202ENST00000341316 F8WEM9 126 aa12.84□□□□□ -0.35
SPG7-202ENST00000341316 C3orf84H3BNL1 204 aa12.84□□□□□ -0.35
SPG7-202ENST00000341316 BPY2O14599 106 aa12.83□□□□□ -0.35
SPG7-202ENST00000341316 IGKV4-1P06312 121 aa12.83□□□□□ -0.35
SPG7-202ENST00000341316 ETDCA0A1B0GVM5 59 aa12.82□□□□□ -0.36
SPG7-202ENST00000341316 DHRS4-AS1Q9P1J3 65 aa12.82□□□□□ -0.36
SPG7-202ENST00000341316 SERP1Q9Y6X1 66 aa12.82□□□□□ -0.36
SPG7-202ENST00000341316 UBE2DNLQ8IWF7 75 aa12.81□□□□□ -0.36
SPG7-202ENST00000341316 ST20-AS1Q8NBB2 130 aa12.81□□□□□ -0.36
SPG7-202ENST00000341316 A0A096LNI7 61 aa12.79□□□□□ -0.36
SPG7-202ENST00000341316 EPM2AB3EWF7 344 aa12.79□□□□□ -0.36
SPG7-202ENST00000341316 ERC2-IT1O76042 136 aa12.79□□□□□ -0.36
SPG7-202ENST00000341316 B9D2Q9BPU9 175 aa12.79□□□□□ -0.36
SPG7-202ENST00000341316 IGLV5-48A0A075B6I7 105 aa12.78□□□□□ -0.36
SPG7-202ENST00000341316 PSCAO43653 123 aa12.78□□□□□ -0.36
SPG7-202ENST00000341316 HRCT1Q6UXD1 115 aa12.78□□□□□ -0.36
SPG7-202ENST00000341316 PRKDCP78527 4128 aaKnown RBP12.77□□□□□ -0.37
SPG7-202ENST00000341316 IGKV2-24A0A0C4DH68 120 aa12.77□□□□□ -0.37
SPG7-202ENST00000341316 CNBPP62633 177 aaKnown RBP12.77□□□□□ -0.37
SPG7-202ENST00000341316 A0A1W2PNN7 141 aa12.75□□□□□ -0.37
SPG7-202ENST00000341316 TMEM254Q8TBM7 123 aa12.75□□□□□ -0.37
SPG7-202ENST00000341316 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.74□□□□□ -0.37
SPG7-202ENST00000341316 NDUFC1O43677 76 aa12.74□□□□□ -0.37
SPG7-202ENST00000341316 C16orf90A8MZG2 172 aa12.74□□□□□ -0.37
SPG7-202ENST00000341316 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
SPG7-202ENST00000341316 STARD9Q9P2P6 4700 aa12.73□□□□□ -0.37
SPG7-202ENST00000341316 OCR1Q9BZK8 76 aa12.72□□□□□ -0.37
SPG7-202ENST00000341316 UBE2BP63146 152 aa12.72□□□□□ -0.37
SPG7-202ENST00000341316 A0A1W2PNM2 257 aa12.71□□□□□ -0.37
SPG7-202ENST00000341316 FUSP35637 526 aaKnown RBP eCLIP12.71□□□□□ -0.37
SPG7-202ENST00000341316 TNP2Q05952 138 aa12.71□□□□□ -0.37
SPG7-202ENST00000341316 CHTF8P0CG12 524 aa12.68□□□□□ -0.38
SPG7-202ENST00000341316 C1orf137Q5JT78 98 aa12.68□□□□□ -0.38
SPG7-202ENST00000341316 DNHD1Q96M86 4753 aa12.68□□□□□ -0.38
SPG7-202ENST00000341316 A0A0U1RQV1 116 aa12.65□□□□□ -0.38
SPG7-202ENST00000341316 LRCOL1A6NCL2 159 aa12.65□□□□□ -0.38
SPG7-202ENST00000341316 PRLHP81277 87 aa12.65□□□□□ -0.38
SPG7-202ENST00000341316 KRTAP11-1Q8IUC1 163 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms