RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 TRAV23DV6A0A075B6W5 121 aa11.09□□□□□ -0.63
CLDN4-201ENST00000340958 CHTF8P0CG12 524 aa11.09□□□□□ -0.63
CLDN4-201ENST00000340958 XGP55808 180 aa11.08□□□□□ -0.64
CLDN4-201ENST00000340958 LINC00336Q6ZUF6 198 aa11.08□□□□□ -0.64
CLDN4-201ENST00000340958 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
CLDN4-201ENST00000340958 MT-ATP8P03928 68 aa11.07□□□□□ -0.64
CLDN4-201ENST00000340958 C7orf33Q8WU49 177 aa11.07□□□□□ -0.64
CLDN4-201ENST00000340958 C6orf99Q4VX62 202 aa11.07□□□□□ -0.64
CLDN4-201ENST00000340958 IGLV5-37A0A075B6J1 123 aa11.06□□□□□ -0.64
CLDN4-201ENST00000340958 H0YGX0 51 aa11.06□□□□□ -0.64
CLDN4-201ENST00000340958 MRPL55Q7Z7F7 128 aaKnown RBP11.06□□□□□ -0.64
CLDN4-201ENST00000340958 PKD1P98161 4303 aa11.06□□□□□ -0.64
CLDN4-201ENST00000340958 BIRC6Q9NR09 4857 aa11.05□□□□□ -0.64
CLDN4-201ENST00000340958 RPL37AP8A6NKH3 93 aa11.05□□□□□ -0.64
CLDN4-201ENST00000340958 ZNF73O43830 326 aaPredicted RBP11.04□□□□□ -0.64
CLDN4-201ENST00000340958 DIRC1Q969H9 104 aa11.04□□□□□ -0.64
CLDN4-201ENST00000340958 A0A1W2PNN7 141 aa11.03□□□□□ -0.64
CLDN4-201ENST00000340958 LST1O00453 97 aa11.03□□□□□ -0.64
CLDN4-201ENST00000340958 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
CLDN4-201ENST00000340958 PKHD1P08F94 4074 aa11.03□□□□□ -0.64
CLDN4-201ENST00000340958 KRTAP7-1Q8IUC3 87 aa11.02□□□□□ -0.65
CLDN4-201ENST00000340958 A0A1B0GVY2 172 aa11.01□□□□□ -0.65
CLDN4-201ENST00000340958 SNCGO76070 127 aa11.01□□□□□ -0.65
CLDN4-201ENST00000340958 IGLV1-50A0A075B6I6 118 aa11□□□□□ -0.65
CLDN4-201ENST00000340958 DNAL4O96015 105 aa11□□□□□ -0.65
CLDN4-201ENST00000340958 FAM218AQ96MZ4 157 aa11□□□□□ -0.65
CLDN4-201ENST00000340958 H3BT86 120 aa10.99□□□□□ -0.65
CLDN4-201ENST00000340958 KRTAP10-2P60368 255 aa10.99□□□□□ -0.65
CLDN4-201ENST00000340958 UBE2BP63146 152 aa10.99□□□□□ -0.65
CLDN4-201ENST00000340958 SPACA4Q8TDM5 124 aa10.99□□□□□ -0.65
CLDN4-201ENST00000340958 KCNQ1DNQ9H478 68 aa10.99□□□□□ -0.65
CLDN4-201ENST00000340958 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.99□□□□□ -0.65
CLDN4-201ENST00000340958 DNAH11Q96DT5 4516 aa10.99□□□□□ -0.65
CLDN4-201ENST00000340958 A0A087WYN8 130 aa10.98□□□□□ -0.65
CLDN4-201ENST00000340958 COX7BP24311 80 aa10.98□□□□□ -0.65
CLDN4-201ENST00000340958 PANO1I0J062 215 aa10.98□□□□□ -0.65
CLDN4-201ENST00000340958 TEX49A0A1B0GTD5 131 aa10.97□□□□□ -0.65
CLDN4-201ENST00000340958 PRYO14603 147 aa10.97□□□□□ -0.65
CLDN4-201ENST00000340958 TRACP01848 142 aa10.97□□□□□ -0.65
CLDN4-201ENST00000340958 PHF5AQ7RTV0 110 aaKnown RBP10.96□□□□□ -0.65
CLDN4-201ENST00000340958 TRBV7-6A0A0J9YX20 115 aa10.94□□□□□ -0.66
CLDN4-201ENST00000340958 ETDCA0A1B0GVM5 59 aa10.94□□□□□ -0.66
CLDN4-201ENST00000340958 REG3GQ6UW15 175 aa10.93□□□□□ -0.66
CLDN4-201ENST00000340958 hADV29S1A0JD25 119 aa10.93□□□□□ -0.66
CLDN4-201ENST00000340958 ELOF1P60002 83 aaKnown RBP10.93□□□□□ -0.66
CLDN4-201ENST00000340958 LINC00575Q6W349 94 aa10.93□□□□□ -0.66
CLDN4-201ENST00000340958 A0A1B0GX51 115 aa10.92□□□□□ -0.66
CLDN4-201ENST00000340958 Q6Q795 121 aa10.91□□□□□ -0.66
CLDN4-201ENST00000340958 DYNC1H1Q14204 4646 aaKnown RBP10.89□□□□□ -0.67
CLDN4-201ENST00000340958 BAALC-AS2P0C853 105 aa10.88□□□□□ -0.67
CLDN4-201ENST00000340958 FAM240AA0A1B0GVK7 77 aa10.88□□□□□ -0.67
CLDN4-201ENST00000340958 ORMDL1Q9P0S3 153 aa10.88□□□□□ -0.67
CLDN4-201ENST00000340958 SPRR1AP35321 89 aa10.87□□□□□ -0.67
CLDN4-201ENST00000340958 LINC00528Q8N1L1 170 aa10.87□□□□□ -0.67
CLDN4-201ENST00000340958 FAM19A1Q7Z5A9 133 aa10.86□□□□□ -0.67
CLDN4-201ENST00000340958 PLAC8Q9NZF1 115 aa10.86□□□□□ -0.67
CLDN4-201ENST00000340958 DNAH5Q8TE73 4624 aa10.86□□□□□ -0.67
CLDN4-201ENST00000340958 B5MCH6 92 aa10.86□□□□□ -0.67
CLDN4-201ENST00000340958 Q6ZRX8 168 aa10.86□□□□□ -0.67
CLDN4-201ENST00000340958 ANAPC13Q9BS18 74 aa10.85□□□□□ -0.67
CLDN4-201ENST00000340958 KRTAP10-1P60331 282 aa10.84□□□□□ -0.67
CLDN4-201ENST00000340958 SVIPQ8NHG7 77 aa10.84□□□□□ -0.67
CLDN4-201ENST00000340958 DHRS4-AS1Q9P1J3 65 aa10.84□□□□□ -0.67
CLDN4-201ENST00000340958 INAFM2P0DMQ5 153 aa10.84□□□□□ -0.67
CLDN4-201ENST00000340958 Q6ZQY7 126 aa10.84□□□□□ -0.67
CLDN4-201ENST00000340958 KRTAP4-16G5E9R7 235 aaPredicted RBP10.83□□□□□ -0.68
CLDN4-201ENST00000340958 FAM30AQ9NZY2 134 aa10.83□□□□□ -0.68
CLDN4-201ENST00000340958 KIAA1109Q2LD37 5005 aa10.82□□□□□ -0.68
CLDN4-201ENST00000340958 EPM2AB3EWF7 344 aa10.82□□□□□ -0.68
CLDN4-201ENST00000340958 KRTAP11-1Q8IUC1 163 aa10.82□□□□□ -0.68
CLDN4-201ENST00000340958 LRP1BQ9NZR2 4599 aa10.82□□□□□ -0.68
CLDN4-201ENST00000340958 GHRHP01286 108 aa10.81□□□□□ -0.68
CLDN4-201ENST00000340958 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.81□□□□□ -0.68
CLDN4-201ENST00000340958 UBE2AP49459 152 aa10.81□□□□□ -0.68
CLDN4-201ENST00000340958 PRLHP81277 87 aa10.81□□□□□ -0.68
CLDN4-201ENST00000340958 TMEM256-PLSCR3K7ERE1 68 aa10.8□□□□□ -0.68
CLDN4-201ENST00000340958 NDUFV3P56181 108 aaKnown RBP10.8□□□□□ -0.68
CLDN4-201ENST00000340958 CIRBP-AS1Q8TBR5 109 aa10.79□□□□□ -0.68
CLDN4-201ENST00000340958 Q9BRP9 147 aa10.79□□□□□ -0.68
CLDN4-201ENST00000340958 SCXQ7RTU7 201 aa10.78□□□□□ -0.68
CLDN4-201ENST00000340958 H3BQ85 93 aa10.77□□□□□ -0.68
CLDN4-201ENST00000340958 BCE1O60756 84 aa10.77□□□□□ -0.68
CLDN4-201ENST00000340958 ACYP1P07311 99 aa10.77□□□□□ -0.68
CLDN4-201ENST00000340958 HIGD2AQ9BW72 106 aa10.77□□□□□ -0.68
CLDN4-201ENST00000340958 HAMPP81172 84 aa10.77□□□□□ -0.69
CLDN4-201ENST00000340958 Q6ZSA8 131 aa10.77□□□□□ -0.69
CLDN4-201ENST00000340958 DEFB105AQ8NG35 78 aa10.77□□□□□ -0.69
CLDN4-201ENST00000340958 TRBV7-7A0A0K0K1E9 115 aa10.75□□□□□ -0.69
CLDN4-201ENST00000340958 C1orf137Q5JT78 98 aa10.74□□□□□ -0.69
CLDN4-201ENST00000340958 PSORS1C2Q9UIG4 136 aa10.74□□□□□ -0.69
CLDN4-201ENST00000340958 SMCR5Q8TEV8 140 aa10.74□□□□□ -0.69
CLDN4-201ENST00000340958 LAMTOR3Q9UHA4 124 aa10.74□□□□□ -0.69
CLDN4-201ENST00000340958 HERC2O95714 4834 aa10.73□□□□□ -0.69
CLDN4-201ENST00000340958 RYR1P21817 5038 aa10.72□□□□□ -0.69
CLDN4-201ENST00000340958 H0Y9J4 135 aa10.72□□□□□ -0.69
CLDN4-201ENST00000340958 ERC2-IT1O76042 136 aa10.72□□□□□ -0.69
CLDN4-201ENST00000340958 APOBP04114 4563 aaKnown RBP10.71□□□□□ -0.69
CLDN4-201ENST00000340958 ST20-AS1Q8NBB2 130 aa10.71□□□□□ -0.69
CLDN4-201ENST00000340958 IMUPQ9GZP8 106 aa10.71□□□□□ -0.69
CLDN4-201ENST00000340958 HSPG2P98160 4391 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms