RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ERC2-IT1O76042 136 aa8.87□□□□□ -0.99
PRKN-201ENST00000338468 Q9BRP9 147 aa8.87□□□□□ -0.99
PRKN-201ENST00000338468 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
PRKN-201ENST00000338468 TRAV23DV6A0A075B6W5 121 aa8.86□□□□□ -0.99
PRKN-201ENST00000338468 A0A0U1RQV1 116 aa8.86□□□□□ -0.99
PRKN-201ENST00000338468 S100A12P80511 92 aa8.86□□□□□ -0.99
PRKN-201ENST00000338468 Q6ZRX8 168 aa8.86□□□□□ -0.99
PRKN-201ENST00000338468 PCP2Q8IVA1 136 aa8.86□□□□□ -0.99
PRKN-201ENST00000338468 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
PRKN-201ENST00000338468 LINC00304Q8N9R0 145 aa8.85□□□□□ -0.99
PRKN-201ENST00000338468 SPANXDQ9BXN6 97 aa8.85□□□□□ -0.99
PRKN-201ENST00000338468 ZNF73O43830 326 aaPredicted RBP8.84□□□□□ -0.99
PRKN-201ENST00000338468 MUC2Q02817 5179 aa8.84□□□□□ -0.99
PRKN-201ENST00000338468 LINC00483Q53H64 154 aa8.84□□□□□ -0.99
PRKN-201ENST00000338468 PPDPFQ9H3Y8 114 aa8.84□□□□□ -0.99
PRKN-201ENST00000338468 S100A2P29034 98 aa8.83□□□□□ -1
PRKN-201ENST00000338468 AKR1D1P51857 326 aa8.83□□□□□ -1
PRKN-201ENST00000338468 PRR4Q16378 134 aa8.83□□□□□ -1
PRKN-201ENST00000338468 SCGB1D4Q6XE38 83 aa8.83□□□□□ -1
PRKN-201ENST00000338468 S100A6P06703 90 aa8.8□□□□□ -1
PRKN-201ENST00000338468 SNRPEP62304 92 aaKnown RBP8.8□□□□□ -1
PRKN-201ENST00000338468 GAGE2AQ6NT46 116 aa8.8□□□□□ -1
PRKN-201ENST00000338468 OR13C6PQ8NH95 151 aa8.8□□□□□ -1
PRKN-201ENST00000338468 C5orf52A6NGY3 159 aa8.78□□□□□ -1
PRKN-201ENST00000338468 IFITM1P13164 125 aa8.77□□□□□ -1.01
PRKN-201ENST00000338468 JOSD1Q15040 202 aaPredicted RBP8.77□□□□□ -1.01
PRKN-201ENST00000338468 Q6ZVH6 145 aa8.77□□□□□ -1.01
PRKN-201ENST00000338468 MUSTN1Q8IVN3 82 aa8.77□□□□□ -1.01
PRKN-201ENST00000338468 LINC00518Q8N0U6 118 aa8.77□□□□□ -1.01
PRKN-201ENST00000338468 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
PRKN-201ENST00000338468 CBY1Q9Y3M2 126 aa8.77□□□□□ -1.01
PRKN-201ENST00000338468 CTAG1AP78358 180 aa8.76□□□□□ -1.01
PRKN-201ENST00000338468 ST20-AS1Q8NBB2 130 aa8.76□□□□□ -1.01
PRKN-201ENST00000338468 Q8NBF4 154 aa8.76□□□□□ -1.01
PRKN-201ENST00000338468 SPAG11AQ6PDA7 123 aa8.74□□□□□ -1.01
PRKN-201ENST00000338468 COPS9Q8WXC6 57 aa8.74□□□□□ -1.01
PRKN-201ENST00000338468 KRTAP9-6A0A140TA67 174 aa8.73□□□□□ -1.01
PRKN-201ENST00000338468 HINT1P49773 126 aaPredicted RBP8.73□□□□□ -1.01
PRKN-201ENST00000338468 ELOF1P60002 83 aaKnown RBP8.73□□□□□ -1.01
PRKN-201ENST00000338468 C6orf99Q4VX62 202 aa8.73□□□□□ -1.01
PRKN-201ENST00000338468 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
PRKN-201ENST00000338468 HSBP1L1C9JCN9 74 aa8.72□□□□□ -1.01
PRKN-201ENST00000338468 MOBPQ13875 183 aa8.72□□□□□ -1.01
PRKN-201ENST00000338468 SCGB1D1O95968 90 aa8.71□□□□□ -1.02
PRKN-201ENST00000338468 COX7BP24311 80 aa8.71□□□□□ -1.02
PRKN-201ENST00000338468 DHRS4-AS1Q9P1J3 65 aa8.7□□□□□ -1.02
PRKN-201ENST00000338468 A6NDN8 102 aa8.69□□□□□ -1.02
PRKN-201ENST00000338468 SPRR1BP22528 89 aa8.69□□□□□ -1.02
PRKN-201ENST00000338468 SSBP3-AS1Q7Z2R9 100 aa8.69□□□□□ -1.02
PRKN-201ENST00000338468 TRBV7-6A0A0J9YX20 115 aa8.68□□□□□ -1.02
PRKN-201ENST00000338468 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
PRKN-201ENST00000338468 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
PRKN-201ENST00000338468 SPINK1P00995 79 aa8.67□□□□□ -1.02
PRKN-201ENST00000338468 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
PRKN-201ENST00000338468 LCE2DQ5TA82 110 aaPredicted RBP8.66□□□□□ -1.02
PRKN-201ENST00000338468 SMIM11BQ8TCY0 68 aa8.66□□□□□ -1.02
PRKN-201ENST00000338468 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.02
PRKN-201ENST00000338468 TRAV13-2A0A0B4J235 113 aa8.65□□□□□ -1.02
PRKN-201ENST00000338468 A0A1B0GWB2 263 aa8.65□□□□□ -1.02
PRKN-201ENST00000338468 A4D1N5 150 aa8.65□□□□□ -1.02
PRKN-201ENST00000338468 COX8AP10176 69 aa8.65□□□□□ -1.02
PRKN-201ENST00000338468 TPRXLQ17RH7 258 aa8.64□□□□□ -1.03
PRKN-201ENST00000338468 C9orf153Q5TBE3 101 aa8.64□□□□□ -1.03
PRKN-201ENST00000338468 MUC17Q685J3 4493 aa8.63□□□□□ -1.03
PRKN-201ENST00000338468 DLEU1O43261 78 aa8.62□□□□□ -1.03
PRKN-201ENST00000338468 LINC01547P58512 204 aaPredicted RBP8.62□□□□□ -1.03
PRKN-201ENST00000338468 RPS29P62273 56 aaKnown RBP8.62□□□□□ -1.03
PRKN-201ENST00000338468 Q8N377 158 aa8.62□□□□□ -1.03
PRKN-201ENST00000338468 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
PRKN-201ENST00000338468 SMIM29Q86T20 159 aa8.6□□□□□ -1.03
PRKN-201ENST00000338468 DEFB105AQ8NG35 78 aa8.6□□□□□ -1.03
PRKN-201ENST00000338468 IGLV5-48A0A075B6I7 105 aa8.59□□□□□ -1.03
PRKN-201ENST00000338468 TEX49A0A1B0GTD5 131 aa8.59□□□□□ -1.03
PRKN-201ENST00000338468 TAL2Q16559 108 aa8.59□□□□□ -1.03
PRKN-201ENST00000338468 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
PRKN-201ENST00000338468 C14orf144Q96I85 54 aa8.59□□□□□ -1.03
PRKN-201ENST00000338468 PAM16Q9Y3D7 125 aa8.59□□□□□ -1.03
PRKN-201ENST00000338468 Q1RN00 199 aa8.58□□□□□ -1.04
PRKN-201ENST00000338468 SPATA45Q537H7 98 aa8.58□□□□□ -1.04
PRKN-201ENST00000338468 HIST1H4GQ99525 98 aa8.58□□□□□ -1.04
PRKN-201ENST00000338468 LAMTOR3Q9UHA4 124 aa8.58□□□□□ -1.04
PRKN-201ENST00000338468 C12orf57Q99622 126 aa8.57□□□□□ -1.04
PRKN-201ENST00000338468 KRTAP13-3Q3SY46 172 aa8.56□□□□□ -1.04
PRKN-201ENST00000338468 C2orf91Q6ZV80 131 aa8.56□□□□□ -1.04
PRKN-201ENST00000338468 CDIP1Q9H305 208 aa8.56□□□□□ -1.04
PRKN-201ENST00000338468 SLC25A20O43772 301 aa8.55□□□□□ -1.04
PRKN-201ENST00000338468 LINC00575Q6W349 94 aa8.55□□□□□ -1.04
PRKN-201ENST00000338468 VAMP8Q9BV40 100 aa8.55□□□□□ -1.04
PRKN-201ENST00000338468 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
PRKN-201ENST00000338468 NHP2Q9NX24 153 aaKnown RBP8.53□□□□□ -1.04
PRKN-201ENST00000338468 CFC1BP0CG36 223 aa8.52□□□□□ -1.05
PRKN-201ENST00000338468 CFC1P0CG37 223 aa8.52□□□□□ -1.05
PRKN-201ENST00000338468 VAMP3Q15836 100 aa8.52□□□□□ -1.05
PRKN-201ENST00000338468 HRCT1Q6UXD1 115 aa8.52□□□□□ -1.05
PRKN-201ENST00000338468 PYY3Q5JQD4 70 aa8.51□□□□□ -1.05
PRKN-201ENST00000338468 A0A0G2JQZ4 141 aa8.5□□□□□ -1.05
PRKN-201ENST00000338468 PRO1933Q9H354 126 aa8.5□□□□□ -1.05
PRKN-201ENST00000338468 hADV29S1A0JD25 119 aa8.49□□□□□ -1.05
PRKN-201ENST00000338468 CD164Q04900 197 aa8.49□□□□□ -1.05
PRKN-201ENST00000338468 Q6ZQY7 126 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms