RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PMCHL2Q9BQD1 86 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 HSPB8Q9UJY1 196 aa6.18□□□□□ -1.42
CAPN3-202ENST00000337571 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-202ENST00000337571 BOD1L2Q8IYS8 172 aa6.17□□□□□ -1.42
CAPN3-202ENST00000337571 Q8NDZ9 215 aa6.17□□□□□ -1.42
CAPN3-202ENST00000337571 SMIM13P0DJ93 91 aa6.16□□□□□ -1.42
CAPN3-202ENST00000337571 HERV-K104P63124 156 aa6.16□□□□□ -1.42
CAPN3-202ENST00000337571 ATOH7Q8N100 152 aa6.16□□□□□ -1.42
CAPN3-202ENST00000337571 MAP1LC3CQ9BXW4 147 aa6.16□□□□□ -1.42
CAPN3-202ENST00000337571 PRYO14603 147 aa6.15□□□□□ -1.42
CAPN3-202ENST00000337571 TPRXLQ17RH7 258 aa6.15□□□□□ -1.42
CAPN3-202ENST00000337571 C3orf22Q8N5N4 141 aa6.15□□□□□ -1.42
CAPN3-202ENST00000337571 SPRR4Q96PI1 79 aa6.15□□□□□ -1.42
CAPN3-202ENST00000337571 MYMXA0A1B0GTQ4 84 aa6.14□□□□□ -1.43
CAPN3-202ENST00000337571 ETDCA0A1B0GVM5 59 aa6.14□□□□□ -1.43
CAPN3-202ENST00000337571 NCR3O14931 201 aa6.14□□□□□ -1.43
CAPN3-202ENST00000337571 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
CAPN3-202ENST00000337571 LINC00337Q8N6G1 96 aa6.14□□□□□ -1.43
CAPN3-202ENST00000337571 PRO1933Q9H354 126 aa6.14□□□□□ -1.43
CAPN3-202ENST00000337571 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
CAPN3-202ENST00000337571 H0Y8G0 127 aa6.13□□□□□ -1.43
CAPN3-202ENST00000337571 SMCR5Q8TEV8 140 aa6.13□□□□□ -1.43
CAPN3-202ENST00000337571 PPDPFQ9H3Y8 114 aa6.13□□□□□ -1.43
CAPN3-202ENST00000337571 NDUFA12Q9UI09 145 aa6.13□□□□□ -1.43
CAPN3-202ENST00000337571 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
CAPN3-202ENST00000337571 KCNQ1DNQ9H478 68 aa6.12□□□□□ -1.43
CAPN3-202ENST00000337571 PAM16Q9Y3D7 125 aa6.11□□□□□ -1.43
CAPN3-202ENST00000337571 TRBV10-3A0A0K0K1G6 114 aa6.1□□□□□ -1.43
CAPN3-202ENST00000337571 SPRR1AP35321 89 aa6.1□□□□□ -1.43
CAPN3-202ENST00000337571 SPATA45Q537H7 98 aa6.1□□□□□ -1.43
CAPN3-202ENST00000337571 FP248Q71RG6 208 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-202ENST00000337571 DAND5Q8N907 189 aa6.1□□□□□ -1.43
CAPN3-202ENST00000337571 Q8NBF4 154 aa6.1□□□□□ -1.43
CAPN3-202ENST00000337571 MIEN1Q9BRT3 115 aa6.1□□□□□ -1.43
CAPN3-202ENST00000337571 C20orf202A1L168 122 aa6.09□□□□□ -1.43
CAPN3-202ENST00000337571 LEPROTO15243 131 aa6.09□□□□□ -1.43
CAPN3-202ENST00000337571 SPINK1P00995 79 aa6.09□□□□□ -1.43
CAPN3-202ENST00000337571 PLNP26678 52 aa6.09□□□□□ -1.43
CAPN3-202ENST00000337571 GAGE2AQ6NT46 116 aa6.09□□□□□ -1.43
CAPN3-202ENST00000337571 VAMP8Q9BV40 100 aa6.09□□□□□ -1.43
CAPN3-202ENST00000337571 PCP4L1A6NKN8 68 aa6.08□□□□□ -1.44
CAPN3-202ENST00000337571 DPM2O94777 84 aa6.08□□□□□ -1.44
CAPN3-202ENST00000337571 IGKCP01834 107 aa6.08□□□□□ -1.44
CAPN3-202ENST00000337571 DDTP30046 118 aa6.08□□□□□ -1.44
CAPN3-202ENST00000337571 HERVK_113P61574 105 aa6.08□□□□□ -1.44
CAPN3-202ENST00000337571 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
CAPN3-202ENST00000337571 B5MCH6 92 aa6.07□□□□□ -1.44
CAPN3-202ENST00000337571 KRTAP4-16G5E9R7 235 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-202ENST00000337571 S100A7L2Q5SY68 101 aa6.07□□□□□ -1.44
CAPN3-202ENST00000337571 IGLV9-49A0A0B4J1Y8 123 aa6.06□□□□□ -1.44
CAPN3-202ENST00000337571 TRBV10-2A0A0K0K1G8 114 aa6.06□□□□□ -1.44
CAPN3-202ENST00000337571 J3QQQ9 107 aa6.06□□□□□ -1.44
CAPN3-202ENST00000337571 LGALS3P17931 250 aaKnown RBP6.06□□□□□ -1.44
CAPN3-202ENST00000337571 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
CAPN3-202ENST00000337571 C14orf144Q96I85 54 aa6.06□□□□□ -1.44
CAPN3-202ENST00000337571 LOC107984156A0A0G2JMH3 177 aa6.05□□□□□ -1.44
CAPN3-202ENST00000337571 NMUP48645 174 aa6.05□□□□□ -1.44
CAPN3-202ENST00000337571 SSBP3-AS1Q7Z2R9 100 aa6.05□□□□□ -1.44
CAPN3-202ENST00000337571 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
CAPN3-202ENST00000337571 ARL17AQ8IVW1 177 aa6.05□□□□□ -1.44
CAPN3-202ENST00000337571 TTTY13Q9BZ97 58 aa6.05□□□□□ -1.44
CAPN3-202ENST00000337571 SPANXB1Q9NS25 103 aaPredicted RBP6.05□□□□□ -1.44
CAPN3-202ENST00000337571 TSPEAR-AS2P59090 65 aa6.04□□□□□ -1.44
CAPN3-202ENST00000337571 MOBPQ13875 183 aa6.04□□□□□ -1.44
CAPN3-202ENST00000337571 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
CAPN3-202ENST00000337571 NDUFC2O95298 119 aa6.03□□□□□ -1.44
CAPN3-202ENST00000337571 COX8AP10176 69 aa6.03□□□□□ -1.44
CAPN3-202ENST00000337571 HINT1P49773 126 aaPredicted RBP6.03□□□□□ -1.44
CAPN3-202ENST00000337571 Q6ZRX8 168 aa6.03□□□□□ -1.44
CAPN3-202ENST00000337571 C2orf91Q6ZV80 131 aa6.03□□□□□ -1.44
CAPN3-202ENST00000337571 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
CAPN3-202ENST00000337571 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
CAPN3-202ENST00000337571 FAT4Q6V0I7 4981 aa6.03□□□□□ -1.44
CAPN3-202ENST00000337571 E9PLD3 99 aa6.02□□□□□ -1.45
CAPN3-202ENST00000337571 SLC25A20O43772 301 aa6.02□□□□□ -1.45
CAPN3-202ENST00000337571 ERC2-IT1O76042 136 aa6.02□□□□□ -1.45
CAPN3-202ENST00000337571 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.45
CAPN3-202ENST00000337571 Q9BRP9 147 aa6.02□□□□□ -1.45
CAPN3-202ENST00000337571 TRAV23DV6A0A075B6W5 121 aa6.01□□□□□ -1.45
CAPN3-202ENST00000337571 TSTD3H0UI37 97 aa6.01□□□□□ -1.45
CAPN3-202ENST00000337571 DLEU1O43261 78 aa6.01□□□□□ -1.45
CAPN3-202ENST00000337571 IGLV6-57P01721 117 aa6.01□□□□□ -1.45
CAPN3-202ENST00000337571 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
CAPN3-202ENST00000337571 RPS29P62273 56 aaKnown RBP6.01□□□□□ -1.45
CAPN3-202ENST00000337571 C9orf153Q5TBE3 101 aa6.01□□□□□ -1.45
CAPN3-202ENST00000337571 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
CAPN3-202ENST00000337571 UQCR10Q9UDW1 63 aa6.01□□□□□ -1.45
CAPN3-202ENST00000337571 NPC2P61916 151 aa6□□□□□ -1.45
CAPN3-202ENST00000337571 MUC17Q685J3 4493 aa6□□□□□ -1.45
CAPN3-202ENST00000337571 HSBP1L1C9JCN9 74 aa5.99□□□□□ -1.45
CAPN3-202ENST00000337571 ZNF73O43830 326 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-202ENST00000337571 ASB16-AS1Q495Z4 193 aa5.99□□□□□ -1.45
CAPN3-202ENST00000337571 SLC25A34Q6PIV7 304 aa5.99□□□□□ -1.45
CAPN3-202ENST00000337571 Q8N377 158 aa5.99□□□□□ -1.45
CAPN3-202ENST00000337571 A0A0J9YXY3 114 aa5.98□□□□□ -1.45
CAPN3-202ENST00000337571 LINC01547P58512 204 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-202ENST00000337571 ADAMTSL4-AS1Q5T5F5 129 aa5.98□□□□□ -1.45
CAPN3-202ENST00000337571 OR13C6PQ8NH95 151 aa5.98□□□□□ -1.45
CAPN3-202ENST00000337571 SNHG12Q9BXW3 62 aa5.97□□□□□ -1.45
CAPN3-202ENST00000337571 SOSTDC1Q6X4U4 206 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms