RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 HCG22E2RYF7 251 aa9.04□□□□□ -0.96
COL2A1-201ENST00000337299 ITPR2Q14571 2701 aa9.03□□□□□ -0.96
COL2A1-201ENST00000337299 ASH1LQ9NR48 2969 aaKnown RBP9.03□□□□□ -0.96
COL2A1-201ENST00000337299 CR1P17927 2039 aa9.02□□□□□ -0.96
COL2A1-201ENST00000337299 C6orf48Q9UBA6 75 aa9.02□□□□□ -0.96
COL2A1-201ENST00000337299 NBEAL2Q6ZNJ1 2754 aa9.02□□□□□ -0.97
COL2A1-201ENST00000337299 LYPD5Q6UWN5 251 aa9.02□□□□□ -0.97
COL2A1-201ENST00000337299 CASC2Q6XLA1 102 aa9.02□□□□□ -0.97
COL2A1-201ENST00000337299 FP248Q71RG6 208 aaPredicted RBP9.02□□□□□ -0.97
COL2A1-201ENST00000337299 C1orf64Q8NEQ6 169 aa9.02□□□□□ -0.97
COL2A1-201ENST00000337299 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.01□□□□□ -0.97
COL2A1-201ENST00000337299 IGLV1-51P01701 117 aa9□□□□□ -0.97
COL2A1-201ENST00000337299 RELNP78509 3460 aa9□□□□□ -0.97
COL2A1-201ENST00000337299 ZANQ9Y493 2812 aa9□□□□□ -0.97
COL2A1-201ENST00000337299 FSHBP01225 129 aa8.99□□□□□ -0.97
COL2A1-201ENST00000337299 C22orf24Q9Y442 160 aa8.99□□□□□ -0.97
COL2A1-201ENST00000337299 OBSCN-AS1Q96MR7 158 aa8.98□□□□□ -0.97
COL2A1-201ENST00000337299 SPINK6Q6UWN8 80 aa8.98□□□□□ -0.97
COL2A1-201ENST00000337299 ELOF1P60002 83 aaKnown RBP8.98□□□□□ -0.97
COL2A1-201ENST00000337299 DEFB131BA0A096LNP1 70 aa8.97□□□□□ -0.97
COL2A1-201ENST00000337299 SPAG11AQ6PDA7 123 aa8.97□□□□□ -0.97
COL2A1-201ENST00000337299 TRAV22A0A0B4J277 110 aa8.96□□□□□ -0.98
COL2A1-201ENST00000337299 FAM229BQ4G0N7 80 aa8.96□□□□□ -0.98
COL2A1-201ENST00000337299 LIMD2Q9BT23 127 aa8.96□□□□□ -0.98
COL2A1-201ENST00000337299 C11orf45Q8TAV5 145 aa8.95□□□□□ -0.98
COL2A1-201ENST00000337299 ST20-AS1Q8NBB2 130 aa8.94□□□□□ -0.98
COL2A1-201ENST00000337299 UTP20O75691 2785 aaKnown RBP8.94□□□□□ -0.98
COL2A1-201ENST00000337299 hDV103S1A0JD37 113 aa8.94□□□□□ -0.98
COL2A1-201ENST00000337299 C7orf33Q8WU49 177 aa8.94□□□□□ -0.98
COL2A1-201ENST00000337299 A0A096LNT2 108 aa8.94□□□□□ -0.98
COL2A1-201ENST00000337299 K7EQZ3 153 aa8.94□□□□□ -0.98
COL2A1-201ENST00000337299 IGLV6-57P01721 117 aa8.94□□□□□ -0.98
COL2A1-201ENST00000337299 PRLHP81277 87 aa8.93□□□□□ -0.98
COL2A1-201ENST00000337299 CRYBG3Q68DQ2 2970 aa8.93□□□□□ -0.98
COL2A1-201ENST00000337299 RPL37AP61513 92 aaKnown RBP8.93□□□□□ -0.98
COL2A1-201ENST00000337299 IGLV9-49A0A0B4J1Y8 123 aa8.92□□□□□ -0.98
COL2A1-201ENST00000337299 TRBV7-4A0A0J9YYF1 115 aa8.92□□□□□ -0.98
COL2A1-201ENST00000337299 ERC2-IT1O76042 136 aa8.91□□□□□ -0.98
COL2A1-201ENST00000337299 Q8NBF4 154 aa8.91□□□□□ -0.98
COL2A1-201ENST00000337299 A0A0G2JQZ4 141 aa8.9□□□□□ -0.98
COL2A1-201ENST00000337299 A0A1W2PNN7 141 aa8.9□□□□□ -0.98
COL2A1-201ENST00000337299 BAHCC1Q9P281 2608 aa8.9□□□□□ -0.99
COL2A1-201ENST00000337299 Q9BRP9 147 aa8.88□□□□□ -0.99
COL2A1-201ENST00000337299 LINC00167Q96N53 147 aa8.88□□□□□ -0.99
COL2A1-201ENST00000337299 ZFHX4Q86UP3 3567 aa8.88□□□□□ -0.99
COL2A1-201ENST00000337299 CD164Q04900 197 aa8.88□□□□□ -0.99
COL2A1-201ENST00000337299 REG3GQ6UW15 175 aa8.88□□□□□ -0.99
COL2A1-201ENST00000337299 Q6ZTC4 211 aa8.88□□□□□ -0.99
COL2A1-201ENST00000337299 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
COL2A1-201ENST00000337299 IGHV6-1A0A0B4J1U7 121 aa8.87□□□□□ -0.99
COL2A1-201ENST00000337299 VPREB1P12018 145 aa8.86□□□□□ -0.99
COL2A1-201ENST00000337299 NF1P21359 2839 aa8.84□□□□□ -0.99
COL2A1-201ENST00000337299 LINC00476Q8WZB0 136 aa8.84□□□□□ -0.99
COL2A1-201ENST00000337299 C16orf95Q9H693 158 aa8.84□□□□□ -0.99
COL2A1-201ENST00000337299 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
COL2A1-201ENST00000337299 X6R8D5 127 aa8.83□□□□□ -1
COL2A1-201ENST00000337299 CELSR2Q9HCU4 2923 aa8.83□□□□□ -1
COL2A1-201ENST00000337299 OCR1Q9BZK8 76 aa8.83□□□□□ -1
COL2A1-201ENST00000337299 Q6ZRP5 223 aa8.82□□□□□ -1
COL2A1-201ENST00000337299 GIG44P09565 113 aaPredicted RBP8.81□□□□□ -1
COL2A1-201ENST00000337299 RETNLBQ9BQ08 111 aa8.81□□□□□ -1
COL2A1-201ENST00000337299 EPM2AB3EWF7 344 aa8.81□□□□□ -1
COL2A1-201ENST00000337299 Q6ZRX8 168 aa8.8□□□□□ -1
COL2A1-201ENST00000337299 Q8N377 158 aa8.8□□□□□ -1
COL2A1-201ENST00000337299 Q8NDZ9 215 aa8.8□□□□□ -1
COL2A1-201ENST00000337299 PRR15Q8IV56 129 aa8.79□□□□□ -1
COL2A1-201ENST00000337299 FAM168BA1KXE4 195 aa8.78□□□□□ -1
COL2A1-201ENST00000337299 COA5Q86WW8 74 aa8.78□□□□□ -1
COL2A1-201ENST00000337299 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
COL2A1-201ENST00000337299 DCHS2Q6V1P9 2916 aa8.78□□□□□ -1
COL2A1-201ENST00000337299 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1
COL2A1-201ENST00000337299 A0A1W2PNM2 257 aa8.76□□□□□ -1.01
COL2A1-201ENST00000337299 CSNK1G2-AS1Q8NCQ2 148 aa8.76□□□□□ -1.01
COL2A1-201ENST00000337299 FBN2P35556 2912 aa8.74□□□□□ -1.01
COL2A1-201ENST00000337299 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
COL2A1-201ENST00000337299 SPINK1P00995 79 aa8.72□□□□□ -1.01
COL2A1-201ENST00000337299 APCP25054 2843 aa8.72□□□□□ -1.01
COL2A1-201ENST00000337299 NIPBLQ6KC79 2804 aaeCLIP8.72□□□□□ -1.01
COL2A1-201ENST00000337299 LOC101927531A0A1B0GV80 90 aa8.71□□□□□ -1.01
COL2A1-201ENST00000337299 ATP11AUNQ6ZP68 121 aa8.71□□□□□ -1.01
COL2A1-201ENST00000337299 Q1T7F1 81 aa8.71□□□□□ -1.02
COL2A1-201ENST00000337299 A0A1B0GW54 56 aa8.7□□□□□ -1.02
COL2A1-201ENST00000337299 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
COL2A1-201ENST00000337299 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
COL2A1-201ENST00000337299 KRTAP24-1Q3LI83 254 aa8.7□□□□□ -1.02
COL2A1-201ENST00000337299 KRTAP1-3Q8IUG1 177 aa8.69□□□□□ -1.02
COL2A1-201ENST00000337299 MDFIQ99750 246 aa8.69□□□□□ -1.02
COL2A1-201ENST00000337299 IGLV8-61A0A075B6I0 122 aa8.68□□□□□ -1.02
COL2A1-201ENST00000337299 KCNQ1DNQ9H478 68 aa8.67□□□□□ -1.02
COL2A1-201ENST00000337299 A0A1B0GU69 56 aa8.67□□□□□ -1.02
COL2A1-201ENST00000337299 IGFL1Q6UW32 110 aa8.67□□□□□ -1.02
COL2A1-201ENST00000337299 HIVEP1P15822 2718 aa8.66□□□□□ -1.02
COL2A1-201ENST00000337299 C7orf65Q6ZTY9 151 aa8.66□□□□□ -1.02
COL2A1-201ENST00000337299 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
COL2A1-201ENST00000337299 H3BPC8 53 aa8.66□□□□□ -1.02
COL2A1-201ENST00000337299 C14orf177Q52M58 125 aa8.65□□□□□ -1.02
COL2A1-201ENST00000337299 HRNRQ86YZ3 2850 aaPredicted RBP8.65□□□□□ -1.02
COL2A1-201ENST00000337299 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
COL2A1-201ENST00000337299 DSCR10P59022 87 aa8.64□□□□□ -1.03
COL2A1-201ENST00000337299 Q8NAQ8 132 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms