RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 IGLV6-57P01721 117 aa4.25□□□□□ -1.73
CSMD1-201ENST00000335551 K7EQZ3 153 aa4.25□□□□□ -1.73
CSMD1-201ENST00000335551 CENPFP49454 3210 aa4.25□□□□□ -1.73
CSMD1-201ENST00000335551 C16orf90A8MZG2 172 aa4.24□□□□□ -1.73
CSMD1-201ENST00000335551 Q1T7F1 81 aa4.24□□□□□ -1.73
CSMD1-201ENST00000335551 NSD1Q96L73 2696 aaPredicted RBP4.23□□□□□ -1.73
CSMD1-201ENST00000335551 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
CSMD1-201ENST00000335551 WWC2-AS2Q96NR7 200 aa4.23□□□□□ -1.73
CSMD1-201ENST00000335551 C9orf129Q5T035 196 aaKnown RBP4.23□□□□□ -1.73
CSMD1-201ENST00000335551 GVQW2A0A096LPI5 108 aaPredicted RBP4.22□□□□□ -1.73
CSMD1-201ENST00000335551 FHL3Q13643 280 aa4.22□□□□□ -1.73
CSMD1-201ENST00000335551 TEP1Q99973 2627 aaKnown RBP4.22□□□□□ -1.73
CSMD1-201ENST00000335551 ST20-AS1Q8NBB2 130 aa4.22□□□□□ -1.73
CSMD1-201ENST00000335551 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
CSMD1-201ENST00000335551 RPL37AP61513 92 aaKnown RBP4.21□□□□□ -1.73
CSMD1-201ENST00000335551 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
CSMD1-201ENST00000335551 Q6ZRP5 223 aa4.21□□□□□ -1.74
CSMD1-201ENST00000335551 Q96NJ1 140 aa4.21□□□□□ -1.74
CSMD1-201ENST00000335551 C16orf95Q9H693 158 aa4.2□□□□□ -1.74
CSMD1-201ENST00000335551 UTP20O75691 2785 aaKnown RBP4.2□□□□□ -1.74
CSMD1-201ENST00000335551 H3BNG1 76 aa4.2□□□□□ -1.74
CSMD1-201ENST00000335551 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
CSMD1-201ENST00000335551 LITAFQ99732 161 aa4.19□□□□□ -1.74
CSMD1-201ENST00000335551 LINC00315P59091 139 aa4.19□□□□□ -1.74
CSMD1-201ENST00000335551 TYMSOSQ8TAI1 123 aa4.19□□□□□ -1.74
CSMD1-201ENST00000335551 WISP2O76076 250 aa4.19□□□□□ -1.74
CSMD1-201ENST00000335551 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
CSMD1-201ENST00000335551 AVPP01185 164 aa4.18□□□□□ -1.74
CSMD1-201ENST00000335551 Q75L30 129 aa4.18□□□□□ -1.74
CSMD1-201ENST00000335551 C8orf17Q9NRJ1 99 aa4.17□□□□□ -1.74
CSMD1-201ENST00000335551 DMAC1Q96GE9 116 aa4.17□□□□□ -1.74
CSMD1-201ENST00000335551 KCNQ1DNQ9H478 68 aa4.17□□□□□ -1.74
CSMD1-201ENST00000335551 CSNK1G2-AS1Q8NCQ2 148 aa4.17□□□□□ -1.74
CSMD1-201ENST00000335551 ITPR2Q14571 2701 aa4.17□□□□□ -1.74
CSMD1-201ENST00000335551 FAM104AQ969W3 186 aa4.17□□□□□ -1.74
CSMD1-201ENST00000335551 EP400Q96L91 3159 aa4.16□□□□□ -1.74
CSMD1-201ENST00000335551 LINC00528Q8N1L1 170 aa4.15□□□□□ -1.75
CSMD1-201ENST00000335551 SETXQ7Z333 2677 aaKnown RBP4.15□□□□□ -1.75
CSMD1-201ENST00000335551 IGFL1Q6UW32 110 aa4.15□□□□□ -1.75
CSMD1-201ENST00000335551 CHTF8P0CG12 524 aa4.14□□□□□ -1.75
CSMD1-201ENST00000335551 PHF5AQ7RTV0 110 aaKnown RBP4.14□□□□□ -1.75
CSMD1-201ENST00000335551 ZNF292O60281 2723 aa4.14□□□□□ -1.75
CSMD1-201ENST00000335551 APCP25054 2843 aa4.13□□□□□ -1.75
CSMD1-201ENST00000335551 M0R2T5 61 aa4.13□□□□□ -1.75
CSMD1-201ENST00000335551 KMT2BQ9UMN6 2715 aaPredicted RBP4.13□□□□□ -1.75
CSMD1-201ENST00000335551 COL4A2P08572 1712 aa4.13□□□□□ -1.75
CSMD1-201ENST00000335551 RTL8CO15255 209 aa4.13□□□□□ -1.75
CSMD1-201ENST00000335551 A0A0D9SG42 100 aa4.12□□□□□ -1.75
CSMD1-201ENST00000335551 DNAH10OSP0CZ25 163 aa4.12□□□□□ -1.75
CSMD1-201ENST00000335551 OBSCN-AS1Q96MR7 158 aa4.12□□□□□ -1.75
CSMD1-201ENST00000335551 C15orf56Q8N910 161 aa4.11□□□□□ -1.75
CSMD1-201ENST00000335551 DSCR10P59022 87 aa4.11□□□□□ -1.75
CSMD1-201ENST00000335551 FAM168BA1KXE4 195 aa4.11□□□□□ -1.75
CSMD1-201ENST00000335551 IGLV1-50A0A075B6I6 118 aa4.11□□□□□ -1.75
CSMD1-201ENST00000335551 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
CSMD1-201ENST00000335551 CDSNQ15517 529 aa4.1□□□□□ -1.75
CSMD1-201ENST00000335551 NBDYA0A0U1RRE5 68 aa4.09□□□□□ -1.75
CSMD1-201ENST00000335551 SMR3AQ99954 134 aa4.09□□□□□ -1.75
CSMD1-201ENST00000335551 OCR1Q9BZK8 76 aa4.09□□□□□ -1.75
CSMD1-201ENST00000335551 IGSF10Q6WRI0 2623 aa4.09□□□□□ -1.76
CSMD1-201ENST00000335551 ITPR1Q14643 2758 aa4.09□□□□□ -1.76
CSMD1-201ENST00000335551 IGLV5-48A0A075B6I7 105 aa4.08□□□□□ -1.76
CSMD1-201ENST00000335551 A0A1B0GU33 70 aa4.08□□□□□ -1.76
CSMD1-201ENST00000335551 C10orf142B7Z368 130 aa4.08□□□□□ -1.76
CSMD1-201ENST00000335551 KRTAP10-9P60411 292 aa4.08□□□□□ -1.76
CSMD1-201ENST00000335551 PLA2G2DQ9UNK4 145 aa4.07□□□□□ -1.76
CSMD1-201ENST00000335551 Q8N377 158 aa4.07□□□□□ -1.76
CSMD1-201ENST00000335551 NBEAL2Q6ZNJ1 2754 aa4.06□□□□□ -1.76
CSMD1-201ENST00000335551 LINC00588Q9Y4M8 146 aa4.06□□□□□ -1.76
CSMD1-201ENST00000335551 Q5XG85 94 aa4.06□□□□□ -1.76
CSMD1-201ENST00000335551 IGLV7-46A0A075B6I9 117 aa4.05□□□□□ -1.76
CSMD1-201ENST00000335551 Q8NAQ8 132 aa4.05□□□□□ -1.76
CSMD1-201ENST00000335551 ZNF861PO60384 105 aa4.05□□□□□ -1.76
CSMD1-201ENST00000335551 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
CSMD1-201ENST00000335551 IGLV5-37A0A075B6J1 123 aa4.04□□□□□ -1.76
CSMD1-201ENST00000335551 Q8N1X5 172 aa4.04□□□□□ -1.76
CSMD1-201ENST00000335551 TLX1NBP0CAT3 122 aa4.04□□□□□ -1.76
CSMD1-201ENST00000335551 CSAG1Q6PB30 78 aa4.04□□□□□ -1.76
CSMD1-201ENST00000335551 ASB16-AS1Q495Z4 193 aa4.03□□□□□ -1.76
CSMD1-201ENST00000335551 LINC01558Q9Y6Z2 57 aa4.03□□□□□ -1.76
CSMD1-201ENST00000335551 PRR34Q9NV39 138 aa4.03□□□□□ -1.77
CSMD1-201ENST00000335551 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
CSMD1-201ENST00000335551 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
CSMD1-201ENST00000335551 C9orf163Q8N9P6 203 aa4.02□□□□□ -1.77
CSMD1-201ENST00000335551 UBR5O95071 2799 aaPredicted RBP4.02□□□□□ -1.77
CSMD1-201ENST00000335551 KLK9Q2XQG4 91 aa4.02□□□□□ -1.77
CSMD1-201ENST00000335551 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
CSMD1-201ENST00000335551 FP248Q71RG6 208 aaPredicted RBP4.01□□□□□ -1.77
CSMD1-201ENST00000335551 A0A1W2PPR1 153 aa4□□□□□ -1.77
CSMD1-201ENST00000335551 Q5VV11 94 aa4□□□□□ -1.77
CSMD1-201ENST00000335551 PRR26Q8N8Z3 221 aa4□□□□□ -1.77
CSMD1-201ENST00000335551 EIF4EBP3O60516 100 aaPredicted RBP4□□□□□ -1.77
CSMD1-201ENST00000335551 SPRR4Q96PI1 79 aa4□□□□□ -1.77
CSMD1-201ENST00000335551 SPINK7P58062 85 aa4□□□□□ -1.77
CSMD1-201ENST00000335551 FAM229BQ4G0N7 80 aa3.99□□□□□ -1.77
CSMD1-201ENST00000335551 ZNF575Q86XF7 245 aa3.99□□□□□ -1.77
CSMD1-201ENST00000335551 A0A1W2PNM2 257 aa3.99□□□□□ -1.77
CSMD1-201ENST00000335551 HRES1P13985 223 aa3.98□□□□□ -1.77
CSMD1-201ENST00000335551 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
CSMD1-201ENST00000335551 DNAH12Q6ZR08 3092 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms