RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 RPL37AP61513 92 aaKnown RBP12.77□□□□□ -0.37
NPLOC4-201ENST00000331134 LINC00336Q6ZUF6 198 aa12.77□□□□□ -0.37
NPLOC4-201ENST00000331134 COL6A5A8TX70 2615 aa12.77□□□□□ -0.37
NPLOC4-201ENST00000331134 ADGRG4Q8IZF6 3080 aa12.75□□□□□ -0.37
NPLOC4-201ENST00000331134 MUC3AQ02505 3323 aa12.75□□□□□ -0.37
NPLOC4-201ENST00000331134 NBEAL1Q6ZS30 2694 aa12.75□□□□□ -0.37
NPLOC4-201ENST00000331134 FSHBP01225 129 aa12.75□□□□□ -0.37
NPLOC4-201ENST00000331134 LOC400499M0QZD8 3231 aa12.74□□□□□ -0.37
NPLOC4-201ENST00000331134 LINC00476Q8WZB0 136 aa12.74□□□□□ -0.37
NPLOC4-201ENST00000331134 SPAG11AQ6PDA7 123 aa12.74□□□□□ -0.37
NPLOC4-201ENST00000331134 ASH1LQ9NR48 2969 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-201ENST00000331134 Q6ZRP5 223 aa12.73□□□□□ -0.37
NPLOC4-201ENST00000331134 IGLV6-57P01721 117 aa12.72□□□□□ -0.37
NPLOC4-201ENST00000331134 VPREB1P12018 145 aa12.72□□□□□ -0.37
NPLOC4-201ENST00000331134 Q6ZRX8 168 aa12.71□□□□□ -0.37
NPLOC4-201ENST00000331134 TACC2O95359 2948 aa12.7□□□□□ -0.38
NPLOC4-201ENST00000331134 K7ERS5 55 aa12.7□□□□□ -0.38
NPLOC4-201ENST00000331134 LY6G6CO95867 125 aa12.7□□□□□ -0.38
NPLOC4-201ENST00000331134 TRBV7-4A0A0J9YYF1 115 aa12.7□□□□□ -0.38
NPLOC4-201ENST00000331134 H7BZZ5 65 aa12.69□□□□□ -0.38
NPLOC4-201ENST00000331134 UBR5O95071 2799 aaPredicted RBP12.69□□□□□ -0.38
NPLOC4-201ENST00000331134 STAB1Q9NY15 2570 aa12.69□□□□□ -0.38
NPLOC4-201ENST00000331134 A0A0G2JQZ4 141 aa12.68□□□□□ -0.38
NPLOC4-201ENST00000331134 A0A1W2PNN7 141 aa12.68□□□□□ -0.38
NPLOC4-201ENST00000331134 K7EQZ3 153 aa12.68□□□□□ -0.38
NPLOC4-201ENST00000331134 A8MUN3 132 aa12.68□□□□□ -0.38
NPLOC4-201ENST00000331134 FAM168BA1KXE4 195 aa12.68□□□□□ -0.38
NPLOC4-201ENST00000331134 LIMD2Q9BT23 127 aa12.68□□□□□ -0.38
NPLOC4-201ENST00000331134 IL17DQ8TAD2 202 aa12.67□□□□□ -0.38
NPLOC4-201ENST00000331134 GIG44P09565 113 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-201ENST00000331134 Q8NAQ8 132 aa12.66□□□□□ -0.38
NPLOC4-201ENST00000331134 CSNK1G2-AS1Q8NCQ2 148 aa12.65□□□□□ -0.38
NPLOC4-201ENST00000331134 ASPMQ8IZT6 3477 aa12.65□□□□□ -0.39
NPLOC4-201ENST00000331134 F8WDY8 70 aa12.64□□□□□ -0.39
NPLOC4-201ENST00000331134 KLKP1Q107X0 134 aa12.64□□□□□ -0.39
NPLOC4-201ENST00000331134 SERTAD4-AS1Q5TG53 156 aa12.64□□□□□ -0.39
NPLOC4-201ENST00000331134 PHF5AQ7RTV0 110 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-201ENST00000331134 CR1P17927 2039 aa12.61□□□□□ -0.39
NPLOC4-201ENST00000331134 CHTF8P0CG12 524 aa12.61□□□□□ -0.39
NPLOC4-201ENST00000331134 LINC00528Q8N1L1 170 aa12.61□□□□□ -0.39
NPLOC4-201ENST00000331134 ATMQ13315 3056 aa12.6□□□□□ -0.39
NPLOC4-201ENST00000331134 IGKV2D-30A0A075B6S6 120 aa12.6□□□□□ -0.39
NPLOC4-201ENST00000331134 IGKV2-30P06310 120 aa12.6□□□□□ -0.39
NPLOC4-201ENST00000331134 MOBPQ13875 183 aa12.59□□□□□ -0.39
NPLOC4-201ENST00000331134 TRAV22A0A0B4J277 110 aa12.58□□□□□ -0.4
NPLOC4-201ENST00000331134 SETXQ7Z333 2677 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-201ENST00000331134 GVQW2A0A096LPI5 108 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-201ENST00000331134 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
NPLOC4-201ENST00000331134 EPM2AB3EWF7 344 aa12.55□□□□□ -0.4
NPLOC4-201ENST00000331134 ITPR1Q14643 2758 aa12.55□□□□□ -0.4
NPLOC4-201ENST00000331134 TNRC18O15417 2968 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-201ENST00000331134 IGLV5-52A0A0A0MRZ9 124 aa12.54□□□□□ -0.4
NPLOC4-201ENST00000331134 Q8N377 158 aa12.53□□□□□ -0.4
NPLOC4-201ENST00000331134 C19orf73Q9NVV2 129 aa12.53□□□□□ -0.4
NPLOC4-201ENST00000331134 ZFHX4Q86UP3 3567 aa12.52□□□□□ -0.41
NPLOC4-201ENST00000331134 LINC00588Q9Y4M8 146 aa12.51□□□□□ -0.41
NPLOC4-201ENST00000331134 IGLV8-61A0A075B6I0 122 aa12.51□□□□□ -0.41
NPLOC4-201ENST00000331134 A0A1B0GW54 56 aa12.5□□□□□ -0.41
NPLOC4-201ENST00000331134 CYSTM1Q9H1C7 97 aa12.5□□□□□ -0.41
NPLOC4-201ENST00000331134 ZZEF1O43149 2961 aa12.5□□□□□ -0.41
NPLOC4-201ENST00000331134 A0A1B0GU69 56 aa12.48□□□□□ -0.41
NPLOC4-201ENST00000331134 COL12A1Q99715 3063 aa12.47□□□□□ -0.41
NPLOC4-201ENST00000331134 ERC2-IT1O76042 136 aa12.46□□□□□ -0.41
NPLOC4-201ENST00000331134 KCNQ1DNQ9H478 68 aa12.46□□□□□ -0.41
NPLOC4-201ENST00000331134 PRR34Q9NV39 138 aa12.46□□□□□ -0.41
NPLOC4-201ENST00000331134 DCHS1Q96JQ0 3298 aa12.45□□□□□ -0.42
NPLOC4-201ENST00000331134 C15orf56Q8N910 161 aa12.45□□□□□ -0.42
NPLOC4-201ENST00000331134 H3BNG1 76 aa12.44□□□□□ -0.42
NPLOC4-201ENST00000331134 OBSCN-AS1Q96MR7 158 aa12.44□□□□□ -0.42
NPLOC4-201ENST00000331134 TP53AIP1Q9HCN2 124 aa12.44□□□□□ -0.42
NPLOC4-201ENST00000331134 FLNCQ14315 2725 aa12.44□□□□□ -0.42
NPLOC4-201ENST00000331134 NUPR2A6NF83 97 aa12.43□□□□□ -0.42
NPLOC4-201ENST00000331134 IGFL1Q6UW32 110 aa12.43□□□□□ -0.42
NPLOC4-201ENST00000331134 A0A096LNT2 108 aa12.43□□□□□ -0.42
NPLOC4-201ENST00000331134 IGLV1-50A0A075B6I6 118 aa12.43□□□□□ -0.42
NPLOC4-201ENST00000331134 SPACA4Q8TDM5 124 aa12.43□□□□□ -0.42
NPLOC4-201ENST00000331134 COA5Q86WW8 74 aa12.41□□□□□ -0.42
NPLOC4-201ENST00000331134 LINC01600Q96MT4 127 aa12.41□□□□□ -0.42
NPLOC4-201ENST00000331134 NSD1Q96L73 2696 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-201ENST00000331134 A0A1W2PNM2 257 aa12.4□□□□□ -0.42
NPLOC4-201ENST00000331134 ATP11AUNQ6ZP68 121 aa12.4□□□□□ -0.42
NPLOC4-201ENST00000331134 LRBAP50851 2863 aa12.4□□□□□ -0.43
NPLOC4-201ENST00000331134 BAHCC1Q9P281 2608 aa12.39□□□□□ -0.43
NPLOC4-201ENST00000331134 DMXL1Q9Y485 3027 aa12.39□□□□□ -0.43
NPLOC4-201ENST00000331134 C16orf90A8MZG2 172 aa12.39□□□□□ -0.43
NPLOC4-201ENST00000331134 ACYP2P14621 99 aa12.38□□□□□ -0.43
NPLOC4-201ENST00000331134 LAMA5O15230 3695 aa12.38□□□□□ -0.43
NPLOC4-201ENST00000331134 H3BPC8 53 aa12.38□□□□□ -0.43
NPLOC4-201ENST00000331134 MDFIQ99750 246 aa12.38□□□□□ -0.43
NPLOC4-201ENST00000331134 A8MWP4 228 aa12.37□□□□□ -0.43
NPLOC4-201ENST00000331134 C7orf65Q6ZTY9 151 aa12.36□□□□□ -0.43
NPLOC4-201ENST00000331134 DNAH10OSP0CZ25 163 aa12.35□□□□□ -0.43
NPLOC4-201ENST00000331134 C1orf134Q5TEV5 83 aa12.34□□□□□ -0.43
NPLOC4-201ENST00000331134 LINC00612Q8N6U2 182 aa12.33□□□□□ -0.44
NPLOC4-201ENST00000331134 CASC10Q5T4H9 136 aa12.32□□□□□ -0.44
NPLOC4-201ENST00000331134 PRR15Q8IV56 129 aa12.32□□□□□ -0.44
NPLOC4-201ENST00000331134 KRTAP24-1Q3LI83 254 aa12.32□□□□□ -0.44
NPLOC4-201ENST00000331134 KRTAP10-3P60369 221 aa12.3□□□□□ -0.44
NPLOC4-201ENST00000331134 STAB2Q8WWQ8 2551 aa12.3□□□□□ -0.44
NPLOC4-201ENST00000331134 Q8NDZ9 215 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 267.7 ms