RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SPINK6Q6UWN8 80 aa10.65□□□□□ -0.7
SYNM-201ENST00000328642 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
SYNM-201ENST00000328642 SNURFQ9Y675 71 aa10.65□□□□□ -0.7
SYNM-201ENST00000328642 LINC01561Q8N1V8 128 aa10.65□□□□□ -0.7
SYNM-201ENST00000328642 WFDC13Q8IUB5 93 aa10.64□□□□□ -0.71
SYNM-201ENST00000328642 C15orf56Q8N910 161 aa10.64□□□□□ -0.71
SYNM-201ENST00000328642 ST20-AS1Q8NBB2 130 aa10.64□□□□□ -0.71
SYNM-201ENST00000328642 PDE6GP18545 87 aa10.64□□□□□ -0.71
SYNM-201ENST00000328642 REG3GQ6UW15 175 aa10.63□□□□□ -0.71
SYNM-201ENST00000328642 C1orf137Q5JT78 98 aa10.63□□□□□ -0.71
SYNM-201ENST00000328642 NUPR2A6NF83 97 aa10.62□□□□□ -0.71
SYNM-201ENST00000328642 FAM19A3Q7Z5A8 133 aa10.62□□□□□ -0.71
SYNM-201ENST00000328642 H3BNG1 76 aa10.62□□□□□ -0.71
SYNM-201ENST00000328642 TENM2Q9NT68 2774 aa10.61□□□□□ -0.71
SYNM-201ENST00000328642 FAM240AA0A1B0GVK7 77 aa10.61□□□□□ -0.71
SYNM-201ENST00000328642 A0A0G2JQZ4 141 aa10.61□□□□□ -0.71
SYNM-201ENST00000328642 A0A1W2PNN7 141 aa10.61□□□□□ -0.71
SYNM-201ENST00000328642 DHRS4-AS1Q9P1J3 65 aa10.61□□□□□ -0.71
SYNM-201ENST00000328642 PHF5AQ7RTV0 110 aaKnown RBP10.61□□□□□ -0.71
SYNM-201ENST00000328642 MUC7Q8TAX7 377 aa10.61□□□□□ -0.71
SYNM-201ENST00000328642 VPREB1P12018 145 aa10.6□□□□□ -0.71
SYNM-201ENST00000328642 PRR4Q16378 134 aa10.58□□□□□ -0.71
SYNM-201ENST00000328642 SMCR5Q8TEV8 140 aa10.58□□□□□ -0.72
SYNM-201ENST00000328642 Q6ZVQ6 151 aa10.57□□□□□ -0.72
SYNM-201ENST00000328642 Q8NDZ9 215 aa10.57□□□□□ -0.72
SYNM-201ENST00000328642 TRRAPQ9Y4A5 3859 aa10.56□□□□□ -0.72
SYNM-201ENST00000328642 A0A087WSZ3 146 aa10.56□□□□□ -0.72
SYNM-201ENST00000328642 H3BQ85 93 aa10.55□□□□□ -0.72
SYNM-201ENST00000328642 J3KT08 172 aa10.55□□□□□ -0.72
SYNM-201ENST00000328642 UQCRQO14949 82 aa10.54□□□□□ -0.72
SYNM-201ENST00000328642 Q6JHZ5 121 aa10.54□□□□□ -0.72
SYNM-201ENST00000328642 IGLV5-52A0A0A0MRZ9 124 aa10.53□□□□□ -0.72
SYNM-201ENST00000328642 GVQW2A0A096LPI5 108 aaPredicted RBP10.52□□□□□ -0.72
SYNM-201ENST00000328642 IGLV6-57P01721 117 aa10.52□□□□□ -0.73
SYNM-201ENST00000328642 TM2D3Q9BRN9 247 aa10.52□□□□□ -0.73
SYNM-201ENST00000328642 FAM30AQ9NZY2 134 aa10.52□□□□□ -0.73
SYNM-201ENST00000328642 Q9BRP9 147 aa10.51□□□□□ -0.73
SYNM-201ENST00000328642 NDUFB1O75438 58 aa10.51□□□□□ -0.73
SYNM-201ENST00000328642 ELOF1P60002 83 aaKnown RBP10.51□□□□□ -0.73
SYNM-201ENST00000328642 SVIPQ8NHG7 77 aa10.51□□□□□ -0.73
SYNM-201ENST00000328642 NBDYA0A0U1RRE5 68 aa10.5□□□□□ -0.73
SYNM-201ENST00000328642 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
SYNM-201ENST00000328642 LINC01547P58512 204 aaPredicted RBP10.5□□□□□ -0.73
SYNM-201ENST00000328642 SERP2Q8N6R1 65 aa10.5□□□□□ -0.73
SYNM-201ENST00000328642 ZNF469Q96JG9 3925 aaPredicted RBP10.49□□□□□ -0.73
SYNM-201ENST00000328642 C1orf134Q5TEV5 83 aa10.49□□□□□ -0.73
SYNM-201ENST00000328642 COX7CP15954 63 aa10.48□□□□□ -0.73
SYNM-201ENST00000328642 PKIGQ9Y2B9 76 aa10.46□□□□□ -0.73
SYNM-201ENST00000328642 NHLRC4P0CG21 123 aaPredicted RBP10.46□□□□□ -0.73
SYNM-201ENST00000328642 PRYO14603 147 aa10.46□□□□□ -0.74
SYNM-201ENST00000328642 ATP5EP2Q5VTU8 51 aa10.46□□□□□ -0.74
SYNM-201ENST00000328642 Q6Q795 121 aa10.45□□□□□ -0.74
SYNM-201ENST00000328642 CIRBP-AS1Q8TBR5 109 aa10.45□□□□□ -0.74
SYNM-201ENST00000328642 Q6ZQT0 140 aa10.44□□□□□ -0.74
SYNM-201ENST00000328642 Q6ZRX8 168 aa10.44□□□□□ -0.74
SYNM-201ENST00000328642 TGP01266 2768 aa10.44□□□□□ -0.74
SYNM-201ENST00000328642 ERC2-IT1O76042 136 aa10.42□□□□□ -0.74
SYNM-201ENST00000328642 LINC00528Q8N1L1 170 aa10.41□□□□□ -0.74
SYNM-201ENST00000328642 LINC00474Q9P2X8 69 aa10.41□□□□□ -0.74
SYNM-201ENST00000328642 TRBV7-7A0A0K0K1E9 115 aa10.41□□□□□ -0.74
SYNM-201ENST00000328642 EPM2AB3EWF7 344 aa10.41□□□□□ -0.74
SYNM-201ENST00000328642 WIPF1O43516 503 aa10.41□□□□□ -0.74
SYNM-201ENST00000328642 MP68P56378 58 aa10.4□□□□□ -0.74
SYNM-201ENST00000328642 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
SYNM-201ENST00000328642 ANAPC11Q9NYG5 84 aa10.39□□□□□ -0.75
SYNM-201ENST00000328642 A0A0U1RQV1 116 aa10.39□□□□□ -0.75
SYNM-201ENST00000328642 IGKV4-1P06312 121 aa10.39□□□□□ -0.75
SYNM-201ENST00000328642 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
SYNM-201ENST00000328642 LINC00476Q8WZB0 136 aa10.37□□□□□ -0.75
SYNM-201ENST00000328642 IGLV1-50A0A075B6I6 118 aa10.37□□□□□ -0.75
SYNM-201ENST00000328642 RPL37AP61513 92 aaKnown RBP10.36□□□□□ -0.75
SYNM-201ENST00000328642 RTL8CO15255 209 aa10.36□□□□□ -0.75
SYNM-201ENST00000328642 KRTAP1-5Q9BYS1 174 aa10.36□□□□□ -0.75
SYNM-201ENST00000328642 C5orf47Q569G3 176 aa10.35□□□□□ -0.75
SYNM-201ENST00000328642 Q8N377 158 aa10.35□□□□□ -0.75
SYNM-201ENST00000328642 MPLKIPQ8TAP9 179 aa10.35□□□□□ -0.75
SYNM-201ENST00000328642 APLNQ9ULZ1 77 aa10.35□□□□□ -0.75
SYNM-201ENST00000328642 F8WDY8 70 aa10.34□□□□□ -0.75
SYNM-201ENST00000328642 BRK1Q8WUW1 75 aa10.33□□□□□ -0.76
SYNM-201ENST00000328642 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
SYNM-201ENST00000328642 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.76
SYNM-201ENST00000328642 IGHV6-1A0A0B4J1U7 121 aa10.33□□□□□ -0.76
SYNM-201ENST00000328642 MOBPQ13875 183 aa10.32□□□□□ -0.76
SYNM-201ENST00000328642 FAM236DA0A1B0GTK5 79 aa10.31□□□□□ -0.76
SYNM-201ENST00000328642 FAM236CP0DP71 79 aa10.31□□□□□ -0.76
SYNM-201ENST00000328642 SMIM29Q86T20 159 aa10.3□□□□□ -0.76
SYNM-201ENST00000328642 LINC00208Q96KT6 92 aa10.3□□□□□ -0.76
SYNM-201ENST00000328642 TRAV7A0A075B6U4 112 aa10.27□□□□□ -0.76
SYNM-201ENST00000328642 Q8NBF4 154 aa10.27□□□□□ -0.77
SYNM-201ENST00000328642 TRBV7-6A0A0J9YX20 115 aa10.25□□□□□ -0.77
SYNM-201ENST00000328642 C9orf163Q8N9P6 203 aa10.25□□□□□ -0.77
SYNM-201ENST00000328642 LOC110117498A0A087WWA1 95 aa10.24□□□□□ -0.77
SYNM-201ENST00000328642 C4orf26Q17RF5 130 aa10.24□□□□□ -0.77
SYNM-201ENST00000328642 A0A087WTM6 91 aa10.24□□□□□ -0.77
SYNM-201ENST00000328642 KRTAP26-1Q6PEX3 210 aa10.23□□□□□ -0.77
SYNM-201ENST00000328642 TMEM258P61165 79 aa10.23□□□□□ -0.77
SYNM-201ENST00000328642 PCOTHQ58A44 107 aa10.22□□□□□ -0.77
SYNM-201ENST00000328642 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
SYNM-201ENST00000328642 CASC2Q6XLA1 102 aa10.22□□□□□ -0.77
SYNM-201ENST00000328642 TMEM254Q8TBM7 123 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms