RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 TRBV7-4A0A0J9YYF1 115 aa10.56□□□□□ -0.72
USHBP1-202ENST00000324554 J3KT08 172 aa10.56□□□□□ -0.72
USHBP1-202ENST00000324554 TMEM258P61165 79 aa10.56□□□□□ -0.72
USHBP1-202ENST00000324554 PDE6GP18545 87 aa10.55□□□□□ -0.72
USHBP1-202ENST00000324554 HUWE1Q7Z6Z7 4374 aaKnown RBP10.54□□□□□ -0.72
USHBP1-202ENST00000324554 SYCNQ0VAF6 134 aa10.53□□□□□ -0.72
USHBP1-202ENST00000324554 F8WDY8 70 aa10.52□□□□□ -0.73
USHBP1-202ENST00000324554 DNAH10OSP0CZ25 163 aa10.52□□□□□ -0.73
USHBP1-202ENST00000324554 LINC00528Q8N1L1 170 aa10.52□□□□□ -0.73
USHBP1-202ENST00000324554 DPH3Q96FX2 82 aa10.52□□□□□ -0.73
USHBP1-202ENST00000324554 RPS28P62857 69 aaKnown RBP10.51□□□□□ -0.73
USHBP1-202ENST00000324554 STAB2Q8WWQ8 2551 aa10.51□□□□□ -0.73
USHBP1-202ENST00000324554 TRAV10A0A0B4J240 114 aa10.5□□□□□ -0.73
USHBP1-202ENST00000324554 C20orf197Q8N268 126 aa10.5□□□□□ -0.73
USHBP1-202ENST00000324554 CXCL6P80162 114 aa10.49□□□□□ -0.73
USHBP1-202ENST00000324554 FAM19A5Q7Z5A7 132 aaPredicted RBP10.49□□□□□ -0.73
USHBP1-202ENST00000324554 SCXQ7RTU7 201 aa10.49□□□□□ -0.73
USHBP1-202ENST00000324554 DNAH1Q9P2D7 4330 aa10.47□□□□□ -0.73
USHBP1-202ENST00000324554 OXTP01178 125 aa10.47□□□□□ -0.73
USHBP1-202ENST00000324554 SERTAD4-AS1Q5TG53 156 aa10.46□□□□□ -0.73
USHBP1-202ENST00000324554 LINC00588Q9Y4M8 146 aa10.46□□□□□ -0.74
USHBP1-202ENST00000324554 TRAV7A0A075B6U4 112 aa10.45□□□□□ -0.74
USHBP1-202ENST00000324554 NKAPP1Q8N9T2 125 aa10.45□□□□□ -0.74
USHBP1-202ENST00000324554 BCE1O60756 84 aa10.44□□□□□ -0.74
USHBP1-202ENST00000324554 KCNQ1DNQ9H478 68 aa10.44□□□□□ -0.74
USHBP1-202ENST00000324554 C7orf33Q8WU49 177 aa10.44□□□□□ -0.74
USHBP1-202ENST00000324554 TLX1NBP0CAT3 122 aa10.43□□□□□ -0.74
USHBP1-202ENST00000324554 CASC10Q5T4H9 136 aa10.43□□□□□ -0.74
USHBP1-202ENST00000324554 DNHD1Q96M86 4753 aa10.43□□□□□ -0.74
USHBP1-202ENST00000324554 LYSTQ99698 3801 aa10.42□□□□□ -0.74
USHBP1-202ENST00000324554 H7BZZ5 65 aa10.39□□□□□ -0.75
USHBP1-202ENST00000324554 PLA2G2DQ9UNK4 145 aa10.39□□□□□ -0.75
USHBP1-202ENST00000324554 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
USHBP1-202ENST00000324554 DNAH9Q9NYC9 4486 aa10.39□□□□□ -0.75
USHBP1-202ENST00000324554 Q8N9L7 120 aa10.38□□□□□ -0.75
USHBP1-202ENST00000324554 TENM2Q9NT68 2774 aa10.38□□□□□ -0.75
USHBP1-202ENST00000324554 FAM168BA1KXE4 195 aa10.38□□□□□ -0.75
USHBP1-202ENST00000324554 Q8N377 158 aa10.38□□□□□ -0.75
USHBP1-202ENST00000324554 SNURFQ9Y675 71 aa10.38□□□□□ -0.75
USHBP1-202ENST00000324554 MEGF8Q7Z7M0 2845 aa10.38□□□□□ -0.75
USHBP1-202ENST00000324554 B9D2Q9BPU9 175 aa10.37□□□□□ -0.75
USHBP1-202ENST00000324554 KLKP1Q107X0 134 aa10.37□□□□□ -0.75
USHBP1-202ENST00000324554 RPL37AP8A6NKH3 93 aa10.36□□□□□ -0.75
USHBP1-202ENST00000324554 RMI2Q96E14 147 aa10.36□□□□□ -0.75
USHBP1-202ENST00000324554 IGLV5-37A0A075B6J1 123 aa10.35□□□□□ -0.75
USHBP1-202ENST00000324554 FAM236DA0A1B0GTK5 79 aa10.35□□□□□ -0.75
USHBP1-202ENST00000324554 C3orf84H3BNL1 204 aa10.35□□□□□ -0.75
USHBP1-202ENST00000324554 FAM236CP0DP71 79 aa10.35□□□□□ -0.75
USHBP1-202ENST00000324554 KRTAP7-1Q8IUC3 87 aa10.35□□□□□ -0.75
USHBP1-202ENST00000324554 CSMD3Q7Z407 3707 aa10.34□□□□□ -0.75
USHBP1-202ENST00000324554 IGLV1-50A0A075B6I6 118 aa10.34□□□□□ -0.75
USHBP1-202ENST00000324554 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
USHBP1-202ENST00000324554 Q6ZRX8 168 aa10.34□□□□□ -0.75
USHBP1-202ENST00000324554 IGKV4-1P06312 121 aa10.33□□□□□ -0.76
USHBP1-202ENST00000324554 Q9BRP9 147 aa10.33□□□□□ -0.76
USHBP1-202ENST00000324554 PRYO14603 147 aa10.33□□□□□ -0.76
USHBP1-202ENST00000324554 NREPQ16612 68 aa10.33□□□□□ -0.76
USHBP1-202ENST00000324554 PRKDCP78527 4128 aaKnown RBP10.33□□□□□ -0.76
USHBP1-202ENST00000324554 IGLV5-48A0A075B6I7 105 aa10.32□□□□□ -0.76
USHBP1-202ENST00000324554 SPRR1AP35321 89 aa10.32□□□□□ -0.76
USHBP1-202ENST00000324554 DHRS4-AS1Q9P1J3 65 aa10.32□□□□□ -0.76
USHBP1-202ENST00000324554 BPY2O14599 106 aa10.32□□□□□ -0.76
USHBP1-202ENST00000324554 Q5XG85 94 aa10.29□□□□□ -0.76
USHBP1-202ENST00000324554 ETDCA0A1B0GVM5 59 aa10.29□□□□□ -0.76
USHBP1-202ENST00000324554 F8WEM9 126 aa10.29□□□□□ -0.76
USHBP1-202ENST00000324554 ST20-AS1Q8NBB2 130 aa10.29□□□□□ -0.76
USHBP1-202ENST00000324554 MRPL55Q7Z7F7 128 aaKnown RBP10.28□□□□□ -0.76
USHBP1-202ENST00000324554 A0A1W2PNM2 257 aa10.27□□□□□ -0.77
USHBP1-202ENST00000324554 C4orf26Q17RF5 130 aa10.27□□□□□ -0.77
USHBP1-202ENST00000324554 DNAH10Q8IVF4 4471 aa10.26□□□□□ -0.77
USHBP1-202ENST00000324554 DNAH7Q8WXX0 4024 aa10.26□□□□□ -0.77
USHBP1-202ENST00000324554 TNP2Q05952 138 aa10.26□□□□□ -0.77
USHBP1-202ENST00000324554 EPM2AB3EWF7 344 aa10.25□□□□□ -0.77
USHBP1-202ENST00000324554 ERC2-IT1O76042 136 aa10.25□□□□□ -0.77
USHBP1-202ENST00000324554 TMEM254Q8TBM7 123 aa10.24□□□□□ -0.77
USHBP1-202ENST00000324554 OCR1Q9BZK8 76 aa10.24□□□□□ -0.77
USHBP1-202ENST00000324554 SERP1Q9Y6X1 66 aa10.24□□□□□ -0.77
USHBP1-202ENST00000324554 C5orf47Q569G3 176 aa10.23□□□□□ -0.77
USHBP1-202ENST00000324554 C1orf137Q5JT78 98 aa10.23□□□□□ -0.77
USHBP1-202ENST00000324554 KRTAP1-5Q9BYS1 174 aa10.23□□□□□ -0.77
USHBP1-202ENST00000324554 APLNQ9ULZ1 77 aa10.23□□□□□ -0.77
USHBP1-202ENST00000324554 FUSP35637 526 aaKnown RBP eCLIP10.23□□□□□ -0.77
USHBP1-202ENST00000324554 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
USHBP1-202ENST00000324554 REG3GQ6UW15 175 aa10.21□□□□□ -0.78
USHBP1-202ENST00000324554 UBE2BP63146 152 aa10.2□□□□□ -0.78
USHBP1-202ENST00000324554 NDUFC1O43677 76 aa10.19□□□□□ -0.78
USHBP1-202ENST00000324554 HRCT1Q6UXD1 115 aa10.19□□□□□ -0.78
USHBP1-202ENST00000324554 Q8NBF4 154 aa10.19□□□□□ -0.78
USHBP1-202ENST00000324554 A0A1B0GW54 56 aa10.18□□□□□ -0.78
USHBP1-202ENST00000324554 TGP01266 2768 aa10.18□□□□□ -0.78
USHBP1-202ENST00000324554 A0A096LNI7 61 aa10.17□□□□□ -0.78
USHBP1-202ENST00000324554 CNBPP62633 177 aaKnown RBP10.16□□□□□ -0.78
USHBP1-202ENST00000324554 SPRR4Q96PI1 79 aa10.16□□□□□ -0.78
USHBP1-202ENST00000324554 A0A0U1RQV1 116 aa10.16□□□□□ -0.78
USHBP1-202ENST00000324554 C16orf90A8MZG2 172 aa10.16□□□□□ -0.78
USHBP1-202ENST00000324554 SMIM29Q86T20 159 aa10.16□□□□□ -0.78
USHBP1-202ENST00000324554 IGKV2-24A0A0C4DH68 120 aa10.15□□□□□ -0.78
USHBP1-202ENST00000324554 FBN3Q75N90 2809 aa10.15□□□□□ -0.78
USHBP1-202ENST00000324554 PLECQ15149 4684 aaKnown RBP10.14□□□□□ -0.79
USHBP1-202ENST00000324554 PSCAO43653 123 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms