RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 NDUFC2-KCTD14E9PQ53 114 aa13.04□□□□□ -0.32
CRLF3-201ENST00000324238 C1orf43Q9BWL3 253 aa13.04□□□□□ -0.32
CRLF3-201ENST00000324238 RPS28P62857 69 aaKnown RBP13.04□□□□□ -0.32
CRLF3-201ENST00000324238 EGFEM1PQ0D2K5 195 aa13.04□□□□□ -0.32
CRLF3-201ENST00000324238 SERTAD4-AS1Q5TG53 156 aa13.04□□□□□ -0.32
CRLF3-201ENST00000324238 LINC00528Q8N1L1 170 aa13.03□□□□□ -0.32
CRLF3-201ENST00000324238 DEFB131BA0A096LNP1 70 aa13.02□□□□□ -0.32
CRLF3-201ENST00000324238 TRAV7A0A075B6U4 112 aa13.02□□□□□ -0.33
CRLF3-201ENST00000324238 BPY2O14599 106 aa13.02□□□□□ -0.33
CRLF3-201ENST00000324238 TENM2Q9NT68 2774 aa13.01□□□□□ -0.33
CRLF3-201ENST00000324238 FAM168BA1KXE4 195 aa13.01□□□□□ -0.33
CRLF3-201ENST00000324238 H7BZZ5 65 aa13.01□□□□□ -0.33
CRLF3-201ENST00000324238 KRTAP24-1Q3LI83 254 aa13□□□□□ -0.33
CRLF3-201ENST00000324238 HRCT1Q6UXD1 115 aa13□□□□□ -0.33
CRLF3-201ENST00000324238 CASC10Q5T4H9 136 aa12.99□□□□□ -0.33
CRLF3-201ENST00000324238 FAM236DA0A1B0GTK5 79 aa12.98□□□□□ -0.33
CRLF3-201ENST00000324238 FAM236CP0DP71 79 aa12.98□□□□□ -0.33
CRLF3-201ENST00000324238 PDE6GP18545 87 aa12.98□□□□□ -0.33
CRLF3-201ENST00000324238 SYCNQ0VAF6 134 aa12.98□□□□□ -0.33
CRLF3-201ENST00000324238 C11orf45Q8TAV5 145 aa12.98□□□□□ -0.33
CRLF3-201ENST00000324238 F8WEM9 126 aa12.97□□□□□ -0.33
CRLF3-201ENST00000324238 STAB2Q8WWQ8 2551 aa12.97□□□□□ -0.33
CRLF3-201ENST00000324238 CXCL6P80162 114 aa12.97□□□□□ -0.33
CRLF3-201ENST00000324238 NKAPP1Q8N9T2 125 aa12.97□□□□□ -0.33
CRLF3-201ENST00000324238 C7orf33Q8WU49 177 aa12.96□□□□□ -0.33
CRLF3-201ENST00000324238 SRRM2Q9UQ35 2752 aaKnown RBP12.94□□□□□ -0.34
CRLF3-201ENST00000324238 Q5XG85 94 aa12.94□□□□□ -0.34
CRLF3-201ENST00000324238 NREPQ16612 68 aa12.93□□□□□ -0.34
CRLF3-201ENST00000324238 ST20-AS1Q8NBB2 130 aa12.93□□□□□ -0.34
CRLF3-201ENST00000324238 TRBV7-6A0A0J9YX20 115 aa12.92□□□□□ -0.34
CRLF3-201ENST00000324238 Q8N377 158 aa12.92□□□□□ -0.34
CRLF3-201ENST00000324238 A0A0G2JQZ4 141 aa12.91□□□□□ -0.34
CRLF3-201ENST00000324238 A0A1W2PNN7 141 aa12.91□□□□□ -0.34
CRLF3-201ENST00000324238 LYSTQ99698 3801 aa12.9□□□□□ -0.35
CRLF3-201ENST00000324238 CMYA5Q8N3K9 4069 aa12.89□□□□□ -0.35
CRLF3-201ENST00000324238 WIPF1O43516 503 aa12.89□□□□□ -0.35
CRLF3-201ENST00000324238 C5orf47Q569G3 176 aa12.88□□□□□ -0.35
CRLF3-201ENST00000324238 IGKV4-1P06312 121 aa12.87□□□□□ -0.35
CRLF3-201ENST00000324238 KLKP1Q107X0 134 aa12.87□□□□□ -0.35
CRLF3-201ENST00000324238 H3BQ85 93 aa12.86□□□□□ -0.35
CRLF3-201ENST00000324238 Q9BRP9 147 aa12.86□□□□□ -0.35
CRLF3-201ENST00000324238 LINC01556Q5JQF7 62 aa12.85□□□□□ -0.35
CRLF3-201ENST00000324238 ERC2-IT1O76042 136 aa12.84□□□□□ -0.35
CRLF3-201ENST00000324238 KCNQ1DNQ9H478 68 aa12.84□□□□□ -0.35
CRLF3-201ENST00000324238 TMEM254Q8TBM7 123 aa12.82□□□□□ -0.36
CRLF3-201ENST00000324238 H3BNG1 76 aa12.82□□□□□ -0.36
CRLF3-201ENST00000324238 KRTAP7-1Q8IUC3 87 aa12.82□□□□□ -0.36
CRLF3-201ENST00000324238 LINC00474Q9P2X8 69 aa12.81□□□□□ -0.36
CRLF3-201ENST00000324238 LINC00588Q9Y4M8 146 aa12.81□□□□□ -0.36
CRLF3-201ENST00000324238 A0A1W2PNM2 257 aa12.81□□□□□ -0.36
CRLF3-201ENST00000324238 FAM30AQ9NZY2 134 aa12.8□□□□□ -0.36
CRLF3-201ENST00000324238 COL7A1Q02388 2944 aa12.8□□□□□ -0.36
CRLF3-201ENST00000324238 ETDCA0A1B0GVM5 59 aa12.8□□□□□ -0.36
CRLF3-201ENST00000324238 HIGD2AQ9BW72 106 aa12.78□□□□□ -0.36
CRLF3-201ENST00000324238 BCE1O60756 84 aa12.78□□□□□ -0.36
CRLF3-201ENST00000324238 Q6ZRX8 168 aa12.78□□□□□ -0.36
CRLF3-201ENST00000324238 SERP1Q9Y6X1 66 aa12.78□□□□□ -0.36
CRLF3-201ENST00000324238 DNAH10Q8IVF4 4471 aa12.77□□□□□ -0.37
CRLF3-201ENST00000324238 UBE2BP63146 152 aa12.77□□□□□ -0.37
CRLF3-201ENST00000324238 DEFB116Q30KQ4 102 aa12.77□□□□□ -0.37
CRLF3-201ENST00000324238 C1orf137Q5JT78 98 aa12.76□□□□□ -0.37
CRLF3-201ENST00000324238 SMIM29Q86T20 159 aa12.76□□□□□ -0.37
CRLF3-201ENST00000324238 IGLV1-50A0A075B6I6 118 aa12.74□□□□□ -0.37
CRLF3-201ENST00000324238 OCR1Q9BZK8 76 aa12.73□□□□□ -0.37
CRLF3-201ENST00000324238 FUSP35637 526 aaKnown RBP eCLIP12.73□□□□□ -0.37
CRLF3-201ENST00000324238 FP248Q71RG6 208 aaPredicted RBP12.73□□□□□ -0.37
CRLF3-201ENST00000324238 IGLV5-48A0A075B6I7 105 aa12.72□□□□□ -0.37
CRLF3-201ENST00000324238 IGKV2-24A0A0C4DH68 120 aa12.72□□□□□ -0.37
CRLF3-201ENST00000324238 DNAH10OSP0CZ25 163 aa12.72□□□□□ -0.37
CRLF3-201ENST00000324238 KRTAP4-16G5E9R7 235 aaPredicted RBP12.72□□□□□ -0.37
CRLF3-201ENST00000324238 FAM229BQ4G0N7 80 aa12.7□□□□□ -0.38
CRLF3-201ENST00000324238 EPM2AB3EWF7 344 aa12.69□□□□□ -0.38
CRLF3-201ENST00000324238 MRPL55Q7Z7F7 128 aaKnown RBP12.69□□□□□ -0.38
CRLF3-201ENST00000324238 DHRS4-AS1Q9P1J3 65 aa12.69□□□□□ -0.38
CRLF3-201ENST00000324238 MPLKIPQ8TAP9 179 aa12.68□□□□□ -0.38
CRLF3-201ENST00000324238 PRLHP81277 87 aa12.67□□□□□ -0.38
CRLF3-201ENST00000324238 HUWE1Q7Z6Z7 4374 aaKnown RBP12.67□□□□□ -0.38
CRLF3-201ENST00000324238 LINC00336Q6ZUF6 198 aa12.66□□□□□ -0.38
CRLF3-201ENST00000324238 LRCOL1A6NCL2 159 aa12.66□□□□□ -0.38
CRLF3-201ENST00000324238 K7EQZ3 153 aa12.66□□□□□ -0.38
CRLF3-201ENST00000324238 PRYO14603 147 aa12.66□□□□□ -0.38
CRLF3-201ENST00000324238 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.65□□□□□ -0.38
CRLF3-201ENST00000324238 K7EIL1 84 aa12.65□□□□□ -0.38
CRLF3-201ENST00000324238 A0A0U1RQV1 116 aa12.64□□□□□ -0.39
CRLF3-201ENST00000324238 Q8NBF4 154 aa12.64□□□□□ -0.39
CRLF3-201ENST00000324238 DSCR10P59022 87 aa12.63□□□□□ -0.39
CRLF3-201ENST00000324238 TNP2Q05952 138 aa12.63□□□□□ -0.39
CRLF3-201ENST00000324238 TLX1NBP0CAT3 122 aa12.62□□□□□ -0.39
CRLF3-201ENST00000324238 SPRR1AP35321 89 aa12.62□□□□□ -0.39
CRLF3-201ENST00000324238 PRR4Q16378 134 aa12.62□□□□□ -0.39
CRLF3-201ENST00000324238 NDUFC1O43677 76 aa12.6□□□□□ -0.39
CRLF3-201ENST00000324238 LINC00476Q8WZB0 136 aa12.6□□□□□ -0.39
CRLF3-201ENST00000324238 DNAH3Q8TD57 4116 aa12.6□□□□□ -0.39
CRLF3-201ENST00000324238 SMIM26A0A096LP01 95 aa12.6□□□□□ -0.39
CRLF3-201ENST00000324238 KRTAP1-5Q9BYS1 174 aa12.6□□□□□ -0.39
CRLF3-201ENST00000324238 REG3GQ6UW15 175 aa12.59□□□□□ -0.39
CRLF3-201ENST00000324238 DNAH1Q9P2D7 4330 aa12.58□□□□□ -0.4
CRLF3-201ENST00000324238 A0A096LNI7 61 aa12.58□□□□□ -0.4
CRLF3-201ENST00000324238 F8WDY8 70 aa12.57□□□□□ -0.4
CRLF3-201ENST00000324238 RPL37AP61513 92 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms