RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 HIST3H2BBQ8N257 126 aa7.58□□□□□ -1.2
SYCN-201ENST00000318438 KRTAP4-16G5E9R7 235 aaPredicted RBP7.57□□□□□ -1.2
SYCN-201ENST00000318438 PPDPFQ9H3Y8 114 aa7.57□□□□□ -1.2
SYCN-201ENST00000318438 ETDCA0A1B0GVM5 59 aa7.56□□□□□ -1.2
SYCN-201ENST00000318438 DDTP30046 118 aa7.56□□□□□ -1.2
SYCN-201ENST00000318438 SNRPEP62304 92 aaKnown RBP7.56□□□□□ -1.2
SYCN-201ENST00000318438 ASB16-AS1Q495Z4 193 aa7.56□□□□□ -1.2
SYCN-201ENST00000318438 ADAMTSL4-AS1Q5T5F5 129 aa7.56□□□□□ -1.2
SYCN-201ENST00000318438 ATOH7Q8N100 152 aa7.56□□□□□ -1.2
SYCN-201ENST00000318438 TIMM17BO60830 172 aa7.55□□□□□ -1.2
SYCN-201ENST00000318438 SOSTDC1Q6X4U4 206 aa7.55□□□□□ -1.2
SYCN-201ENST00000318438 LITAFQ99732 161 aa7.55□□□□□ -1.2
SYCN-201ENST00000318438 HIST1H2BLQ99880 126 aa7.55□□□□□ -1.2
SYCN-201ENST00000318438 ZNF706Q9Y5V0 76 aaPredicted RBP7.55□□□□□ -1.2
SYCN-201ENST00000318438 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
SYCN-201ENST00000318438 NPC2P61916 151 aa7.54□□□□□ -1.2
SYCN-201ENST00000318438 SPRR4Q96PI1 79 aa7.54□□□□□ -1.2
SYCN-201ENST00000318438 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
SYCN-201ENST00000318438 IGLV6-57P01721 117 aa7.53□□□□□ -1.2
SYCN-201ENST00000318438 S100A7L2Q5SY68 101 aa7.53□□□□□ -1.2
SYCN-201ENST00000318438 TMA7Q9Y2S6 64 aaKnown RBP7.53□□□□□ -1.2
SYCN-201ENST00000318438 B5MCH6 92 aa7.52□□□□□ -1.21
SYCN-201ENST00000318438 AKR1D1P51857 326 aa7.52□□□□□ -1.21
SYCN-201ENST00000318438 MT1HP80294 61 aa7.52□□□□□ -1.21
SYCN-201ENST00000318438 LINC00304Q8N9R0 145 aa7.52□□□□□ -1.21
SYCN-201ENST00000318438 SMCR5Q8TEV8 140 aa7.52□□□□□ -1.21
SYCN-201ENST00000318438 TTTY13Q9BZ97 58 aa7.52□□□□□ -1.21
SYCN-201ENST00000318438 SPANXCQ9NY87 97 aa7.52□□□□□ -1.21
SYCN-201ENST00000318438 CFC1BP0CG36 223 aa7.51□□□□□ -1.21
SYCN-201ENST00000318438 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
SYCN-201ENST00000318438 Q6ZRX8 168 aa7.51□□□□□ -1.21
SYCN-201ENST00000318438 LINC00308Q8TCZ7 52 aa7.51□□□□□ -1.21
SYCN-201ENST00000318438 TRAV23DV6A0A075B6W5 121 aa7.5□□□□□ -1.21
SYCN-201ENST00000318438 C5orf52A6NGY3 159 aa7.49□□□□□ -1.21
SYCN-201ENST00000318438 SCGB1D1O95968 90 aa7.49□□□□□ -1.21
SYCN-201ENST00000318438 CTAG1AP78358 180 aa7.49□□□□□ -1.21
SYCN-201ENST00000318438 ANKRD39Q53RE8 183 aa7.49□□□□□ -1.21
SYCN-201ENST00000318438 C3orf22Q8N5N4 141 aa7.49□□□□□ -1.21
SYCN-201ENST00000318438 CBY1Q9Y3M2 126 aa7.49□□□□□ -1.21
SYCN-201ENST00000318438 SSPOA2VEC9 5147 aa7.48□□□□□ -1.21
SYCN-201ENST00000318438 ZNF73O43830 326 aaPredicted RBP7.48□□□□□ -1.21
SYCN-201ENST00000318438 LINC00483Q53H64 154 aa7.48□□□□□ -1.21
SYCN-201ENST00000318438 SCGB1D4Q6XE38 83 aa7.48□□□□□ -1.21
SYCN-201ENST00000318438 Q9BRP9 147 aa7.48□□□□□ -1.21
SYCN-201ENST00000318438 HSBP1L1C9JCN9 74 aa7.47□□□□□ -1.21
SYCN-201ENST00000318438 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
SYCN-201ENST00000318438 JOSD1Q15040 202 aaPredicted RBP7.47□□□□□ -1.21
SYCN-201ENST00000318438 KRTAP19-2Q3LHN2 52 aa7.47□□□□□ -1.21
SYCN-201ENST00000318438 SPANXDQ9BXN6 97 aa7.47□□□□□ -1.21
SYCN-201ENST00000318438 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.22
SYCN-201ENST00000318438 USH2AO75445 5202 aa7.46□□□□□ -1.22
SYCN-201ENST00000318438 ERC2-IT1O76042 136 aa7.45□□□□□ -1.22
SYCN-201ENST00000318438 KRTAP13-3Q3SY46 172 aa7.45□□□□□ -1.22
SYCN-201ENST00000318438 COPS9Q8WXC6 57 aa7.45□□□□□ -1.22
SYCN-201ENST00000318438 HINT1P49773 126 aaPredicted RBP7.44□□□□□ -1.22
SYCN-201ENST00000318438 GAGE2AQ6NT46 116 aa7.44□□□□□ -1.22
SYCN-201ENST00000318438 SPAG11AQ6PDA7 123 aa7.44□□□□□ -1.22
SYCN-201ENST00000318438 Q6ZVH6 145 aa7.44□□□□□ -1.22
SYCN-201ENST00000318438 LINC00518Q8N0U6 118 aa7.44□□□□□ -1.22
SYCN-201ENST00000318438 OR13C6PQ8NH95 151 aa7.44□□□□□ -1.22
SYCN-201ENST00000318438 IFITM1P13164 125 aa7.43□□□□□ -1.22
SYCN-201ENST00000318438 PCP2Q8IVA1 136 aa7.43□□□□□ -1.22
SYCN-201ENST00000318438 Q8NBF4 154 aa7.41□□□□□ -1.22
SYCN-201ENST00000318438 MOBPQ13875 183 aa7.39□□□□□ -1.23
SYCN-201ENST00000318438 C4orf48Q5BLP8 95 aa7.39□□□□□ -1.23
SYCN-201ENST00000318438 FP248Q71RG6 208 aaPredicted RBP7.39□□□□□ -1.23
SYCN-201ENST00000318438 DHRS4-AS1Q9P1J3 65 aa7.39□□□□□ -1.23
SYCN-201ENST00000318438 IGLV9-49A0A0B4J1Y8 123 aa7.38□□□□□ -1.23
SYCN-201ENST00000318438 ELOF1P60002 83 aaKnown RBP7.38□□□□□ -1.23
SYCN-201ENST00000318438 C6orf99Q4VX62 202 aa7.38□□□□□ -1.23
SYCN-201ENST00000318438 MUSTN1Q8IVN3 82 aa7.38□□□□□ -1.23
SYCN-201ENST00000318438 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
SYCN-201ENST00000318438 SPINK1P00995 79 aa7.37□□□□□ -1.23
SYCN-201ENST00000318438 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
SYCN-201ENST00000318438 ST20-AS1Q8NBB2 130 aa7.37□□□□□ -1.23
SYCN-201ENST00000318438 COX7BP24311 80 aa7.36□□□□□ -1.23
SYCN-201ENST00000318438 VAMP8Q9BV40 100 aa7.36□□□□□ -1.23
SYCN-201ENST00000318438 PAM16Q9Y3D7 125 aa7.36□□□□□ -1.23
SYCN-201ENST00000318438 TRBV7-6A0A0J9YX20 115 aa7.35□□□□□ -1.23
SYCN-201ENST00000318438 A6NDN8 102 aa7.35□□□□□ -1.23
SYCN-201ENST00000318438 SPATA45Q537H7 98 aa7.35□□□□□ -1.23
SYCN-201ENST00000318438 SYNE2Q8WXH0 6885 aaKnown RBP7.34□□□□□ -1.23
SYCN-201ENST00000318438 SPRR1BP22528 89 aa7.34□□□□□ -1.23
SYCN-201ENST00000318438 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
SYCN-201ENST00000318438 TRAV13-2A0A0B4J235 113 aa7.33□□□□□ -1.24
SYCN-201ENST00000318438 A0A1B0GWB2 263 aa7.33□□□□□ -1.24
SYCN-201ENST00000318438 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
SYCN-201ENST00000318438 SLC25A34Q6PIV7 304 aa7.33□□□□□ -1.24
SYCN-201ENST00000318438 M0R2T5 61 aa7.32□□□□□ -1.24
SYCN-201ENST00000318438 C14orf144Q96I85 54 aa7.31□□□□□ -1.24
SYCN-201ENST00000318438 A4D1N5 150 aa7.3□□□□□ -1.24
SYCN-201ENST00000318438 COX8AP10176 69 aa7.3□□□□□ -1.24
SYCN-201ENST00000318438 FLGP20930 4061 aaPredicted RBP7.29□□□□□ -1.24
SYCN-201ENST00000318438 PYY3Q5JQD4 70 aa7.29□□□□□ -1.24
SYCN-201ENST00000318438 Q8N377 158 aa7.29□□□□□ -1.24
SYCN-201ENST00000318438 SMIM11BQ8TCY0 68 aa7.29□□□□□ -1.24
SYCN-201ENST00000318438 LAMTOR3Q9UHA4 124 aa7.29□□□□□ -1.24
SYCN-201ENST00000318438 XP32Q5T750 250 aa7.28□□□□□ -1.24
SYCN-201ENST00000318438 HIST1H4GQ99525 98 aa7.28□□□□□ -1.24
SYCN-201ENST00000318438 MACF1Q9UPN3 7388 aaKnown RBP7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms