RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 HUWE1Q7Z6Z7 4374 aaKnown RBP12.82□□□□□ -0.36
AP3S1-201ENST00000316788 CXCL6P80162 114 aa12.82□□□□□ -0.36
AP3S1-201ENST00000316788 Q6ZVQ6 151 aa12.82□□□□□ -0.36
AP3S1-201ENST00000316788 MRAPQ8TCY5 172 aa12.81□□□□□ -0.36
AP3S1-201ENST00000316788 KCNQ1DNQ9H478 68 aa12.81□□□□□ -0.36
AP3S1-201ENST00000316788 FAM19A1Q7Z5A9 133 aa12.8□□□□□ -0.36
AP3S1-201ENST00000316788 TRAV10A0A0B4J240 114 aa12.79□□□□□ -0.36
AP3S1-201ENST00000316788 M0R2N4 97 aa12.79□□□□□ -0.36
AP3S1-201ENST00000316788 LINC01547P58512 204 aaPredicted RBP12.79□□□□□ -0.36
AP3S1-201ENST00000316788 FBN3Q75N90 2809 aa12.77□□□□□ -0.36
AP3S1-201ENST00000316788 SMIM20Q8N5G0 67 aa12.77□□□□□ -0.36
AP3S1-201ENST00000316788 IGLV5-37A0A075B6J1 123 aa12.76□□□□□ -0.37
AP3S1-201ENST00000316788 NKAPP1Q8N9T2 125 aa12.76□□□□□ -0.37
AP3S1-201ENST00000316788 TMEM258P61165 79 aa12.74□□□□□ -0.37
AP3S1-201ENST00000316788 RMI2Q96E14 147 aa12.74□□□□□ -0.37
AP3S1-201ENST00000316788 C7orf33Q8WU49 177 aa12.73□□□□□ -0.37
AP3S1-201ENST00000316788 HAMPP81172 84 aa12.71□□□□□ -0.37
AP3S1-201ENST00000316788 TM2D3Q9BRN9 247 aa12.71□□□□□ -0.37
AP3S1-201ENST00000316788 LINC00588Q9Y4M8 146 aa12.71□□□□□ -0.37
AP3S1-201ENST00000316788 PRYO14603 147 aa12.71□□□□□ -0.38
AP3S1-201ENST00000316788 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.38
AP3S1-201ENST00000316788 RPS28P62857 69 aaKnown RBP12.69□□□□□ -0.38
AP3S1-201ENST00000316788 DHRS4-AS1Q9P1J3 65 aa12.69□□□□□ -0.38
AP3S1-201ENST00000316788 TENM3Q9P273 2699 aa12.68□□□□□ -0.38
AP3S1-201ENST00000316788 COL7A1Q02388 2944 aa12.68□□□□□ -0.38
AP3S1-201ENST00000316788 TRAV7A0A075B6U4 112 aa12.68□□□□□ -0.38
AP3S1-201ENST00000316788 SPRR1AP35321 89 aa12.67□□□□□ -0.38
AP3S1-201ENST00000316788 SVIPQ8NHG7 77 aa12.67□□□□□ -0.38
AP3S1-201ENST00000316788 A0A1B0GW54 56 aa12.66□□□□□ -0.38
AP3S1-201ENST00000316788 B9D2Q9BPU9 175 aa12.66□□□□□ -0.38
AP3S1-201ENST00000316788 CYSTM1Q9H1C7 97 aa12.66□□□□□ -0.38
AP3S1-201ENST00000316788 KRTAP4-16G5E9R7 235 aaPredicted RBP12.65□□□□□ -0.38
AP3S1-201ENST00000316788 IGLV5-48A0A075B6I7 105 aa12.65□□□□□ -0.38
AP3S1-201ENST00000316788 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.38
AP3S1-201ENST00000316788 J3KT08 172 aa12.65□□□□□ -0.38
AP3S1-201ENST00000316788 Q6ZRX8 168 aa12.65□□□□□ -0.38
AP3S1-201ENST00000316788 IGLV1-50A0A075B6I6 118 aa12.64□□□□□ -0.39
AP3S1-201ENST00000316788 Q8N377 158 aa12.62□□□□□ -0.39
AP3S1-201ENST00000316788 CASC10Q5T4H9 136 aa12.59□□□□□ -0.39
AP3S1-201ENST00000316788 ETDCA0A1B0GVM5 59 aa12.58□□□□□ -0.4
AP3S1-201ENST00000316788 KRTAP7-1Q8IUC3 87 aa12.57□□□□□ -0.4
AP3S1-201ENST00000316788 Q9BRP9 147 aa12.57□□□□□ -0.4
AP3S1-201ENST00000316788 TNP2Q05952 138 aa12.56□□□□□ -0.4
AP3S1-201ENST00000316788 TGP01266 2768 aa12.56□□□□□ -0.4
AP3S1-201ENST00000316788 NREPQ16612 68 aa12.55□□□□□ -0.4
AP3S1-201ENST00000316788 MRPL55Q7Z7F7 128 aaKnown RBP12.55□□□□□ -0.4
AP3S1-201ENST00000316788 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
AP3S1-201ENST00000316788 KLKP1Q107X0 134 aa12.54□□□□□ -0.4
AP3S1-201ENST00000316788 C20orf197Q8N268 126 aa12.54□□□□□ -0.4
AP3S1-201ENST00000316788 FAM168BA1KXE4 195 aa12.54□□□□□ -0.4
AP3S1-201ENST00000316788 RPL37AP8A6NKH3 93 aa12.52□□□□□ -0.41
AP3S1-201ENST00000316788 DEFB105AQ8NG35 78 aa12.52□□□□□ -0.41
AP3S1-201ENST00000316788 STAB2Q8WWQ8 2551 aa12.52□□□□□ -0.41
AP3S1-201ENST00000316788 FUSP35637 526 aaKnown RBP eCLIP12.51□□□□□ -0.41
AP3S1-201ENST00000316788 SCXQ7RTU7 201 aa12.51□□□□□ -0.41
AP3S1-201ENST00000316788 IGKV4-1P06312 121 aa12.5□□□□□ -0.41
AP3S1-201ENST00000316788 ERC2-IT1O76042 136 aa12.49□□□□□ -0.41
AP3S1-201ENST00000316788 DNAH1Q9P2D7 4330 aa12.49□□□□□ -0.41
AP3S1-201ENST00000316788 BPY2O14599 106 aa12.48□□□□□ -0.41
AP3S1-201ENST00000316788 FAM19A5Q7Z5A7 132 aaPredicted RBP12.48□□□□□ -0.41
AP3S1-201ENST00000316788 DNAH7Q8WXX0 4024 aa12.47□□□□□ -0.41
AP3S1-201ENST00000316788 CNBPP62633 177 aaKnown RBP12.47□□□□□ -0.41
AP3S1-201ENST00000316788 REG3GQ6UW15 175 aa12.47□□□□□ -0.41
AP3S1-201ENST00000316788 Q8NBF4 154 aa12.47□□□□□ -0.41
AP3S1-201ENST00000316788 C1orf137Q5JT78 98 aa12.46□□□□□ -0.41
AP3S1-201ENST00000316788 SPRR4Q96PI1 79 aa12.46□□□□□ -0.41
AP3S1-201ENST00000316788 A0A1W2PNM2 257 aa12.45□□□□□ -0.42
AP3S1-201ENST00000316788 H7BZZ5 65 aa12.45□□□□□ -0.42
AP3S1-201ENST00000316788 NDUFC1O43677 76 aa12.45□□□□□ -0.42
AP3S1-201ENST00000316788 C16orf90A8MZG2 172 aa12.44□□□□□ -0.42
AP3S1-201ENST00000316788 FAM236DA0A1B0GTK5 79 aa12.43□□□□□ -0.42
AP3S1-201ENST00000316788 C3orf84H3BNL1 204 aa12.43□□□□□ -0.42
AP3S1-201ENST00000316788 FAM236CP0DP71 79 aa12.43□□□□□ -0.42
AP3S1-201ENST00000316788 ST20-AS1Q8NBB2 130 aa12.43□□□□□ -0.42
AP3S1-201ENST00000316788 UBE2BP63146 152 aa12.42□□□□□ -0.42
AP3S1-201ENST00000316788 STARD9Q9P2P6 4700 aa12.4□□□□□ -0.42
AP3S1-201ENST00000316788 CSMD3Q7Z407 3707 aa12.4□□□□□ -0.42
AP3S1-201ENST00000316788 C14orf177Q52M58 125 aa12.4□□□□□ -0.43
AP3S1-201ENST00000316788 SMIM29Q86T20 159 aa12.38□□□□□ -0.43
AP3S1-201ENST00000316788 OCR1Q9BZK8 76 aa12.38□□□□□ -0.43
AP3S1-201ENST00000316788 Q8N9L7 120 aa12.37□□□□□ -0.43
AP3S1-201ENST00000316788 KRTAP1-5Q9BYS1 174 aa12.37□□□□□ -0.43
AP3S1-201ENST00000316788 A0A096LNI7 61 aa12.37□□□□□ -0.43
AP3S1-201ENST00000316788 EPM2AB3EWF7 344 aa12.37□□□□□ -0.43
AP3S1-201ENST00000316788 PLECQ15149 4684 aaKnown RBP12.36□□□□□ -0.43
AP3S1-201ENST00000316788 DYNC2H1Q8NCM8 4307 aaKnown RBP12.35□□□□□ -0.43
AP3S1-201ENST00000316788 IGLV8-61A0A075B6I0 122 aa12.35□□□□□ -0.43
AP3S1-201ENST00000316788 OXTP01178 125 aa12.35□□□□□ -0.43
AP3S1-201ENST00000316788 F8WEM9 126 aa12.34□□□□□ -0.43
AP3S1-201ENST00000316788 ATP5EP56381 51 aaPredicted RBP12.34□□□□□ -0.43
AP3S1-201ENST00000316788 APLNQ9ULZ1 77 aa12.34□□□□□ -0.43
AP3S1-201ENST00000316788 PKIGQ9Y2B9 76 aa12.34□□□□□ -0.43
AP3S1-201ENST00000316788 SERP1Q9Y6X1 66 aa12.34□□□□□ -0.43
AP3S1-201ENST00000316788 SNURFQ9Y675 71 aa12.34□□□□□ -0.43
AP3S1-201ENST00000316788 TMEM254Q8TBM7 123 aa12.33□□□□□ -0.44
AP3S1-201ENST00000316788 PSCAO43653 123 aa12.32□□□□□ -0.44
AP3S1-201ENST00000316788 A0A1W2PNN7 141 aa12.31□□□□□ -0.44
AP3S1-201ENST00000316788 LINC00476Q8WZB0 136 aa12.31□□□□□ -0.44
AP3S1-201ENST00000316788 UBE2DNLQ8IWF7 75 aa12.31□□□□□ -0.44
AP3S1-201ENST00000316788 H0Y9J4 135 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms