RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ATP5EP2Q5VTU8 51 aa9.3□□□□□ -0.92
VRK3-201ENST00000316763 PLECQ15149 4684 aaKnown RBP9.29□□□□□ -0.92
VRK3-201ENST00000316763 ATOX1O00244 68 aa9.29□□□□□ -0.92
VRK3-201ENST00000316763 Q6ZQT0 140 aa9.29□□□□□ -0.92
VRK3-201ENST00000316763 DSCR8Q96T75 97 aa9.29□□□□□ -0.92
VRK3-201ENST00000316763 UBL5Q9BZL1 73 aa9.29□□□□□ -0.92
VRK3-201ENST00000316763 HIST1H4AP62805 103 aaKnown RBP9.28□□□□□ -0.92
VRK3-201ENST00000316763 Q6ZRP5 223 aa9.27□□□□□ -0.93
VRK3-201ENST00000316763 RMI2Q96E14 147 aa9.27□□□□□ -0.93
VRK3-201ENST00000316763 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
VRK3-201ENST00000316763 UQCRQO14949 82 aa9.25□□□□□ -0.93
VRK3-201ENST00000316763 UBE2DNLQ8IWF7 75 aa9.25□□□□□ -0.93
VRK3-201ENST00000316763 C3orf22Q8N5N4 141 aa9.25□□□□□ -0.93
VRK3-201ENST00000316763 SS18L2Q9UHA2 77 aa9.25□□□□□ -0.93
VRK3-201ENST00000316763 LYSTQ99698 3801 aa9.25□□□□□ -0.93
VRK3-201ENST00000316763 TLX1NBP0CAT3 122 aa9.24□□□□□ -0.93
VRK3-201ENST00000316763 LINC00528Q8N1L1 170 aa9.23□□□□□ -0.93
VRK3-201ENST00000316763 COX7CP15954 63 aa9.22□□□□□ -0.93
VRK3-201ENST00000316763 KRTAP1-5Q9BYS1 174 aa9.22□□□□□ -0.93
VRK3-201ENST00000316763 LY6G6CO95867 125 aa9.21□□□□□ -0.93
VRK3-201ENST00000316763 C9orf153Q5TBE3 101 aa9.21□□□□□ -0.93
VRK3-201ENST00000316763 LINC00476Q8WZB0 136 aa9.21□□□□□ -0.93
VRK3-201ENST00000316763 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.93
VRK3-201ENST00000316763 USP17L23D6RBM5 183 aa9.21□□□□□ -0.94
VRK3-201ENST00000316763 KCNQ1DNQ9H478 68 aa9.21□□□□□ -0.94
VRK3-201ENST00000316763 A0A087WVE0 104 aa9.2□□□□□ -0.94
VRK3-201ENST00000316763 TRBV7-4A0A0J9YYF1 115 aa9.19□□□□□ -0.94
VRK3-201ENST00000316763 C7orf33Q8WU49 177 aa9.18□□□□□ -0.94
VRK3-201ENST00000316763 DNAH1Q9P2D7 4330 aa9.18□□□□□ -0.94
VRK3-201ENST00000316763 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
VRK3-201ENST00000316763 VPS13DQ5THJ4 4388 aa9.16□□□□□ -0.94
VRK3-201ENST00000316763 IGLV5-37A0A075B6J1 123 aa9.16□□□□□ -0.94
VRK3-201ENST00000316763 SERP2Q8N6R1 65 aa9.16□□□□□ -0.94
VRK3-201ENST00000316763 NBDYA0A0U1RRE5 68 aa9.15□□□□□ -0.94
VRK3-201ENST00000316763 M0R2N4 97 aa9.15□□□□□ -0.94
VRK3-201ENST00000316763 Q6ZVQ6 151 aa9.15□□□□□ -0.94
VRK3-201ENST00000316763 PRYO14603 147 aa9.15□□□□□ -0.95
VRK3-201ENST00000316763 LCE6AA0A183 80 aa9.14□□□□□ -0.95
VRK3-201ENST00000316763 LINC01547P58512 204 aaPredicted RBP9.14□□□□□ -0.95
VRK3-201ENST00000316763 HAMPP81172 84 aa9.14□□□□□ -0.95
VRK3-201ENST00000316763 FAM19A1Q7Z5A9 133 aa9.14□□□□□ -0.95
VRK3-201ENST00000316763 DHRS4-AS1Q9P1J3 65 aa9.14□□□□□ -0.95
VRK3-201ENST00000316763 ALMS1Q8TCU4 4167 aa9.13□□□□□ -0.95
VRK3-201ENST00000316763 LOC107984640A0A0U1RRK4 108 aa9.13□□□□□ -0.95
VRK3-201ENST00000316763 CRYGAP11844 174 aa9.13□□□□□ -0.95
VRK3-201ENST00000316763 CXCL6P80162 114 aa9.13□□□□□ -0.95
VRK3-201ENST00000316763 IGLV1-50A0A075B6I6 118 aa9.11□□□□□ -0.95
VRK3-201ENST00000316763 ETDCA0A1B0GVM5 59 aa9.11□□□□□ -0.95
VRK3-201ENST00000316763 KMT2AQ03164 3969 aa9.11□□□□□ -0.95
VRK3-201ENST00000316763 RPL37AP8A6NKH3 93 aa9.1□□□□□ -0.95
VRK3-201ENST00000316763 Q6ZRX8 168 aa9.1□□□□□ -0.95
VRK3-201ENST00000316763 BCE1O60756 84 aa9.09□□□□□ -0.95
VRK3-201ENST00000316763 FAM168BA1KXE4 195 aa9.09□□□□□ -0.95
VRK3-201ENST00000316763 Q6ZR54 194 aa9.09□□□□□ -0.95
VRK3-201ENST00000316763 SPRR1AP35321 89 aa9.08□□□□□ -0.96
VRK3-201ENST00000316763 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
VRK3-201ENST00000316763 DEFB105AQ8NG35 78 aa9.08□□□□□ -0.96
VRK3-201ENST00000316763 KRTAP4-16G5E9R7 235 aaPredicted RBP9.07□□□□□ -0.96
VRK3-201ENST00000316763 Q6ZRN7 208 aaPredicted RBP9.07□□□□□ -0.96
VRK3-201ENST00000316763 FAM19A5Q7Z5A7 132 aaPredicted RBP9.07□□□□□ -0.96
VRK3-201ENST00000316763 Q8N377 158 aa9.07□□□□□ -0.96
VRK3-201ENST00000316763 PSCAO43653 123 aa9.06□□□□□ -0.96
VRK3-201ENST00000316763 SMIM20Q8N5G0 67 aa9.05□□□□□ -0.96
VRK3-201ENST00000316763 SACSQ9NZJ4 4579 aa9.05□□□□□ -0.96
VRK3-201ENST00000316763 DNAH6Q9C0G6 4158 aa9.04□□□□□ -0.96
VRK3-201ENST00000316763 IGLV5-48A0A075B6I7 105 aa9.04□□□□□ -0.96
VRK3-201ENST00000316763 KRTAP7-1Q8IUC3 87 aa9.04□□□□□ -0.96
VRK3-201ENST00000316763 Q9BRP9 147 aa9.04□□□□□ -0.96
VRK3-201ENST00000316763 HYDINQ4G0P3 5121 aa9.03□□□□□ -0.96
VRK3-201ENST00000316763 NREPQ16612 68 aa9.03□□□□□ -0.96
VRK3-201ENST00000316763 KMT2CQ8NEZ4 4911 aaKnown RBP9.03□□□□□ -0.96
VRK3-201ENST00000316763 A0A1B0GW54 56 aa9.02□□□□□ -0.97
VRK3-201ENST00000316763 LRCOL1A6NCL2 159 aa9.02□□□□□ -0.97
VRK3-201ENST00000316763 REG3GQ6UW15 175 aa9.02□□□□□ -0.97
VRK3-201ENST00000316763 CNBPP62633 177 aaKnown RBP9.01□□□□□ -0.97
VRK3-201ENST00000316763 C14orf177Q52M58 125 aa9.01□□□□□ -0.97
VRK3-201ENST00000316763 DNAH10Q8IVF4 4471 aa9.01□□□□□ -0.97
VRK3-201ENST00000316763 TRAV7A0A075B6U4 112 aa9.01□□□□□ -0.97
VRK3-201ENST00000316763 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
VRK3-201ENST00000316763 UBE2BP63146 152 aa9.01□□□□□ -0.97
VRK3-201ENST00000316763 C1orf134Q5TEV5 83 aa9.01□□□□□ -0.97
VRK3-201ENST00000316763 C16orf90A8MZG2 172 aa9□□□□□ -0.97
VRK3-201ENST00000316763 SCXQ7RTU7 201 aa9□□□□□ -0.97
VRK3-201ENST00000316763 TMEM258P61165 79 aa8.99□□□□□ -0.97
VRK3-201ENST00000316763 ST20-AS1Q8NBB2 130 aa8.97□□□□□ -0.97
VRK3-201ENST00000316763 A0A096LNI7 61 aa8.97□□□□□ -0.97
VRK3-201ENST00000316763 C1orf137Q5JT78 98 aa8.97□□□□□ -0.97
VRK3-201ENST00000316763 BPY2O14599 106 aa8.96□□□□□ -0.97
VRK3-201ENST00000316763 RTL8CO15255 209 aa8.96□□□□□ -0.97
VRK3-201ENST00000316763 TNP2Q05952 138 aa8.96□□□□□ -0.97
VRK3-201ENST00000316763 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
VRK3-201ENST00000316763 ERC2-IT1O76042 136 aa8.95□□□□□ -0.98
VRK3-201ENST00000316763 CYSTM1Q9H1C7 97 aa8.95□□□□□ -0.98
VRK3-201ENST00000316763 PKIGQ9Y2B9 76 aa8.95□□□□□ -0.98
VRK3-201ENST00000316763 DNAH2Q9P225 4427 aa8.94□□□□□ -0.98
VRK3-201ENST00000316763 RYR2Q92736 4967 aa8.94□□□□□ -0.98
VRK3-201ENST00000316763 A0A087WTM6 91 aa8.93□□□□□ -0.98
VRK3-201ENST00000316763 F8WEM9 126 aa8.93□□□□□ -0.98
VRK3-201ENST00000316763 C20orf197Q8N268 126 aa8.93□□□□□ -0.98
VRK3-201ENST00000316763 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms