RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 MYCBP2O75592 4640 aa4.95□□□□□ -1.62
CNOT4-201ENST00000315544 TRGV4A0A0C4DH28 118 aa4.94□□□□□ -1.62
CNOT4-201ENST00000315544 Q8N377 158 aa4.94□□□□□ -1.62
CNOT4-201ENST00000315544 A0A087WVE0 104 aa4.94□□□□□ -1.62
CNOT4-201ENST00000315544 Q6ZR54 194 aa4.94□□□□□ -1.62
CNOT4-201ENST00000315544 Q6ZRN7 208 aaPredicted RBP4.94□□□□□ -1.62
CNOT4-201ENST00000315544 APLNQ9ULZ1 77 aa4.94□□□□□ -1.62
CNOT4-201ENST00000315544 LECT2O14960 151 aa4.93□□□□□ -1.62
CNOT4-201ENST00000315544 SERTAD4-AS1Q5TG53 156 aa4.93□□□□□ -1.62
CNOT4-201ENST00000315544 COPS9Q8WXC6 57 aa4.93□□□□□ -1.62
CNOT4-201ENST00000315544 KRTAP1-5Q9BYS1 174 aa4.93□□□□□ -1.62
CNOT4-201ENST00000315544 ATP5EP2Q5VTU8 51 aa4.93□□□□□ -1.62
CNOT4-201ENST00000315544 Q6ZTC4 211 aa4.93□□□□□ -1.62
CNOT4-201ENST00000315544 FP248Q71RG6 208 aaPredicted RBP4.93□□□□□ -1.62
CNOT4-201ENST00000315544 TRGV2A0A075B6R0 118 aa4.92□□□□□ -1.62
CNOT4-201ENST00000315544 LINC01556Q5JQF7 62 aa4.92□□□□□ -1.62
CNOT4-201ENST00000315544 ERC2-IT1O76042 136 aa4.92□□□□□ -1.62
CNOT4-201ENST00000315544 KRTAP29-1A8MX34 341 aaPredicted RBP4.91□□□□□ -1.62
CNOT4-201ENST00000315544 H7C2G1 150 aa4.91□□□□□ -1.62
CNOT4-201ENST00000315544 ZNF561-AS1K7EIQ3 104 aa4.91□□□□□ -1.62
CNOT4-201ENST00000315544 ESRGQ1W209 222 aa4.91□□□□□ -1.62
CNOT4-201ENST00000315544 INAFM2P0DMQ5 153 aa4.91□□□□□ -1.62
CNOT4-201ENST00000315544 FAM19A1Q7Z5A9 133 aa4.91□□□□□ -1.62
CNOT4-201ENST00000315544 MRAPQ8TCY5 172 aa4.91□□□□□ -1.62
CNOT4-201ENST00000315544 TRAV10A0A0B4J240 114 aa4.91□□□□□ -1.62
CNOT4-201ENST00000315544 KRTAP13-3Q3SY46 172 aa4.91□□□□□ -1.62
CNOT4-201ENST00000315544 KRTAP17-1Q9BYP8 105 aa4.91□□□□□ -1.62
CNOT4-201ENST00000315544 IGLV1-50A0A075B6I6 118 aa4.9□□□□□ -1.62
CNOT4-201ENST00000315544 CIRBPQ14011 172 aaKnown RBP4.9□□□□□ -1.62
CNOT4-201ENST00000315544 WFDC10BQ8IUB3 73 aa4.9□□□□□ -1.62
CNOT4-201ENST00000315544 SERP2Q8N6R1 65 aa4.9□□□□□ -1.62
CNOT4-201ENST00000315544 DYNLRB2Q8TF09 96 aa4.9□□□□□ -1.62
CNOT4-201ENST00000315544 Q96NJ1 140 aa4.9□□□□□ -1.62
CNOT4-201ENST00000315544 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
CNOT4-201ENST00000315544 NDUFC2-KCTD14E9PQ53 114 aa4.9□□□□□ -1.62
CNOT4-201ENST00000315544 SNCGO76070 127 aa4.9□□□□□ -1.62
CNOT4-201ENST00000315544 Q6ZVQ6 151 aa4.9□□□□□ -1.62
CNOT4-201ENST00000315544 A0A1W2PNM2 257 aa4.9□□□□□ -1.63
CNOT4-201ENST00000315544 J3QL48 77 aa4.9□□□□□ -1.63
CNOT4-201ENST00000315544 TMEM256-PLSCR3K7ERE1 68 aa4.9□□□□□ -1.63
CNOT4-201ENST00000315544 A0A0U1RQV1 116 aa4.89□□□□□ -1.63
CNOT4-201ENST00000315544 RPL35AP18077 110 aaKnown RBP4.89□□□□□ -1.63
CNOT4-201ENST00000315544 ORMDL1Q9P0S3 153 aa4.89□□□□□ -1.63
CNOT4-201ENST00000315544 LINC00588Q9Y4M8 146 aa4.89□□□□□ -1.63
CNOT4-201ENST00000315544 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
CNOT4-201ENST00000315544 HTN1P15515 57 aa4.89□□□□□ -1.63
CNOT4-201ENST00000315544 SPRR1BP22528 89 aa4.89□□□□□ -1.63
CNOT4-201ENST00000315544 C6orf99Q4VX62 202 aa4.89□□□□□ -1.63
CNOT4-201ENST00000315544 Q6ZRU5 148 aa4.89□□□□□ -1.63
CNOT4-201ENST00000315544 MGAM2Q2M2H8 2515 aa4.89□□□□□ -1.63
CNOT4-201ENST00000315544 COX6CP09669 75 aa4.89□□□□□ -1.63
CNOT4-201ENST00000315544 DSCR10P59022 87 aa4.88□□□□□ -1.63
CNOT4-201ENST00000315544 JMJD7-PLA2G4BH0Y9G9 81 aa4.88□□□□□ -1.63
CNOT4-201ENST00000315544 CRPP02741 224 aa4.88□□□□□ -1.63
CNOT4-201ENST00000315544 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
CNOT4-201ENST00000315544 USP17L23D6RBM5 183 aa4.87□□□□□ -1.63
CNOT4-201ENST00000315544 XCL1P47992 114 aa4.87□□□□□ -1.63
CNOT4-201ENST00000315544 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.87□□□□□ -1.63
CNOT4-201ENST00000315544 M0R378 163 aa4.86□□□□□ -1.63
CNOT4-201ENST00000315544 APOC4P55056 127 aa4.86□□□□□ -1.63
CNOT4-201ENST00000315544 KRTAP3-3Q9BYR6 98 aa4.86□□□□□ -1.63
CNOT4-201ENST00000315544 KRTAP3-2Q9BYR7 98 aa4.86□□□□□ -1.63
CNOT4-201ENST00000315544 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
CNOT4-201ENST00000315544 LINC00476Q8WZB0 136 aa4.86□□□□□ -1.63
CNOT4-201ENST00000315544 LRCOL1A6NCL2 159 aa4.85□□□□□ -1.63
CNOT4-201ENST00000315544 ATOX1O00244 68 aa4.85□□□□□ -1.63
CNOT4-201ENST00000315544 A0A1B0GW54 56 aa4.85□□□□□ -1.63
CNOT4-201ENST00000315544 A0A0U1RRA0 63 aa4.84□□□□□ -1.63
CNOT4-201ENST00000315544 CLPSL2Q6UWE3 100 aa4.84□□□□□ -1.63
CNOT4-201ENST00000315544 CNBPP62633 177 aaKnown RBP4.84□□□□□ -1.63
CNOT4-201ENST00000315544 KHDC1LQ5JSQ8 128 aa4.84□□□□□ -1.63
CNOT4-201ENST00000315544 TRAV23DV6A0A075B6W5 121 aa4.84□□□□□ -1.64
CNOT4-201ENST00000315544 hADV29S1A0JD25 119 aa4.84□□□□□ -1.64
CNOT4-201ENST00000315544 ZNF73O43830 326 aaPredicted RBP4.84□□□□□ -1.64
CNOT4-201ENST00000315544 TMEM258P61165 79 aa4.84□□□□□ -1.64
CNOT4-201ENST00000315544 DEFB135Q30KP9 77 aa4.84□□□□□ -1.64
CNOT4-201ENST00000315544 PLAC8Q9NZF1 115 aa4.84□□□□□ -1.64
CNOT4-201ENST00000315544 Q6ZRX8 168 aa4.83□□□□□ -1.64
CNOT4-201ENST00000315544 FAM168BA1KXE4 195 aa4.82□□□□□ -1.64
CNOT4-201ENST00000315544 H0Y9J4 135 aa4.82□□□□□ -1.64
CNOT4-201ENST00000315544 FAM229BQ4G0N7 80 aa4.82□□□□□ -1.64
CNOT4-201ENST00000315544 NUPR2A6NF83 97 aa4.82□□□□□ -1.64
CNOT4-201ENST00000315544 PFN2P35080 140 aa4.82□□□□□ -1.64
CNOT4-201ENST00000315544 GHRHP01286 108 aa4.82□□□□□ -1.64
CNOT4-201ENST00000315544 H3BQ85 93 aa4.81□□□□□ -1.64
CNOT4-201ENST00000315544 FAM19A5Q7Z5A7 132 aaPredicted RBP4.81□□□□□ -1.64
CNOT4-201ENST00000315544 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
CNOT4-201ENST00000315544 DEFB4AO15263 64 aa4.81□□□□□ -1.64
CNOT4-201ENST00000315544 KRTAP10-4P60372 401 aaPredicted RBP4.81□□□□□ -1.64
CNOT4-201ENST00000315544 LINC00158P58513 81 aa4.8□□□□□ -1.64
CNOT4-201ENST00000315544 SPAG11BQ08648 103 aa4.8□□□□□ -1.64
CNOT4-201ENST00000315544 TRAV7A0A075B6U4 112 aa4.8□□□□□ -1.64
CNOT4-201ENST00000315544 UBE2L6O14933 153 aa4.8□□□□□ -1.64
CNOT4-201ENST00000315544 LINC00483Q53H64 154 aa4.8□□□□□ -1.64
CNOT4-201ENST00000315544 RETNQ9HD89 108 aa4.8□□□□□ -1.64
CNOT4-201ENST00000315544 DEFB130BP0DP73 79 aa4.79□□□□□ -1.64
CNOT4-201ENST00000315544 DEFB130AP0DP74 79 aa4.79□□□□□ -1.64
CNOT4-201ENST00000315544 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
CNOT4-201ENST00000315544 Q6ZQY7 126 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms