RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 IGKV2D-30A0A075B6S6 120 aa9.12□□□□□ -0.95
SPAST-201ENST00000315285 IGKV2-30P06310 120 aa9.12□□□□□ -0.95
SPAST-201ENST00000315285 RTL8CO15255 209 aa9.11□□□□□ -0.95
SPAST-201ENST00000315285 K7EQZ3 153 aa9.11□□□□□ -0.95
SPAST-201ENST00000315285 KRTAP10-11P60412 298 aa9.1□□□□□ -0.95
SPAST-201ENST00000315285 SPACA4Q8TDM5 124 aa9.1□□□□□ -0.95
SPAST-201ENST00000315285 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
SPAST-201ENST00000315285 MGAQ8IWI9 3026 aa9.09□□□□□ -0.95
SPAST-201ENST00000315285 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
SPAST-201ENST00000315285 ERC2-IT1O76042 136 aa9.09□□□□□ -0.95
SPAST-201ENST00000315285 ATRQ13535 2644 aa9.09□□□□□ -0.95
SPAST-201ENST00000315285 Q8N377 158 aa9.07□□□□□ -0.96
SPAST-201ENST00000315285 A8MWP4 228 aa9.06□□□□□ -0.96
SPAST-201ENST00000315285 ACYP2P14621 99 aa9.05□□□□□ -0.96
SPAST-201ENST00000315285 IGFL1Q6UW32 110 aa9.04□□□□□ -0.96
SPAST-201ENST00000315285 KLKP1Q107X0 134 aa9.04□□□□□ -0.96
SPAST-201ENST00000315285 SPAG11AQ6PDA7 123 aa9.04□□□□□ -0.96
SPAST-201ENST00000315285 ZNF292O60281 2723 aa9.03□□□□□ -0.96
SPAST-201ENST00000315285 CFAP46Q8IYW2 2715 aa9.03□□□□□ -0.96
SPAST-201ENST00000315285 K7EIL1 84 aa9.03□□□□□ -0.96
SPAST-201ENST00000315285 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.96
SPAST-201ENST00000315285 KRTAP1-1Q07627 177 aa9.02□□□□□ -0.97
SPAST-201ENST00000315285 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
SPAST-201ENST00000315285 A0A1B0GU69 56 aa9.02□□□□□ -0.97
SPAST-201ENST00000315285 TLX1NBP0CAT3 122 aa9.02□□□□□ -0.97
SPAST-201ENST00000315285 HELZ2Q9BYK8 2649 aaKnown RBP9.01□□□□□ -0.97
SPAST-201ENST00000315285 LINC00313P59037 77 aa9.01□□□□□ -0.97
SPAST-201ENST00000315285 PRUNE2Q8WUY3 3088 aa9.01□□□□□ -0.97
SPAST-201ENST00000315285 LINC01600Q96MT4 127 aa9□□□□□ -0.97
SPAST-201ENST00000315285 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
SPAST-201ENST00000315285 WDFY4Q6ZS81 3184 aa9□□□□□ -0.97
SPAST-201ENST00000315285 UNC80Q8N2C7 3258 aa9□□□□□ -0.97
SPAST-201ENST00000315285 MAST4O15021 2626 aa9□□□□□ -0.97
SPAST-201ENST00000315285 A0A0G2JQZ4 141 aa8.97□□□□□ -0.97
SPAST-201ENST00000315285 A0A1W2PNN7 141 aa8.97□□□□□ -0.97
SPAST-201ENST00000315285 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
SPAST-201ENST00000315285 H7BZZ5 65 aa8.96□□□□□ -0.97
SPAST-201ENST00000315285 OBSCN-AS1Q96MR7 158 aa8.96□□□□□ -0.97
SPAST-201ENST00000315285 MRPL34Q9BQ48 92 aaKnown RBP8.96□□□□□ -0.97
SPAST-201ENST00000315285 LOC101927531A0A1B0GV80 90 aa8.96□□□□□ -0.98
SPAST-201ENST00000315285 AKAP13Q12802 2813 aa8.95□□□□□ -0.98
SPAST-201ENST00000315285 TYMSOSQ8TAI1 123 aa8.94□□□□□ -0.98
SPAST-201ENST00000315285 CASC10Q5T4H9 136 aa8.94□□□□□ -0.98
SPAST-201ENST00000315285 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
SPAST-201ENST00000315285 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
SPAST-201ENST00000315285 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
SPAST-201ENST00000315285 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
SPAST-201ENST00000315285 COA5Q86WW8 74 aa8.91□□□□□ -0.98
SPAST-201ENST00000315285 A8MUN3 132 aa8.9□□□□□ -0.98
SPAST-201ENST00000315285 C8orf17Q9NRJ1 99 aa8.9□□□□□ -0.98
SPAST-201ENST00000315285 CHD6Q8TD26 2715 aa8.9□□□□□ -0.98
SPAST-201ENST00000315285 TRIOO75962 3097 aa8.89□□□□□ -0.99
SPAST-201ENST00000315285 XIRP2A4UGR9 3374 aa8.88□□□□□ -0.99
SPAST-201ENST00000315285 ZNF861PO60384 105 aa8.88□□□□□ -0.99
SPAST-201ENST00000315285 VPS13AQ96RL7 3174 aa8.88□□□□□ -0.99
SPAST-201ENST00000315285 IGLV5-48A0A075B6I7 105 aa8.87□□□□□ -0.99
SPAST-201ENST00000315285 Q96NJ1 140 aa8.87□□□□□ -0.99
SPAST-201ENST00000315285 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
SPAST-201ENST00000315285 A0A087WTM6 91 aa8.86□□□□□ -0.99
SPAST-201ENST00000315285 A0A1B0GVX0 72 aa8.86□□□□□ -0.99
SPAST-201ENST00000315285 MAP1AP78559 2803 aaPredicted RBP8.85□□□□□ -0.99
SPAST-201ENST00000315285 WWC2-AS2Q96NR7 200 aa8.85□□□□□ -0.99
SPAST-201ENST00000315285 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
SPAST-201ENST00000315285 ATP11AUNQ6ZP68 121 aa8.85□□□□□ -0.99
SPAST-201ENST00000315285 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
SPAST-201ENST00000315285 SSBP3-AS1Q7Z2R9 100 aa8.83□□□□□ -1
SPAST-201ENST00000315285 CYP4F30PQ9H0H9 118 aa8.83□□□□□ -1
SPAST-201ENST00000315285 DSCR10P59022 87 aa8.82□□□□□ -1
SPAST-201ENST00000315285 DSPP15924 2871 aaKnown RBP8.82□□□□□ -1
SPAST-201ENST00000315285 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
SPAST-201ENST00000315285 APLNQ9ULZ1 77 aa8.81□□□□□ -1
SPAST-201ENST00000315285 ANAPC11Q9NYG5 84 aa8.81□□□□□ -1
SPAST-201ENST00000315285 LINC00336Q6ZUF6 198 aa8.81□□□□□ -1
SPAST-201ENST00000315285 CR1P17927 2039 aa8.81□□□□□ -1
SPAST-201ENST00000315285 SPRR4Q96PI1 79 aa8.79□□□□□ -1
SPAST-201ENST00000315285 CDH23Q9H251 3354 aa8.79□□□□□ -1
SPAST-201ENST00000315285 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
SPAST-201ENST00000315285 FRYQ5TBA9 3013 aa8.77□□□□□ -1.01
SPAST-201ENST00000315285 GCN1Q92616 2671 aaKnown RBP8.77□□□□□ -1.01
SPAST-201ENST00000315285 OCR1Q9BZK8 76 aa8.76□□□□□ -1.01
SPAST-201ENST00000315285 Q8NDZ9 215 aa8.75□□□□□ -1.01
SPAST-201ENST00000315285 IGLV7-43P04211 117 aa8.75□□□□□ -1.01
SPAST-201ENST00000315285 TEX15Q9BXT5 2789 aa8.74□□□□□ -1.01
SPAST-201ENST00000315285 WIPF1O43516 503 aa8.74□□□□□ -1.01
SPAST-201ENST00000315285 SPANXA2-OT1Q8N9U9 137 aa8.72□□□□□ -1.01
SPAST-201ENST00000315285 TEP1Q99973 2627 aaKnown RBP8.71□□□□□ -1.01
SPAST-201ENST00000315285 UQCR11O14957 56 aa8.71□□□□□ -1.01
SPAST-201ENST00000315285 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
SPAST-201ENST00000315285 UNC79Q9P2D8 2635 aa8.7□□□□□ -1.02
SPAST-201ENST00000315285 LAMA1P25391 3075 aa8.65□□□□□ -1.02
SPAST-201ENST00000315285 CELSR3Q9NYQ7 3312 aa8.65□□□□□ -1.02
SPAST-201ENST00000315285 IGSF10Q6WRI0 2623 aa8.64□□□□□ -1.03
SPAST-201ENST00000315285 NOTCH1P46531 2555 aa8.64□□□□□ -1.03
SPAST-201ENST00000315285 SPRR1AP35321 89 aa8.63□□□□□ -1.03
SPAST-201ENST00000315285 MIR22HGQ0VDD5 57 aa8.63□□□□□ -1.03
SPAST-201ENST00000315285 NBEAL2Q6ZNJ1 2754 aa8.62□□□□□ -1.03
SPAST-201ENST00000315285 STAB1Q9NY15 2570 aa8.62□□□□□ -1.03
SPAST-201ENST00000315285 C9orf92A6NGG3 77 aa8.62□□□□□ -1.03
SPAST-201ENST00000315285 COL6A5A8TX70 2615 aa8.62□□□□□ -1.03
SPAST-201ENST00000315285 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms