RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 C7orf33Q8WU49 177 aa16.53■□□□□ 0.24
HOXB3-201ENST00000311626 PDE6GP18545 87 aa16.52■□□□□ 0.23
HOXB3-201ENST00000311626 H3BQ85 93 aa16.49■□□□□ 0.23
HOXB3-201ENST00000311626 MRAPQ8TCY5 172 aa16.49■□□□□ 0.23
HOXB3-201ENST00000311626 Q8N9L7 120 aa16.48■□□□□ 0.23
HOXB3-201ENST00000311626 LINC00588Q9Y4M8 146 aa16.48■□□□□ 0.23
HOXB3-201ENST00000311626 BAHCC1Q9P281 2608 aa16.46■□□□□ 0.23
HOXB3-201ENST00000311626 NBEAL1Q6ZS30 2694 aa16.46■□□□□ 0.22
HOXB3-201ENST00000311626 DNAH10OSP0CZ25 163 aa16.45■□□□□ 0.22
HOXB3-201ENST00000311626 C3orf84H3BNL1 204 aa16.44■□□□□ 0.22
HOXB3-201ENST00000311626 J3KT08 172 aa16.44■□□□□ 0.22
HOXB3-201ENST00000311626 TMEM258P61165 79 aa16.43■□□□□ 0.22
HOXB3-201ENST00000311626 DPH3Q96FX2 82 aa16.43■□□□□ 0.22
HOXB3-201ENST00000311626 KCNQ1DNQ9H478 68 aa16.43■□□□□ 0.22
HOXB3-201ENST00000311626 DNAH3Q8TD57 4116 aa16.43■□□□□ 0.22
HOXB3-201ENST00000311626 COL6A5A8TX70 2615 aa16.43■□□□□ 0.22
HOXB3-201ENST00000311626 CXCL6P80162 114 aa16.42■□□□□ 0.22
HOXB3-201ENST00000311626 Q8N377 158 aa16.42■□□□□ 0.22
HOXB3-201ENST00000311626 SNURFQ9Y675 71 aa16.4■□□□□ 0.22
HOXB3-201ENST00000311626 OXTP01178 125 aa16.39■□□□□ 0.21
HOXB3-201ENST00000311626 FAM19A5Q7Z5A7 132 aaPredicted RBP16.38■□□□□ 0.21
HOXB3-201ENST00000311626 KRTAP7-1Q8IUC3 87 aa16.38■□□□□ 0.21
HOXB3-201ENST00000311626 ST20-AS1Q8NBB2 130 aa16.38■□□□□ 0.21
HOXB3-201ENST00000311626 Q9BRP9 147 aa16.37■□□□□ 0.21
HOXB3-201ENST00000311626 TRAV7A0A075B6U4 112 aa16.36■□□□□ 0.21
HOXB3-201ENST00000311626 TM2D3Q9BRN9 247 aa16.36■□□□□ 0.21
HOXB3-201ENST00000311626 BPY2O14599 106 aa16.33■□□□□ 0.21
HOXB3-201ENST00000311626 NREPQ16612 68 aa16.32■□□□□ 0.2
HOXB3-201ENST00000311626 RMI2Q96E14 147 aa16.32■□□□□ 0.2
HOXB3-201ENST00000311626 DNAH1Q9P2D7 4330 aa16.32■□□□□ 0.2
HOXB3-201ENST00000311626 F8WDY8 70 aa16.32■□□□□ 0.2
HOXB3-201ENST00000311626 LYSTQ99698 3801 aa16.32■□□□□ 0.2
HOXB3-201ENST00000311626 HUWE1Q7Z6Z7 4374 aaKnown RBP16.31■□□□□ 0.2
HOXB3-201ENST00000311626 IGLV1-50A0A075B6I6 118 aa16.31■□□□□ 0.2
HOXB3-201ENST00000311626 Q6ZRX8 168 aa16.31■□□□□ 0.2
HOXB3-201ENST00000311626 ETDCA0A1B0GVM5 59 aa16.3■□□□□ 0.2
HOXB3-201ENST00000311626 ERC2-IT1O76042 136 aa16.3■□□□□ 0.2
HOXB3-201ENST00000311626 TLX1NBP0CAT3 122 aa16.29■□□□□ 0.2
HOXB3-201ENST00000311626 DNAH10Q8IVF4 4471 aa16.28■□□□□ 0.2
HOXB3-201ENST00000311626 RPS28P62857 69 aaKnown RBP16.28■□□□□ 0.2
HOXB3-201ENST00000311626 KRTAP4-16G5E9R7 235 aaPredicted RBP16.27■□□□□ 0.2
HOXB3-201ENST00000311626 H7BZZ5 65 aa16.25■□□□□ 0.19
HOXB3-201ENST00000311626 IGKV4-1P06312 121 aa16.25■□□□□ 0.19
HOXB3-201ENST00000311626 K7EIL1 84 aa16.23■□□□□ 0.19
HOXB3-201ENST00000311626 C5orf47Q569G3 176 aa16.23■□□□□ 0.19
HOXB3-201ENST00000311626 DHRS4-AS1Q9P1J3 65 aa16.23■□□□□ 0.19
HOXB3-201ENST00000311626 A0A0G2JQZ4 141 aa16.22■□□□□ 0.19
HOXB3-201ENST00000311626 A0A1W2PNM2 257 aa16.22■□□□□ 0.19
HOXB3-201ENST00000311626 A0A1W2PNN7 141 aa16.22■□□□□ 0.19
HOXB3-201ENST00000311626 MRPL55Q7Z7F7 128 aaKnown RBP16.22■□□□□ 0.19
HOXB3-201ENST00000311626 PLA2G2DQ9UNK4 145 aa16.22■□□□□ 0.19
HOXB3-201ENST00000311626 BCE1O60756 84 aa16.22■□□□□ 0.19
HOXB3-201ENST00000311626 UBE2BP63146 152 aa16.22■□□□□ 0.19
HOXB3-201ENST00000311626 MGAM2Q2M2H8 2515 aa16.21■□□□□ 0.19
HOXB3-201ENST00000311626 IGLV5-48A0A075B6I7 105 aa16.21■□□□□ 0.19
HOXB3-201ENST00000311626 PRYO14603 147 aa16.21■□□□□ 0.19
HOXB3-201ENST00000311626 FAM236DA0A1B0GTK5 79 aa16.19■□□□□ 0.18
HOXB3-201ENST00000311626 FAM236CP0DP71 79 aa16.19■□□□□ 0.18
HOXB3-201ENST00000311626 SPRR1AP35321 89 aa16.19■□□□□ 0.18
HOXB3-201ENST00000311626 IGKV2-24A0A0C4DH68 120 aa16.18■□□□□ 0.18
HOXB3-201ENST00000311626 C1orf137Q5JT78 98 aa16.18■□□□□ 0.18
HOXB3-201ENST00000311626 F8WEM9 126 aa16.18■□□□□ 0.18
HOXB3-201ENST00000311626 CSMD3Q7Z407 3707 aa16.17■□□□□ 0.18
HOXB3-201ENST00000311626 IGLV5-37A0A075B6J1 123 aa16.17■□□□□ 0.18
HOXB3-201ENST00000311626 KRTAP1-5Q9BYS1 174 aa16.16■□□□□ 0.18
HOXB3-201ENST00000311626 KLKP1Q107X0 134 aa16.16■□□□□ 0.18
HOXB3-201ENST00000311626 STAB2Q8WWQ8 2551 aa16.15■□□□□ 0.18
HOXB3-201ENST00000311626 FUSP35637 526 aaKnown RBP eCLIP16.14■□□□□ 0.17
HOXB3-201ENST00000311626 COL7A1Q02388 2944 aa16.13■□□□□ 0.17
HOXB3-201ENST00000311626 TNP2Q05952 138 aa16.12■□□□□ 0.17
HOXB3-201ENST00000311626 REG3GQ6UW15 175 aa16.11■□□□□ 0.17
HOXB3-201ENST00000311626 A0A096LNI7 61 aa16.1■□□□□ 0.17
HOXB3-201ENST00000311626 DNAH9Q9NYC9 4486 aa16.1■□□□□ 0.17
HOXB3-201ENST00000311626 TENM2Q9NT68 2774 aa16.09■□□□□ 0.17
HOXB3-201ENST00000311626 PRLHP81277 87 aa16.09■□□□□ 0.17
HOXB3-201ENST00000311626 C4orf26Q17RF5 130 aa16.09■□□□□ 0.17
HOXB3-201ENST00000311626 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.09■□□□□ 0.17
HOXB3-201ENST00000311626 SRRM2Q9UQ35 2752 aaKnown RBP16.07■□□□□ 0.16
HOXB3-201ENST00000311626 Q8NBF4 154 aa16.06■□□□□ 0.16
HOXB3-201ENST00000311626 TMEM254Q8TBM7 123 aa16.06■□□□□ 0.16
HOXB3-201ENST00000311626 SMIM29Q86T20 159 aa16.04■□□□□ 0.16
HOXB3-201ENST00000311626 FAM30AQ9NZY2 134 aa16.04■□□□□ 0.16
HOXB3-201ENST00000311626 OCR1Q9BZK8 76 aa16.04■□□□□ 0.16
HOXB3-201ENST00000311626 Q5XG85 94 aa16.03■□□□□ 0.16
HOXB3-201ENST00000311626 PSCAO43653 123 aa16.02■□□□□ 0.16
HOXB3-201ENST00000311626 CHTF8P0CG12 524 aa16.01■□□□□ 0.15
HOXB3-201ENST00000311626 DEFB116Q30KQ4 102 aa16.01■□□□□ 0.15
HOXB3-201ENST00000311626 LINC00476Q8WZB0 136 aa16.01■□□□□ 0.15
HOXB3-201ENST00000311626 HIGD2AQ9BW72 106 aa16■□□□□ 0.15
HOXB3-201ENST00000311626 HRCT1Q6UXD1 115 aa15.98■□□□□ 0.15
HOXB3-201ENST00000311626 KRTAP11-1Q8IUC1 163 aa15.98■□□□□ 0.15
HOXB3-201ENST00000311626 DNAH7Q8WXX0 4024 aa15.97■□□□□ 0.15
HOXB3-201ENST00000311626 DSCR10P59022 87 aa15.97■□□□□ 0.15
HOXB3-201ENST00000311626 K7EQZ3 153 aa15.96■□□□□ 0.15
HOXB3-201ENST00000311626 UBE2DNLQ8IWF7 75 aa15.96■□□□□ 0.15
HOXB3-201ENST00000311626 SPRR4Q96PI1 79 aa15.96■□□□□ 0.15
HOXB3-201ENST00000311626 SERP1Q9Y6X1 66 aa15.96■□□□□ 0.15
HOXB3-201ENST00000311626 C16orf90A8MZG2 172 aa15.94■□□□□ 0.14
HOXB3-201ENST00000311626 EPM2AB3EWF7 344 aa15.94■□□□□ 0.14
HOXB3-201ENST00000311626 IGFL1Q6UW32 110 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms