RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SDIM1Q6ZPB5 146 aa4.44□□□□□ -1.7
PTCD2-201ENST00000308077 TMEM126AQ9H061 195 aa4.44□□□□□ -1.7
PTCD2-201ENST00000308077 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
PTCD2-201ENST00000308077 IGLV5-37A0A075B6J1 123 aa4.43□□□□□ -1.7
PTCD2-201ENST00000308077 M0R378 163 aa4.43□□□□□ -1.7
PTCD2-201ENST00000308077 S100A7L2Q5SY68 101 aa4.43□□□□□ -1.7
PTCD2-201ENST00000308077 FAT2Q9NYQ8 4349 aa4.43□□□□□ -1.7
PTCD2-201ENST00000308077 PANO1I0J062 215 aa4.43□□□□□ -1.7
PTCD2-201ENST00000308077 LYRM7Q5U5X0 104 aa4.43□□□□□ -1.7
PTCD2-201ENST00000308077 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
PTCD2-201ENST00000308077 C7orf33Q8WU49 177 aa4.43□□□□□ -1.7
PTCD2-201ENST00000308077 FAM218AQ96MZ4 157 aa4.43□□□□□ -1.7
PTCD2-201ENST00000308077 A0A1W2PNN7 141 aa4.42□□□□□ -1.7
PTCD2-201ENST00000308077 COX6CP09669 75 aa4.42□□□□□ -1.7
PTCD2-201ENST00000308077 NKAPP1Q8N9T2 125 aa4.42□□□□□ -1.7
PTCD2-201ENST00000308077 DNAH5Q8TE73 4624 aa4.42□□□□□ -1.7
PTCD2-201ENST00000308077 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
PTCD2-201ENST00000308077 TRBV20-1A0A075B6N2 111 aa4.41□□□□□ -1.7
PTCD2-201ENST00000308077 ETDBQ3ZM63 59 aa4.41□□□□□ -1.7
PTCD2-201ENST00000308077 C22orf24Q9Y442 160 aa4.41□□□□□ -1.7
PTCD2-201ENST00000308077 TRAV23DV6A0A075B6W5 121 aa4.41□□□□□ -1.7
PTCD2-201ENST00000308077 C9JAW5 83 aa4.41□□□□□ -1.7
PTCD2-201ENST00000308077 LST1O00453 97 aa4.41□□□□□ -1.7
PTCD2-201ENST00000308077 KRTAP10-2P60368 255 aa4.41□□□□□ -1.7
PTCD2-201ENST00000308077 OCIAD2Q56VL3 154 aa4.41□□□□□ -1.7
PTCD2-201ENST00000308077 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
PTCD2-201ENST00000308077 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.7
PTCD2-201ENST00000308077 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.7
PTCD2-201ENST00000308077 F8W1H4 67 aa4.4□□□□□ -1.7
PTCD2-201ENST00000308077 ATXN8Q156A1 80 aa4.4□□□□□ -1.7
PTCD2-201ENST00000308077 C6orf99Q4VX62 202 aa4.4□□□□□ -1.7
PTCD2-201ENST00000308077 LINC00167Q96N53 147 aa4.4□□□□□ -1.7
PTCD2-201ENST00000308077 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.7
PTCD2-201ENST00000308077 PKD1P98161 4303 aa4.4□□□□□ -1.7
PTCD2-201ENST00000308077 A0A087WYN8 130 aa4.4□□□□□ -1.71
PTCD2-201ENST00000308077 XP32Q5T750 250 aa4.4□□□□□ -1.71
PTCD2-201ENST00000308077 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.71
PTCD2-201ENST00000308077 SPACA4Q8TDM5 124 aa4.4□□□□□ -1.71
PTCD2-201ENST00000308077 PKIGQ9Y2B9 76 aa4.4□□□□□ -1.71
PTCD2-201ENST00000308077 IGLV1-50A0A075B6I6 118 aa4.39□□□□□ -1.71
PTCD2-201ENST00000308077 RPL37AP8A6NKH3 93 aa4.39□□□□□ -1.71
PTCD2-201ENST00000308077 M0QXV9 152 aa4.39□□□□□ -1.71
PTCD2-201ENST00000308077 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
PTCD2-201ENST00000308077 H0YGX0 51 aa4.38□□□□□ -1.71
PTCD2-201ENST00000308077 SLC25A20O43772 301 aa4.38□□□□□ -1.71
PTCD2-201ENST00000308077 KCNQ1DNQ9H478 68 aa4.38□□□□□ -1.71
PTCD2-201ENST00000308077 PHF5AQ7RTV0 110 aaKnown RBP4.38□□□□□ -1.71
PTCD2-201ENST00000308077 ANKRD29Q8N6D5 301 aa4.38□□□□□ -1.71
PTCD2-201ENST00000308077 DIRC1Q969H9 104 aa4.38□□□□□ -1.71
PTCD2-201ENST00000308077 LINC00474Q9P2X8 69 aa4.38□□□□□ -1.71
PTCD2-201ENST00000308077 DNAH8Q96JB1 4490 aa4.38□□□□□ -1.71
PTCD2-201ENST00000308077 KRTAP11-1Q8IUC1 163 aa4.37□□□□□ -1.71
PTCD2-201ENST00000308077 EPM2AB3EWF7 344 aa4.37□□□□□ -1.71
PTCD2-201ENST00000308077 PRYO14603 147 aa4.37□□□□□ -1.71
PTCD2-201ENST00000308077 TRACP01848 142 aa4.37□□□□□ -1.71
PTCD2-201ENST00000308077 KRTAP4-16G5E9R7 235 aaPredicted RBP4.36□□□□□ -1.71
PTCD2-201ENST00000308077 SPRR1AP35321 89 aa4.36□□□□□ -1.71
PTCD2-201ENST00000308077 ELOF1P60002 83 aaKnown RBP4.36□□□□□ -1.71
PTCD2-201ENST00000308077 LINC00575Q6W349 94 aa4.36□□□□□ -1.71
PTCD2-201ENST00000308077 TRBV7-6A0A0J9YX20 115 aa4.36□□□□□ -1.71
PTCD2-201ENST00000308077 COX7BP24311 80 aa4.36□□□□□ -1.71
PTCD2-201ENST00000308077 Q8N1X5 172 aa4.36□□□□□ -1.71
PTCD2-201ENST00000308077 LINC01600Q96MT4 127 aa4.36□□□□□ -1.71
PTCD2-201ENST00000308077 CBY1Q9Y3M2 126 aa4.36□□□□□ -1.71
PTCD2-201ENST00000308077 TEN1Q86WV5 123 aa4.35□□□□□ -1.71
PTCD2-201ENST00000308077 DPH3Q96FX2 82 aa4.35□□□□□ -1.71
PTCD2-201ENST00000308077 FAM30AQ9NZY2 134 aa4.35□□□□□ -1.71
PTCD2-201ENST00000308077 A0A1B0GX51 115 aa4.34□□□□□ -1.71
PTCD2-201ENST00000308077 KRTAP10-1P60331 282 aa4.34□□□□□ -1.71
PTCD2-201ENST00000308077 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
PTCD2-201ENST00000308077 LINC00336Q6ZUF6 198 aa4.34□□□□□ -1.71
PTCD2-201ENST00000308077 PLAC8Q9NZF1 115 aa4.34□□□□□ -1.71
PTCD2-201ENST00000308077 FLG2Q5D862 2391 aaPredicted RBP4.34□□□□□ -1.71
PTCD2-201ENST00000308077 TEX49A0A1B0GTD5 131 aa4.34□□□□□ -1.72
PTCD2-201ENST00000308077 B5MCH6 92 aa4.34□□□□□ -1.72
PTCD2-201ENST00000308077 UBE2BP63146 152 aa4.34□□□□□ -1.72
PTCD2-201ENST00000308077 A0A1B0GVY2 172 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 hADV29S1A0JD25 119 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 H3BT86 120 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 DNAL4O96015 105 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 Q6ZRX8 168 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 Q9BRP9 147 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 ETDCA0A1B0GVM5 59 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 K7ERU9 68 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 BAALC-AS2P0C853 105 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 Q6ZSA8 131 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 PPDPFLQ8WWR9 84 aa4.33□□□□□ -1.72
PTCD2-201ENST00000308077 Q6ZQY7 126 aa4.31□□□□□ -1.72
PTCD2-201ENST00000308077 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
PTCD2-201ENST00000308077 HAMPP81172 84 aa4.31□□□□□ -1.72
PTCD2-201ENST00000308077 PRLHP81277 87 aa4.31□□□□□ -1.72
PTCD2-201ENST00000308077 FAM19A1Q7Z5A9 133 aa4.31□□□□□ -1.72
PTCD2-201ENST00000308077 CIRBP-AS1Q8TBR5 109 aa4.31□□□□□ -1.72
PTCD2-201ENST00000308077 ORMDL1Q9P0S3 153 aa4.31□□□□□ -1.72
PTCD2-201ENST00000308077 ERC2-IT1O76042 136 aa4.3□□□□□ -1.72
PTCD2-201ENST00000308077 INAFM2P0DMQ5 153 aa4.3□□□□□ -1.72
PTCD2-201ENST00000308077 SCXQ7RTU7 201 aa4.3□□□□□ -1.72
PTCD2-201ENST00000308077 SMCR5Q8TEV8 140 aa4.3□□□□□ -1.72
PTCD2-201ENST00000308077 LRP1BQ9NZR2 4599 aa4.3□□□□□ -1.72
PTCD2-201ENST00000308077 SNCGO76070 127 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms