RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 LAMTOR3Q9UHA4 124 aa10.59□□□□□ -0.71
TVP23B-201ENST00000307767 PRKDCP78527 4128 aaKnown RBP10.59□□□□□ -0.71
TVP23B-201ENST00000307767 IGLV1-50A0A075B6I6 118 aa10.58□□□□□ -0.72
TVP23B-201ENST00000307767 Q6JHZ5 121 aa10.58□□□□□ -0.72
TVP23B-201ENST00000307767 RPL37AP8A6NKH3 93 aa10.57□□□□□ -0.72
TVP23B-201ENST00000307767 H3BQ85 93 aa10.57□□□□□ -0.72
TVP23B-201ENST00000307767 SPRR1AP35321 89 aa10.57□□□□□ -0.72
TVP23B-201ENST00000307767 DNHD1Q96M86 4753 aa10.57□□□□□ -0.72
TVP23B-201ENST00000307767 STARD9Q9P2P6 4700 aa10.56□□□□□ -0.72
TVP23B-201ENST00000307767 IGKV3D-7A0A0C4DH55 119 aa10.56□□□□□ -0.72
TVP23B-201ENST00000307767 LOC107984640A0A0U1RRK4 108 aa10.56□□□□□ -0.72
TVP23B-201ENST00000307767 TRBV7-4A0A0J9YYF1 115 aa10.55□□□□□ -0.72
TVP23B-201ENST00000307767 FAM236AA0A1B0GUQ0 79 aa10.55□□□□□ -0.72
TVP23B-201ENST00000307767 FAM236BA0A1B0GV22 79 aa10.55□□□□□ -0.72
TVP23B-201ENST00000307767 TENM2Q9NT68 2774 aa10.54□□□□□ -0.72
TVP23B-201ENST00000307767 CNBPP62633 177 aaKnown RBP10.54□□□□□ -0.72
TVP23B-201ENST00000307767 B5MCH6 92 aa10.53□□□□□ -0.72
TVP23B-201ENST00000307767 LINC01547P58512 204 aaPredicted RBP10.53□□□□□ -0.72
TVP23B-201ENST00000307767 UBE2DNLQ8IWF7 75 aa10.53□□□□□ -0.72
TVP23B-201ENST00000307767 Q9BRP9 147 aa10.53□□□□□ -0.72
TVP23B-201ENST00000307767 FAM19A5Q7Z5A7 132 aaPredicted RBP10.53□□□□□ -0.72
TVP23B-201ENST00000307767 VPS13DQ5THJ4 4388 aa10.52□□□□□ -0.72
TVP23B-201ENST00000307767 PRYO14603 147 aa10.52□□□□□ -0.73
TVP23B-201ENST00000307767 HIST1H4AP62805 103 aaKnown RBP10.52□□□□□ -0.73
TVP23B-201ENST00000307767 A0A096LNI7 61 aa10.51□□□□□ -0.73
TVP23B-201ENST00000307767 MRPL55Q7Z7F7 128 aaKnown RBP10.51□□□□□ -0.73
TVP23B-201ENST00000307767 CCDC179H3BU77 68 aa10.51□□□□□ -0.73
TVP23B-201ENST00000307767 Q6ZRX8 168 aa10.51□□□□□ -0.73
TVP23B-201ENST00000307767 Q8N377 158 aa10.5□□□□□ -0.73
TVP23B-201ENST00000307767 DSCR8Q96T75 97 aa10.5□□□□□ -0.73
TVP23B-201ENST00000307767 A0A1W2PNN7 141 aa10.49□□□□□ -0.73
TVP23B-201ENST00000307767 LRCOL1A6NCL2 159 aa10.48□□□□□ -0.73
TVP23B-201ENST00000307767 A0A087WVE0 104 aa10.48□□□□□ -0.73
TVP23B-201ENST00000307767 C16orf90A8MZG2 172 aa10.48□□□□□ -0.73
TVP23B-201ENST00000307767 PDE6GP18545 87 aa10.48□□□□□ -0.73
TVP23B-201ENST00000307767 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
TVP23B-201ENST00000307767 PSCAO43653 123 aa10.47□□□□□ -0.73
TVP23B-201ENST00000307767 GHRHP01286 108 aa10.47□□□□□ -0.73
TVP23B-201ENST00000307767 NBDYA0A0U1RRE5 68 aa10.46□□□□□ -0.73
TVP23B-201ENST00000307767 NUPR2A6NF83 97 aa10.46□□□□□ -0.73
TVP23B-201ENST00000307767 ERC2-IT1O76042 136 aa10.46□□□□□ -0.74
TVP23B-201ENST00000307767 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.45□□□□□ -0.74
TVP23B-201ENST00000307767 DHRS4-AS1Q9P1J3 65 aa10.45□□□□□ -0.74
TVP23B-201ENST00000307767 MEGF8Q7Z7M0 2845 aa10.44□□□□□ -0.74
TVP23B-201ENST00000307767 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
TVP23B-201ENST00000307767 UBL5Q9BZL1 73 aa10.44□□□□□ -0.74
TVP23B-201ENST00000307767 IGKV2-24A0A0C4DH68 120 aa10.43□□□□□ -0.74
TVP23B-201ENST00000307767 ETDCA0A1B0GVM5 59 aa10.43□□□□□ -0.74
TVP23B-201ENST00000307767 Q6ZVQ6 151 aa10.43□□□□□ -0.74
TVP23B-201ENST00000307767 DEFB105AQ8NG35 78 aa10.43□□□□□ -0.74
TVP23B-201ENST00000307767 ATP5EP2Q5VTU8 51 aa10.43□□□□□ -0.74
TVP23B-201ENST00000307767 IGLV5-48A0A075B6I7 105 aa10.42□□□□□ -0.74
TVP23B-201ENST00000307767 KRTAP21-3Q3LHN1 58 aa10.42□□□□□ -0.74
TVP23B-201ENST00000307767 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
TVP23B-201ENST00000307767 CHTF8P0CG12 524 aa10.42□□□□□ -0.74
TVP23B-201ENST00000307767 KRTAP11-1Q8IUC1 163 aa10.42□□□□□ -0.74
TVP23B-201ENST00000307767 C3orf22Q8N5N4 141 aa10.42□□□□□ -0.74
TVP23B-201ENST00000307767 TNP2Q05952 138 aa10.41□□□□□ -0.74
TVP23B-201ENST00000307767 REG3GQ6UW15 175 aa10.41□□□□□ -0.74
TVP23B-201ENST00000307767 C14orf177Q52M58 125 aa10.4□□□□□ -0.75
TVP23B-201ENST00000307767 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.75
TVP23B-201ENST00000307767 PANO1I0J062 215 aa10.36□□□□□ -0.75
TVP23B-201ENST00000307767 SMIM29Q86T20 159 aa10.35□□□□□ -0.75
TVP23B-201ENST00000307767 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
TVP23B-201ENST00000307767 UBE2BP63146 152 aa10.34□□□□□ -0.75
TVP23B-201ENST00000307767 KMT2AQ03164 3969 aa10.34□□□□□ -0.75
TVP23B-201ENST00000307767 DNAH2Q9P225 4427 aa10.34□□□□□ -0.75
TVP23B-201ENST00000307767 ATOX1O00244 68 aa10.34□□□□□ -0.75
TVP23B-201ENST00000307767 HAMPP81172 84 aa10.34□□□□□ -0.75
TVP23B-201ENST00000307767 PRLHP81277 87 aa10.33□□□□□ -0.76
TVP23B-201ENST00000307767 A0A1W2PNM2 257 aa10.32□□□□□ -0.76
TVP23B-201ENST00000307767 CXCL6P80162 114 aa10.32□□□□□ -0.76
TVP23B-201ENST00000307767 COX7CP15954 63 aa10.31□□□□□ -0.76
TVP23B-201ENST00000307767 DNAH17Q9UFH2 4485 aa10.29□□□□□ -0.76
TVP23B-201ENST00000307767 UQCRQO14949 82 aa10.29□□□□□ -0.76
TVP23B-201ENST00000307767 Q6ZR54 194 aa10.29□□□□□ -0.76
TVP23B-201ENST00000307767 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
TVP23B-201ENST00000307767 HECTD4Q9Y4D8 3996 aa10.28□□□□□ -0.76
TVP23B-201ENST00000307767 EPM2AB3EWF7 344 aa10.27□□□□□ -0.76
TVP23B-201ENST00000307767 C1orf137Q5JT78 98 aa10.27□□□□□ -0.76
TVP23B-201ENST00000307767 A0A087WTM6 91 aa10.27□□□□□ -0.77
TVP23B-201ENST00000307767 C3orf84H3BNL1 204 aa10.27□□□□□ -0.77
TVP23B-201ENST00000307767 FUSP35637 526 aaKnown RBP eCLIP10.26□□□□□ -0.77
TVP23B-201ENST00000307767 SERP2Q8N6R1 65 aa10.26□□□□□ -0.77
TVP23B-201ENST00000307767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
TVP23B-201ENST00000307767 Q8NBF4 154 aa10.25□□□□□ -0.77
TVP23B-201ENST00000307767 SS18L2Q9UHA2 77 aa10.25□□□□□ -0.77
TVP23B-201ENST00000307767 SPRR4Q96PI1 79 aa10.24□□□□□ -0.77
TVP23B-201ENST00000307767 CYSTM1Q9H1C7 97 aa10.24□□□□□ -0.77
TVP23B-201ENST00000307767 FBN3Q75N90 2809 aa10.23□□□□□ -0.77
TVP23B-201ENST00000307767 A0A0G2JQZ4 141 aa10.23□□□□□ -0.77
TVP23B-201ENST00000307767 H0Y9J4 135 aa10.23□□□□□ -0.77
TVP23B-201ENST00000307767 HIGD2AQ9BW72 106 aa10.23□□□□□ -0.77
TVP23B-201ENST00000307767 C9orf153Q5TBE3 101 aa10.22□□□□□ -0.77
TVP23B-201ENST00000307767 SPACA4Q8TDM5 124 aa10.22□□□□□ -0.77
TVP23B-201ENST00000307767 CRYGAP11844 174 aa10.22□□□□□ -0.77
TVP23B-201ENST00000307767 NREPQ16612 68 aa10.22□□□□□ -0.77
TVP23B-201ENST00000307767 LINC00476Q8WZB0 136 aa10.22□□□□□ -0.77
TVP23B-201ENST00000307767 LINC00474Q9P2X8 69 aa10.22□□□□□ -0.77
TVP23B-201ENST00000307767 KRTAP13-1Q8IUC0 172 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms