RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 M0R378 163 aa9.95□□□□□ -0.82
CSDC2-201ENST00000306149 COL6A5A8TX70 2615 aa9.95□□□□□ -0.82
CSDC2-201ENST00000306149 BAHCC1Q9P281 2608 aa9.94□□□□□ -0.82
CSDC2-201ENST00000306149 Q5XG85 94 aa9.94□□□□□ -0.82
CSDC2-201ENST00000306149 SCXQ7RTU7 201 aa9.93□□□□□ -0.82
CSDC2-201ENST00000306149 C20orf197Q8N268 126 aa9.93□□□□□ -0.82
CSDC2-201ENST00000306149 C11orf45Q8TAV5 145 aa9.93□□□□□ -0.82
CSDC2-201ENST00000306149 KRTAP24-1Q3LI83 254 aa9.92□□□□□ -0.82
CSDC2-201ENST00000306149 LINC00528Q8N1L1 170 aa9.92□□□□□ -0.82
CSDC2-201ENST00000306149 PRB2P02812 416 aaPredicted RBP9.92□□□□□ -0.82
CSDC2-201ENST00000306149 SYCNQ0VAF6 134 aa9.92□□□□□ -0.82
CSDC2-201ENST00000306149 LINC01556Q5JQF7 62 aa9.91□□□□□ -0.82
CSDC2-201ENST00000306149 SERTAD4-AS1Q5TG53 156 aa9.9□□□□□ -0.82
CSDC2-201ENST00000306149 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
CSDC2-201ENST00000306149 DEFB105AQ8NG35 78 aa9.89□□□□□ -0.83
CSDC2-201ENST00000306149 CASC10Q5T4H9 136 aa9.88□□□□□ -0.83
CSDC2-201ENST00000306149 KLKP1Q107X0 134 aa9.87□□□□□ -0.83
CSDC2-201ENST00000306149 MRAPQ8TCY5 172 aa9.87□□□□□ -0.83
CSDC2-201ENST00000306149 H7BZZ5 65 aa9.86□□□□□ -0.83
CSDC2-201ENST00000306149 NKAPP1Q8N9T2 125 aa9.86□□□□□ -0.83
CSDC2-201ENST00000306149 FAM236DA0A1B0GTK5 79 aa9.86□□□□□ -0.83
CSDC2-201ENST00000306149 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
CSDC2-201ENST00000306149 FAM236CP0DP71 79 aa9.86□□□□□ -0.83
CSDC2-201ENST00000306149 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
CSDC2-201ENST00000306149 FAM168BA1KXE4 195 aa9.86□□□□□ -0.83
CSDC2-201ENST00000306149 SEC61GP60059 68 aa9.86□□□□□ -0.83
CSDC2-201ENST00000306149 DNAH3Q8TD57 4116 aa9.83□□□□□ -0.84
CSDC2-201ENST00000306149 DNAH10OSP0CZ25 163 aa9.83□□□□□ -0.84
CSDC2-201ENST00000306149 LINC00588Q9Y4M8 146 aa9.83□□□□□ -0.84
CSDC2-201ENST00000306149 Q8N9L7 120 aa9.82□□□□□ -0.84
CSDC2-201ENST00000306149 MGAM2Q2M2H8 2515 aa9.82□□□□□ -0.84
CSDC2-201ENST00000306149 KCNQ1DNQ9H478 68 aa9.82□□□□□ -0.84
CSDC2-201ENST00000306149 C3orf84H3BNL1 204 aa9.8□□□□□ -0.84
CSDC2-201ENST00000306149 EPM2AB3EWF7 344 aa9.8□□□□□ -0.84
CSDC2-201ENST00000306149 Q8N377 158 aa9.8□□□□□ -0.84
CSDC2-201ENST00000306149 TM2D3Q9BRN9 247 aa9.8□□□□□ -0.84
CSDC2-201ENST00000306149 SNURFQ9Y675 71 aa9.79□□□□□ -0.84
CSDC2-201ENST00000306149 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
CSDC2-201ENST00000306149 LINC00336Q6ZUF6 198 aa9.78□□□□□ -0.84
CSDC2-201ENST00000306149 RMI2Q96E14 147 aa9.78□□□□□ -0.84
CSDC2-201ENST00000306149 LYSTQ99698 3801 aa9.78□□□□□ -0.84
CSDC2-201ENST00000306149 STAB2Q8WWQ8 2551 aa9.78□□□□□ -0.84
CSDC2-201ENST00000306149 IGKV4-1P06312 121 aa9.77□□□□□ -0.84
CSDC2-201ENST00000306149 KRTAP7-1Q8IUC3 87 aa9.77□□□□□ -0.84
CSDC2-201ENST00000306149 HUWE1Q7Z6Z7 4374 aaKnown RBP9.77□□□□□ -0.85
CSDC2-201ENST00000306149 DNAH1Q9P2D7 4330 aa9.77□□□□□ -0.85
CSDC2-201ENST00000306149 NREPQ16612 68 aa9.77□□□□□ -0.85
CSDC2-201ENST00000306149 BPY2O14599 106 aa9.76□□□□□ -0.85
CSDC2-201ENST00000306149 NDUFC1O43677 76 aa9.76□□□□□ -0.85
CSDC2-201ENST00000306149 TLX1NBP0CAT3 122 aa9.76□□□□□ -0.85
CSDC2-201ENST00000306149 Q9BRP9 147 aa9.76□□□□□ -0.85
CSDC2-201ENST00000306149 PLA2G2DQ9UNK4 145 aa9.76□□□□□ -0.85
CSDC2-201ENST00000306149 ST20-AS1Q8NBB2 130 aa9.76□□□□□ -0.85
CSDC2-201ENST00000306149 IGLV5-48A0A075B6I7 105 aa9.75□□□□□ -0.85
CSDC2-201ENST00000306149 ERC2-IT1O76042 136 aa9.75□□□□□ -0.85
CSDC2-201ENST00000306149 F8WEM9 126 aa9.75□□□□□ -0.85
CSDC2-201ENST00000306149 PKIGQ9Y2B9 76 aa9.75□□□□□ -0.85
CSDC2-201ENST00000306149 DNAH10Q8IVF4 4471 aa9.75□□□□□ -0.85
CSDC2-201ENST00000306149 Q6ZRX8 168 aa9.74□□□□□ -0.85
CSDC2-201ENST00000306149 DHRS4-AS1Q9P1J3 65 aa9.74□□□□□ -0.85
CSDC2-201ENST00000306149 PRO0628Q9UI54 55 aa9.74□□□□□ -0.85
CSDC2-201ENST00000306149 TENM2Q9NT68 2774 aa9.73□□□□□ -0.85
CSDC2-201ENST00000306149 IGLV1-50A0A075B6I6 118 aa9.73□□□□□ -0.85
CSDC2-201ENST00000306149 ETDCA0A1B0GVM5 59 aa9.73□□□□□ -0.85
CSDC2-201ENST00000306149 IGLV5-37A0A075B6J1 123 aa9.72□□□□□ -0.85
CSDC2-201ENST00000306149 PRYO14603 147 aa9.72□□□□□ -0.85
CSDC2-201ENST00000306149 CSMD3Q7Z407 3707 aa9.72□□□□□ -0.85
CSDC2-201ENST00000306149 A0A1B0GW54 56 aa9.72□□□□□ -0.85
CSDC2-201ENST00000306149 KRTAP4-16G5E9R7 235 aaPredicted RBP9.72□□□□□ -0.85
CSDC2-201ENST00000306149 ATP5EP56381 51 aaPredicted RBP9.71□□□□□ -0.86
CSDC2-201ENST00000306149 TMEM254Q8TBM7 123 aa9.71□□□□□ -0.86
CSDC2-201ENST00000306149 COL7A1Q02388 2944 aa9.71□□□□□ -0.86
CSDC2-201ENST00000306149 SPRR1AP35321 89 aa9.7□□□□□ -0.86
CSDC2-201ENST00000306149 OCR1Q9BZK8 76 aa9.69□□□□□ -0.86
CSDC2-201ENST00000306149 FUSP35637 526 aaKnown RBP eCLIP9.69□□□□□ -0.86
CSDC2-201ENST00000306149 TNP2Q05952 138 aa9.69□□□□□ -0.86
CSDC2-201ENST00000306149 MRPL55Q7Z7F7 128 aaKnown RBP9.69□□□□□ -0.86
CSDC2-201ENST00000306149 K7EIL1 84 aa9.68□□□□□ -0.86
CSDC2-201ENST00000306149 SRRM2Q9UQ35 2752 aaKnown RBP9.68□□□□□ -0.86
CSDC2-201ENST00000306149 A0A1W2PNM2 257 aa9.68□□□□□ -0.86
CSDC2-201ENST00000306149 UBE2BP63146 152 aa9.67□□□□□ -0.86
CSDC2-201ENST00000306149 A0A0G2JQZ4 141 aa9.66□□□□□ -0.86
CSDC2-201ENST00000306149 A0A1W2PNN7 141 aa9.66□□□□□ -0.86
CSDC2-201ENST00000306149 C1orf137Q5JT78 98 aa9.66□□□□□ -0.86
CSDC2-201ENST00000306149 IGKV2-24A0A0C4DH68 120 aa9.65□□□□□ -0.86
CSDC2-201ENST00000306149 A0A0U1RQV1 116 aa9.64□□□□□ -0.87
CSDC2-201ENST00000306149 KRTAP1-5Q9BYS1 174 aa9.64□□□□□ -0.87
CSDC2-201ENST00000306149 V9GYY9 64 aa9.64□□□□□ -0.87
CSDC2-201ENST00000306149 DNAH9Q9NYC9 4486 aa9.64□□□□□ -0.87
CSDC2-201ENST00000306149 Q8NBF4 154 aa9.63□□□□□ -0.87
CSDC2-201ENST00000306149 FP248Q71RG6 208 aaPredicted RBP9.63□□□□□ -0.87
CSDC2-201ENST00000306149 SMIM26A0A096LP01 95 aa9.62□□□□□ -0.87
CSDC2-201ENST00000306149 SPRR4Q96PI1 79 aa9.62□□□□□ -0.87
CSDC2-201ENST00000306149 LINC00474Q9P2X8 69 aa9.62□□□□□ -0.87
CSDC2-201ENST00000306149 REG3GQ6UW15 175 aa9.61□□□□□ -0.87
CSDC2-201ENST00000306149 A0A096LNI7 61 aa9.6□□□□□ -0.87
CSDC2-201ENST00000306149 PRLHP81277 87 aa9.59□□□□□ -0.87
CSDC2-201ENST00000306149 BRK1Q8WUW1 75 aa9.59□□□□□ -0.87
CSDC2-201ENST00000306149 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.59□□□□□ -0.87
CSDC2-201ENST00000306149 SMIM29Q86T20 159 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms