RNA–Protein interactions for RNA: ENST00000304527.8

SH3D19-201, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH3D19, Length 5,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-201ENST00000304527 Q6ZRP5 223 aa4.33□□□□□ -1.72
SH3D19-201ENST00000304527 LITAFQ99732 161 aa4.33□□□□□ -1.72
SH3D19-201ENST00000304527 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-201ENST00000304527 TEX49A0A1B0GTD5 131 aa4.33□□□□□ -1.72
SH3D19-201ENST00000304527 LCA10Q71F78 164 aa4.33□□□□□ -1.72
SH3D19-201ENST00000304527 KRTAP10-3P60369 221 aa4.33□□□□□ -1.72
SH3D19-201ENST00000304527 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
SH3D19-201ENST00000304527 Q6ZQY7 126 aa4.32□□□□□ -1.72
SH3D19-201ENST00000304527 C9orf116Q5BN46 136 aaPredicted RBP4.32□□□□□ -1.72
SH3D19-201ENST00000304527 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
SH3D19-201ENST00000304527 IGKV3D-7A0A0C4DH55 119 aa4.32□□□□□ -1.72
SH3D19-201ENST00000304527 ESRGQ1W209 222 aa4.32□□□□□ -1.72
SH3D19-201ENST00000304527 RPL37AP61513 92 aaKnown RBP4.32□□□□□ -1.72
SH3D19-201ENST00000304527 LINC00612Q8N6U2 182 aa4.32□□□□□ -1.72
SH3D19-201ENST00000304527 IGLV4-60A0A075B6I1 120 aa4.31□□□□□ -1.72
SH3D19-201ENST00000304527 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
SH3D19-201ENST00000304527 ITPR2Q14571 2701 aa4.31□□□□□ -1.72
SH3D19-201ENST00000304527 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
SH3D19-201ENST00000304527 A8MUN3 132 aa4.31□□□□□ -1.72
SH3D19-201ENST00000304527 K7EIL1 84 aa4.31□□□□□ -1.72
SH3D19-201ENST00000304527 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
SH3D19-201ENST00000304527 Q9BRP9 147 aa4.3□□□□□ -1.72
SH3D19-201ENST00000304527 SETXQ7Z333 2677 aaKnown RBP4.3□□□□□ -1.72
SH3D19-201ENST00000304527 CSMD1Q96PZ7 3565 aa4.3□□□□□ -1.72
SH3D19-201ENST00000304527 SMCPP49901 116 aaPredicted RBP4.3□□□□□ -1.72
SH3D19-201ENST00000304527 IGHV3OR16-9A0A0B4J2B5 98 aa4.3□□□□□ -1.72
SH3D19-201ENST00000304527 Q6ZRU5 148 aa4.3□□□□□ -1.72
SH3D19-201ENST00000304527 CELSR1Q9NYQ6 3014 aa4.29□□□□□ -1.72
SH3D19-201ENST00000304527 COX7CP15954 63 aa4.29□□□□□ -1.72
SH3D19-201ENST00000304527 CXCL6P80162 114 aa4.29□□□□□ -1.72
SH3D19-201ENST00000304527 Q8N9L7 120 aa4.29□□□□□ -1.72
SH3D19-201ENST00000304527 TRBV10-3A0A0K0K1G6 114 aa4.28□□□□□ -1.72
SH3D19-201ENST00000304527 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
SH3D19-201ENST00000304527 TYMSOSQ8TAI1 123 aa4.28□□□□□ -1.72
SH3D19-201ENST00000304527 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
SH3D19-201ENST00000304527 F8P00451 2351 aa4.28□□□□□ -1.72
SH3D19-201ENST00000304527 SLPIP03973 132 aa4.28□□□□□ -1.72
SH3D19-201ENST00000304527 C22orf24Q9Y442 160 aa4.27□□□□□ -1.73
SH3D19-201ENST00000304527 Q8NAQ8 132 aa4.27□□□□□ -1.73
SH3D19-201ENST00000304527 LINC00588Q9Y4M8 146 aa4.27□□□□□ -1.73
SH3D19-201ENST00000304527 SVEP1Q4LDE5 3571 aa4.27□□□□□ -1.73
SH3D19-201ENST00000304527 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
SH3D19-201ENST00000304527 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
SH3D19-201ENST00000304527 PRR3P79522 188 aaKnown RBP4.26□□□□□ -1.73
SH3D19-201ENST00000304527 SMIM11BQ8TCY0 68 aa4.26□□□□□ -1.73
SH3D19-201ENST00000304527 NF1P21359 2839 aa4.26□□□□□ -1.73
SH3D19-201ENST00000304527 IGHV6-1A0A0B4J1U7 121 aa4.26□□□□□ -1.73
SH3D19-201ENST00000304527 ATRQ13535 2644 aa4.26□□□□□ -1.73
SH3D19-201ENST00000304527 KMT2BQ9UMN6 2715 aaPredicted RBP4.26□□□□□ -1.73
SH3D19-201ENST00000304527 TENM4Q6N022 2769 aa4.25□□□□□ -1.73
SH3D19-201ENST00000304527 SMCR5Q8TEV8 140 aa4.25□□□□□ -1.73
SH3D19-201ENST00000304527 SPACA4Q8TDM5 124 aa4.25□□□□□ -1.73
SH3D19-201ENST00000304527 DNAH10OSP0CZ25 163 aa4.24□□□□□ -1.73
SH3D19-201ENST00000304527 PDZD2O15018 2839 aa4.24□□□□□ -1.73
SH3D19-201ENST00000304527 COX6B2Q6YFQ2 88 aa4.24□□□□□ -1.73
SH3D19-201ENST00000304527 OXTP01178 125 aa4.23□□□□□ -1.73
SH3D19-201ENST00000304527 KRTAP10-11P60412 298 aa4.23□□□□□ -1.73
SH3D19-201ENST00000304527 PRLHP81277 87 aa4.23□□□□□ -1.73
SH3D19-201ENST00000304527 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
SH3D19-201ENST00000304527 LINC01600Q96MT4 127 aa4.23□□□□□ -1.73
SH3D19-201ENST00000304527 TM2D3Q9BRN9 247 aa4.23□□□□□ -1.73
SH3D19-201ENST00000304527 NSD1Q96L73 2696 aaPredicted RBP4.23□□□□□ -1.73
SH3D19-201ENST00000304527 SNURFQ9Y675 71 aa4.23□□□□□ -1.73
SH3D19-201ENST00000304527 GCN1Q92616 2671 aaKnown RBP4.23□□□□□ -1.73
SH3D19-201ENST00000304527 Q8NBF4 154 aa4.23□□□□□ -1.73
SH3D19-201ENST00000304527 SPAG11AQ6PDA7 123 aa4.22□□□□□ -1.73
SH3D19-201ENST00000304527 TMEM254Q8TBM7 123 aa4.22□□□□□ -1.73
SH3D19-201ENST00000304527 ATP11AUNQ6ZP68 121 aa4.22□□□□□ -1.73
SH3D19-201ENST00000304527 SERP2Q8N6R1 65 aa4.22□□□□□ -1.73
SH3D19-201ENST00000304527 EPM2AB3EWF7 344 aa4.22□□□□□ -1.73
SH3D19-201ENST00000304527 FLNBO75369 2602 aaKnown RBP4.22□□□□□ -1.73
SH3D19-201ENST00000304527 C7orf65Q6ZTY9 151 aa4.22□□□□□ -1.73
SH3D19-201ENST00000304527 TRBV7-6A0A0J9YX20 115 aa4.21□□□□□ -1.74
SH3D19-201ENST00000304527 MOBPQ13875 183 aa4.21□□□□□ -1.74
SH3D19-201ENST00000304527 Q8N814 137 aa4.21□□□□□ -1.74
SH3D19-201ENST00000304527 CHTF8P0CG12 524 aa4.21□□□□□ -1.74
SH3D19-201ENST00000304527 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
SH3D19-201ENST00000304527 ENHOQ6UWT2 76 aa4.21□□□□□ -1.74
SH3D19-201ENST00000304527 LINC00167Q96N53 147 aa4.21□□□□□ -1.74
SH3D19-201ENST00000304527 A0A087WSZ3 146 aa4.2□□□□□ -1.74
SH3D19-201ENST00000304527 GVQW2A0A096LPI5 108 aaPredicted RBP4.2□□□□□ -1.74
SH3D19-201ENST00000304527 TEP1Q99973 2627 aaKnown RBP4.2□□□□□ -1.74
SH3D19-201ENST00000304527 BCE1O60756 84 aa4.2□□□□□ -1.74
SH3D19-201ENST00000304527 PHF5AQ7RTV0 110 aaKnown RBP4.19□□□□□ -1.74
SH3D19-201ENST00000304527 LINC00313P59037 77 aa4.19□□□□□ -1.74
SH3D19-201ENST00000304527 Q8N3U1 123 aa4.19□□□□□ -1.74
SH3D19-201ENST00000304527 PRR34Q9NV39 138 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 CSMD2Q7Z408 3487 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 A0A087WTM6 91 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 FAM218AQ96MZ4 157 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 A0A087WYN8 130 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 NDUFC1O43677 76 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 Q75L30 129 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 HIVEP1P15822 2718 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 hDV103S1A0JD37 113 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 VPS13CQ709C8 3753 aa4.18□□□□□ -1.74
SH3D19-201ENST00000304527 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
SH3D19-201ENST00000304527 LINC00476Q8WZB0 136 aa4.17□□□□□ -1.74
SH3D19-201ENST00000304527 LINC01547P58512 204 aaPredicted RBP4.17□□□□□ -1.74
SH3D19-201ENST00000304527 C6orf48Q9UBA6 75 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 318.1 ms