RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 FAM168BA1KXE4 195 aa9.37□□□□□ -0.91
SHCBP1-201ENST00000303383 C7orf33Q8WU49 177 aa9.37□□□□□ -0.91
SHCBP1-201ENST00000303383 PLA2G2DQ9UNK4 145 aa9.37□□□□□ -0.91
SHCBP1-201ENST00000303383 CSMD3Q7Z407 3707 aa9.37□□□□□ -0.91
SHCBP1-201ENST00000303383 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
SHCBP1-201ENST00000303383 FBN3Q75N90 2809 aa9.36□□□□□ -0.91
SHCBP1-201ENST00000303383 RPL37AP8A6NKH3 93 aa9.36□□□□□ -0.91
SHCBP1-201ENST00000303383 OXTP01178 125 aa9.36□□□□□ -0.91
SHCBP1-201ENST00000303383 LYSTQ99698 3801 aa9.35□□□□□ -0.91
SHCBP1-201ENST00000303383 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
SHCBP1-201ENST00000303383 C16orf90A8MZG2 172 aa9.35□□□□□ -0.91
SHCBP1-201ENST00000303383 INAFM2P0DMQ5 153 aa9.35□□□□□ -0.91
SHCBP1-201ENST00000303383 A0A096LNI7 61 aa9.34□□□□□ -0.91
SHCBP1-201ENST00000303383 TMEM256-PLSCR3K7ERE1 68 aa9.34□□□□□ -0.91
SHCBP1-201ENST00000303383 C3orf22Q8N5N4 141 aa9.34□□□□□ -0.91
SHCBP1-201ENST00000303383 MRPL55Q7Z7F7 128 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-201ENST00000303383 DPH3Q96FX2 82 aa9.34□□□□□ -0.91
SHCBP1-201ENST00000303383 DYNC2H1Q8NCM8 4307 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-201ENST00000303383 TGP01266 2768 aa9.33□□□□□ -0.92
SHCBP1-201ENST00000303383 LRCOL1A6NCL2 159 aa9.33□□□□□ -0.92
SHCBP1-201ENST00000303383 TRBV7-6A0A0J9YX20 115 aa9.33□□□□□ -0.92
SHCBP1-201ENST00000303383 ELOF1P60002 83 aaKnown RBP9.33□□□□□ -0.92
SHCBP1-201ENST00000303383 PLECQ15149 4684 aaKnown RBP9.33□□□□□ -0.92
SHCBP1-201ENST00000303383 Q6ZRN7 208 aaPredicted RBP9.33□□□□□ -0.92
SHCBP1-201ENST00000303383 Q6ZQY7 126 aa9.32□□□□□ -0.92
SHCBP1-201ENST00000303383 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
SHCBP1-201ENST00000303383 GHRHP01286 108 aa9.32□□□□□ -0.92
SHCBP1-201ENST00000303383 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
SHCBP1-201ENST00000303383 ETDCA0A1B0GVM5 59 aa9.31□□□□□ -0.92
SHCBP1-201ENST00000303383 C1orf134Q5TEV5 83 aa9.31□□□□□ -0.92
SHCBP1-201ENST00000303383 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
SHCBP1-201ENST00000303383 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
SHCBP1-201ENST00000303383 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
SHCBP1-201ENST00000303383 LAMTOR3Q9UHA4 124 aa9.3□□□□□ -0.92
SHCBP1-201ENST00000303383 PRYO14603 147 aa9.3□□□□□ -0.92
SHCBP1-201ENST00000303383 A0A0U1RQV1 116 aa9.29□□□□□ -0.92
SHCBP1-201ENST00000303383 UQCRQO14949 82 aa9.29□□□□□ -0.92
SHCBP1-201ENST00000303383 FAM19A1Q7Z5A9 133 aa9.29□□□□□ -0.92
SHCBP1-201ENST00000303383 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
SHCBP1-201ENST00000303383 DNAH1Q9P2D7 4330 aa9.29□□□□□ -0.92
SHCBP1-201ENST00000303383 STARD9Q9P2P6 4700 aa9.28□□□□□ -0.92
SHCBP1-201ENST00000303383 A0A087WTM6 91 aa9.28□□□□□ -0.92
SHCBP1-201ENST00000303383 Q6ZR54 194 aa9.28□□□□□ -0.92
SHCBP1-201ENST00000303383 C14orf132Q9NPU4 83 aa9.28□□□□□ -0.92
SHCBP1-201ENST00000303383 DNAH7Q8WXX0 4024 aa9.28□□□□□ -0.92
SHCBP1-201ENST00000303383 CHTF8P0CG12 524 aa9.28□□□□□ -0.92
SHCBP1-201ENST00000303383 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.28□□□□□ -0.92
SHCBP1-201ENST00000303383 JMJD7-PLA2G4BH0Y9G9 81 aa9.28□□□□□ -0.92
SHCBP1-201ENST00000303383 H3BQ85 93 aa9.28□□□□□ -0.92
SHCBP1-201ENST00000303383 LINC00474Q9P2X8 69 aa9.27□□□□□ -0.93
SHCBP1-201ENST00000303383 LINC00528Q8N1L1 170 aa9.27□□□□□ -0.93
SHCBP1-201ENST00000303383 LINC00476Q8WZB0 136 aa9.27□□□□□ -0.93
SHCBP1-201ENST00000303383 UBE2BP63146 152 aa9.26□□□□□ -0.93
SHCBP1-201ENST00000303383 DSCR8Q96T75 97 aa9.26□□□□□ -0.93
SHCBP1-201ENST00000303383 A0A1W2PNN7 141 aa9.25□□□□□ -0.93
SHCBP1-201ENST00000303383 C3orf84H3BNL1 204 aa9.25□□□□□ -0.93
SHCBP1-201ENST00000303383 KRTAP7-1Q8IUC3 87 aa9.25□□□□□ -0.93
SHCBP1-201ENST00000303383 REG3GQ6UW15 175 aa9.24□□□□□ -0.93
SHCBP1-201ENST00000303383 DNAH10Q8IVF4 4471 aa9.24□□□□□ -0.93
SHCBP1-201ENST00000303383 ACYP1P07311 99 aa9.24□□□□□ -0.93
SHCBP1-201ENST00000303383 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
SHCBP1-201ENST00000303383 SDIM1Q6ZPB5 146 aa9.23□□□□□ -0.93
SHCBP1-201ENST00000303383 FAM240AA0A1B0GVK7 77 aa9.22□□□□□ -0.93
SHCBP1-201ENST00000303383 Q6ZRX8 168 aa9.22□□□□□ -0.93
SHCBP1-201ENST00000303383 DEFB105AQ8NG35 78 aa9.22□□□□□ -0.93
SHCBP1-201ENST00000303383 RTL8CO15255 209 aa9.22□□□□□ -0.93
SHCBP1-201ENST00000303383 RBM3P98179 157 aaKnown RBP9.22□□□□□ -0.93
SHCBP1-201ENST00000303383 PHF5AQ7RTV0 110 aaKnown RBP9.2□□□□□ -0.94
SHCBP1-201ENST00000303383 FUSP35637 526 aaKnown RBP eCLIP9.2□□□□□ -0.94
SHCBP1-201ENST00000303383 OBSCN-AS1Q96MR7 158 aa9.2□□□□□ -0.94
SHCBP1-201ENST00000303383 IGLV5-52A0A0A0MRZ9 124 aa9.19□□□□□ -0.94
SHCBP1-201ENST00000303383 VPS13DQ5THJ4 4388 aa9.19□□□□□ -0.94
SHCBP1-201ENST00000303383 SPRR1AP35321 89 aa9.19□□□□□ -0.94
SHCBP1-201ENST00000303383 CYSTM1Q9H1C7 97 aa9.19□□□□□ -0.94
SHCBP1-201ENST00000303383 CRYGAP11844 174 aa9.19□□□□□ -0.94
SHCBP1-201ENST00000303383 TMEM258P61165 79 aa9.18□□□□□ -0.94
SHCBP1-201ENST00000303383 KRTAP4-16G5E9R7 235 aaPredicted RBP9.16□□□□□ -0.94
SHCBP1-201ENST00000303383 COX7CP15954 63 aa9.16□□□□□ -0.94
SHCBP1-201ENST00000303383 Q9BRP9 147 aa9.15□□□□□ -0.94
SHCBP1-201ENST00000303383 TRBV7-7A0A0K0K1E9 115 aa9.15□□□□□ -0.94
SHCBP1-201ENST00000303383 CCKP06307 115 aa9.15□□□□□ -0.94
SHCBP1-201ENST00000303383 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.95
SHCBP1-201ENST00000303383 PRLHP81277 87 aa9.14□□□□□ -0.95
SHCBP1-201ENST00000303383 TNP2Q05952 138 aa9.14□□□□□ -0.95
SHCBP1-201ENST00000303383 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
SHCBP1-201ENST00000303383 PANO1I0J062 215 aa9.14□□□□□ -0.95
SHCBP1-201ENST00000303383 SPACA4Q8TDM5 124 aa9.13□□□□□ -0.95
SHCBP1-201ENST00000303383 BRK1Q8WUW1 75 aa9.13□□□□□ -0.95
SHCBP1-201ENST00000303383 UBE2AP49459 152 aa9.13□□□□□ -0.95
SHCBP1-201ENST00000303383 PDE6GP18545 87 aa9.12□□□□□ -0.95
SHCBP1-201ENST00000303383 ST20-AS1Q8NBB2 130 aa9.11□□□□□ -0.95
SHCBP1-201ENST00000303383 ERC2-IT1O76042 136 aa9.1□□□□□ -0.95
SHCBP1-201ENST00000303383 PMAIP1Q13794 54 aa9.1□□□□□ -0.95
SHCBP1-201ENST00000303383 Q8N377 158 aa9.1□□□□□ -0.95
SHCBP1-201ENST00000303383 Q6ZQT0 140 aa9.09□□□□□ -0.95
SHCBP1-201ENST00000303383 LINC00643Q86TS7 51 aa9.09□□□□□ -0.95
SHCBP1-201ENST00000303383 LOC110117498A0A087WWA1 95 aa9.09□□□□□ -0.95
SHCBP1-201ENST00000303383 KMT2AQ03164 3969 aa9.08□□□□□ -0.96
SHCBP1-201ENST00000303383 SMCR5Q8TEV8 140 aa9.08□□□□□ -0.96
SHCBP1-201ENST00000303383 LINC00846Q9NV44 126 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms