RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
CHAF1A-201ENST00000301280 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
CHAF1A-201ENST00000301280 CCKP06307 115 aa10.3□□□□□ -0.76
CHAF1A-201ENST00000301280 DNAH1Q9P2D7 4330 aa10.29□□□□□ -0.76
CHAF1A-201ENST00000301280 UBE2BP63146 152 aa10.29□□□□□ -0.76
CHAF1A-201ENST00000301280 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
CHAF1A-201ENST00000301280 JMJD7-PLA2G4BH0Y9G9 81 aa10.29□□□□□ -0.76
CHAF1A-201ENST00000301280 NDUFC2-KCTD14E9PQ53 114 aa10.28□□□□□ -0.76
CHAF1A-201ENST00000301280 SERP2Q8N6R1 65 aa10.28□□□□□ -0.76
CHAF1A-201ENST00000301280 H3BNG1 76 aa10.27□□□□□ -0.77
CHAF1A-201ENST00000301280 K7EIL1 84 aa10.25□□□□□ -0.77
CHAF1A-201ENST00000301280 GHRHP01286 108 aa10.25□□□□□ -0.77
CHAF1A-201ENST00000301280 VPREB1P12018 145 aa10.25□□□□□ -0.77
CHAF1A-201ENST00000301280 ETDCA0A1B0GVM5 59 aa10.24□□□□□ -0.77
CHAF1A-201ENST00000301280 J3KT08 172 aa10.24□□□□□ -0.77
CHAF1A-201ENST00000301280 EGFEM1PQ0D2K5 195 aa10.24□□□□□ -0.77
CHAF1A-201ENST00000301280 ST20-AS1Q8NBB2 130 aa10.24□□□□□ -0.77
CHAF1A-201ENST00000301280 HIGD2AQ9BW72 106 aa10.24□□□□□ -0.77
CHAF1A-201ENST00000301280 IGLV6-57P01721 117 aa10.23□□□□□ -0.77
CHAF1A-201ENST00000301280 C7orf33Q8WU49 177 aa10.23□□□□□ -0.77
CHAF1A-201ENST00000301280 TRAV10A0A0B4J240 114 aa10.23□□□□□ -0.77
CHAF1A-201ENST00000301280 M0R378 163 aa10.23□□□□□ -0.77
CHAF1A-201ENST00000301280 DEFB116Q30KQ4 102 aa10.23□□□□□ -0.77
CHAF1A-201ENST00000301280 KRTAP26-1Q6PEX3 210 aa10.23□□□□□ -0.77
CHAF1A-201ENST00000301280 C20orf197Q8N268 126 aa10.23□□□□□ -0.77
CHAF1A-201ENST00000301280 CHTF8P0CG12 524 aa10.21□□□□□ -0.77
CHAF1A-201ENST00000301280 SNURFQ9Y675 71 aa10.2□□□□□ -0.78
CHAF1A-201ENST00000301280 LINC01556Q5JQF7 62 aa10.2□□□□□ -0.78
CHAF1A-201ENST00000301280 PRLHP81277 87 aa10.19□□□□□ -0.78
CHAF1A-201ENST00000301280 RPS28P62857 69 aaKnown RBP10.18□□□□□ -0.78
CHAF1A-201ENST00000301280 C5orf47Q569G3 176 aa10.18□□□□□ -0.78
CHAF1A-201ENST00000301280 Q6ZVQ6 151 aa10.18□□□□□ -0.78
CHAF1A-201ENST00000301280 Q6ZQT0 140 aa10.17□□□□□ -0.78
CHAF1A-201ENST00000301280 TMEM258P61165 79 aa10.17□□□□□ -0.78
CHAF1A-201ENST00000301280 MDFIQ99750 246 aa10.17□□□□□ -0.78
CHAF1A-201ENST00000301280 LINC01547P58512 204 aaPredicted RBP10.15□□□□□ -0.78
CHAF1A-201ENST00000301280 NREPQ16612 68 aa10.14□□□□□ -0.79
CHAF1A-201ENST00000301280 C4orf26Q17RF5 130 aa10.14□□□□□ -0.79
CHAF1A-201ENST00000301280 BPY2O14599 106 aa10.14□□□□□ -0.79
CHAF1A-201ENST00000301280 ELOF1P60002 83 aaKnown RBP10.13□□□□□ -0.79
CHAF1A-201ENST00000301280 Q5XG85 94 aa10.13□□□□□ -0.79
CHAF1A-201ENST00000301280 ERC2-IT1O76042 136 aa10.13□□□□□ -0.79
CHAF1A-201ENST00000301280 TRBV7-6A0A0J9YX20 115 aa10.12□□□□□ -0.79
CHAF1A-201ENST00000301280 DNAH10OSP0CZ25 163 aa10.12□□□□□ -0.79
CHAF1A-201ENST00000301280 LYSTQ99698 3801 aa10.12□□□□□ -0.79
CHAF1A-201ENST00000301280 KRTAP1-5Q9BYS1 174 aa10.12□□□□□ -0.79
CHAF1A-201ENST00000301280 LOC110117498A0A087WWA1 95 aa10.11□□□□□ -0.79
CHAF1A-201ENST00000301280 F8WDY8 70 aa10.11□□□□□ -0.79
CHAF1A-201ENST00000301280 H3BQ85 93 aa10.1□□□□□ -0.79
CHAF1A-201ENST00000301280 LINC00528Q8N1L1 170 aa10.09□□□□□ -0.79
CHAF1A-201ENST00000301280 ATP5EP2Q5VTU8 51 aa10.08□□□□□ -0.8
CHAF1A-201ENST00000301280 MRPL55Q7Z7F7 128 aaKnown RBP10.07□□□□□ -0.8
CHAF1A-201ENST00000301280 H7BZZ5 65 aa10.05□□□□□ -0.8
CHAF1A-201ENST00000301280 RMI2Q96E14 147 aa10.05□□□□□ -0.8
CHAF1A-201ENST00000301280 PHF5AQ7RTV0 110 aaKnown RBP10.05□□□□□ -0.8
CHAF1A-201ENST00000301280 HRCT1Q6UXD1 115 aa10.05□□□□□ -0.8
CHAF1A-201ENST00000301280 Q8N377 158 aa10.05□□□□□ -0.8
CHAF1A-201ENST00000301280 Q9BRP9 147 aa10.03□□□□□ -0.8
CHAF1A-201ENST00000301280 DYNC2H1Q8NCM8 4307 aaKnown RBP10.03□□□□□ -0.8
CHAF1A-201ENST00000301280 TM2D3Q9BRN9 247 aa10.03□□□□□ -0.8
CHAF1A-201ENST00000301280 C1orf137Q5JT78 98 aa10.02□□□□□ -0.8
CHAF1A-201ENST00000301280 HUWE1Q7Z6Z7 4374 aaKnown RBP10.02□□□□□ -0.81
CHAF1A-201ENST00000301280 F8WEM9 126 aa10.01□□□□□ -0.81
CHAF1A-201ENST00000301280 DNAH10Q8IVF4 4471 aa10.01□□□□□ -0.81
CHAF1A-201ENST00000301280 FAM30AQ9NZY2 134 aa10□□□□□ -0.81
CHAF1A-201ENST00000301280 PRR4Q16378 134 aa9.99□□□□□ -0.81
CHAF1A-201ENST00000301280 Q6ZRX8 168 aa9.99□□□□□ -0.81
CHAF1A-201ENST00000301280 TRBV7-4A0A0J9YYF1 115 aa9.98□□□□□ -0.81
CHAF1A-201ENST00000301280 REG3GQ6UW15 175 aa9.98□□□□□ -0.81
CHAF1A-201ENST00000301280 KRTAP7-1Q8IUC3 87 aa9.98□□□□□ -0.81
CHAF1A-201ENST00000301280 TRAV7A0A075B6U4 112 aa9.97□□□□□ -0.81
CHAF1A-201ENST00000301280 TLX1NBP0CAT3 122 aa9.97□□□□□ -0.81
CHAF1A-201ENST00000301280 PDE6GP18545 87 aa9.97□□□□□ -0.81
CHAF1A-201ENST00000301280 UBE2AP49459 152 aa9.97□□□□□ -0.81
CHAF1A-201ENST00000301280 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
CHAF1A-201ENST00000301280 IGLV1-50A0A075B6I6 118 aa9.97□□□□□ -0.81
CHAF1A-201ENST00000301280 EPM2AB3EWF7 344 aa9.97□□□□□ -0.81
CHAF1A-201ENST00000301280 WFDC13Q8IUB5 93 aa9.97□□□□□ -0.81
CHAF1A-201ENST00000301280 FAM236DA0A1B0GTK5 79 aa9.96□□□□□ -0.81
CHAF1A-201ENST00000301280 FAM236CP0DP71 79 aa9.96□□□□□ -0.81
CHAF1A-201ENST00000301280 KCNQ1DNQ9H478 68 aa9.95□□□□□ -0.82
CHAF1A-201ENST00000301280 KLKP1Q107X0 134 aa9.95□□□□□ -0.82
CHAF1A-201ENST00000301280 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
CHAF1A-201ENST00000301280 A0A087WSZ3 146 aa9.94□□□□□ -0.82
CHAF1A-201ENST00000301280 BCE1O60756 84 aa9.94□□□□□ -0.82
CHAF1A-201ENST00000301280 IGLV9-49A0A0B4J1Y8 123 aa9.93□□□□□ -0.82
CHAF1A-201ENST00000301280 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
CHAF1A-201ENST00000301280 CXCL6P80162 114 aa9.93□□□□□ -0.82
CHAF1A-201ENST00000301280 LRCOL1A6NCL2 159 aa9.92□□□□□ -0.82
CHAF1A-201ENST00000301280 A0A1W2PNM2 257 aa9.92□□□□□ -0.82
CHAF1A-201ENST00000301280 ANAPC11Q9NYG5 84 aa9.92□□□□□ -0.82
CHAF1A-201ENST00000301280 DHRS4-AS1Q9P1J3 65 aa9.92□□□□□ -0.82
CHAF1A-201ENST00000301280 KRTAP11-1Q8IUC1 163 aa9.9□□□□□ -0.82
CHAF1A-201ENST00000301280 FP248Q71RG6 208 aaPredicted RBP9.9□□□□□ -0.83
CHAF1A-201ENST00000301280 PANO1I0J062 215 aa9.89□□□□□ -0.83
CHAF1A-201ENST00000301280 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
CHAF1A-201ENST00000301280 LINC00476Q8WZB0 136 aa9.89□□□□□ -0.83
CHAF1A-201ENST00000301280 SMIM29Q86T20 159 aa9.89□□□□□ -0.83
CHAF1A-201ENST00000301280 FBN3Q75N90 2809 aa9.88□□□□□ -0.83
CHAF1A-201ENST00000301280 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms