RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 FAM168BA1KXE4 195 aa13.76□□□□□ -0.21
SOX17-201ENST00000297316 hADV29S1A0JD25 119 aa13.75□□□□□ -0.21
SOX17-201ENST00000297316 DNAH2Q9P225 4427 aa13.74□□□□□ -0.21
SOX17-201ENST00000297316 LRCOL1A6NCL2 159 aa13.74□□□□□ -0.21
SOX17-201ENST00000297316 KRTAP7-1Q8IUC3 87 aa13.73□□□□□ -0.21
SOX17-201ENST00000297316 SMIM20Q8N5G0 67 aa13.73□□□□□ -0.21
SOX17-201ENST00000297316 LINC00846Q9NV44 126 aa13.73□□□□□ -0.21
SOX17-201ENST00000297316 C7orf33Q8WU49 177 aa13.72□□□□□ -0.21
SOX17-201ENST00000297316 WWC2-AS2Q96NR7 200 aa13.72□□□□□ -0.21
SOX17-201ENST00000297316 ELOF1P60002 83 aaKnown RBP13.71□□□□□ -0.21
SOX17-201ENST00000297316 COX7BP24311 80 aa13.7□□□□□ -0.22
SOX17-201ENST00000297316 NKAPP1Q8N9T2 125 aa13.7□□□□□ -0.22
SOX17-201ENST00000297316 CNBPP62633 177 aaKnown RBP13.69□□□□□ -0.22
SOX17-201ENST00000297316 PLA2G2DQ9UNK4 145 aa13.69□□□□□ -0.22
SOX17-201ENST00000297316 LOC107984640A0A0U1RRK4 108 aa13.68□□□□□ -0.22
SOX17-201ENST00000297316 LY6G6CO95867 125 aa13.68□□□□□ -0.22
SOX17-201ENST00000297316 Q6ZQY7 126 aa13.68□□□□□ -0.22
SOX17-201ENST00000297316 TMEM256-PLSCR3K7ERE1 68 aa13.68□□□□□ -0.22
SOX17-201ENST00000297316 Q6ZR54 194 aa13.68□□□□□ -0.22
SOX17-201ENST00000297316 IGKV3D-7A0A0C4DH55 119 aa13.67□□□□□ -0.22
SOX17-201ENST00000297316 C3orf22Q8N5N4 141 aa13.66□□□□□ -0.22
SOX17-201ENST00000297316 A0A096LNI7 61 aa13.65□□□□□ -0.22
SOX17-201ENST00000297316 TRBV7-6A0A0J9YX20 115 aa13.65□□□□□ -0.22
SOX17-201ENST00000297316 HIST1H4AP62805 103 aaKnown RBP13.65□□□□□ -0.22
SOX17-201ENST00000297316 Q6JHZ5 121 aa13.65□□□□□ -0.22
SOX17-201ENST00000297316 C14orf177Q52M58 125 aa13.65□□□□□ -0.22
SOX17-201ENST00000297316 LINC00528Q8N1L1 170 aa13.65□□□□□ -0.22
SOX17-201ENST00000297316 KCNQ1DNQ9H478 68 aa13.65□□□□□ -0.22
SOX17-201ENST00000297316 IGLV5-37A0A075B6J1 123 aa13.64□□□□□ -0.23
SOX17-201ENST00000297316 IGKV2-24A0A0C4DH68 120 aa13.64□□□□□ -0.23
SOX17-201ENST00000297316 RPL37AP8A6NKH3 93 aa13.64□□□□□ -0.23
SOX17-201ENST00000297316 CCKP06307 115 aa13.64□□□□□ -0.23
SOX17-201ENST00000297316 FAM19A5Q7Z5A7 132 aaPredicted RBP13.64□□□□□ -0.23
SOX17-201ENST00000297316 UQCRQO14949 82 aa13.63□□□□□ -0.23
SOX17-201ENST00000297316 JMJD7-PLA2G4BH0Y9G9 81 aa13.63□□□□□ -0.23
SOX17-201ENST00000297316 FUSP35637 526 aaKnown RBP eCLIP13.63□□□□□ -0.23
SOX17-201ENST00000297316 C9orf153Q5TBE3 101 aa13.63□□□□□ -0.23
SOX17-201ENST00000297316 CHTF8P0CG12 524 aa13.6□□□□□ -0.23
SOX17-201ENST00000297316 LINC00476Q8WZB0 136 aa13.6□□□□□ -0.23
SOX17-201ENST00000297316 IGLV1-50A0A075B6I6 118 aa13.59□□□□□ -0.23
SOX17-201ENST00000297316 ATOX1O00244 68 aa13.59□□□□□ -0.23
SOX17-201ENST00000297316 A0A087WVE0 104 aa13.58□□□□□ -0.23
SOX17-201ENST00000297316 COX7CP15954 63 aa13.58□□□□□ -0.23
SOX17-201ENST00000297316 A0A087WTM6 91 aa13.58□□□□□ -0.24
SOX17-201ENST00000297316 C16orf90A8MZG2 172 aa13.58□□□□□ -0.24
SOX17-201ENST00000297316 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.58□□□□□ -0.24
SOX17-201ENST00000297316 HYDINQ4G0P3 5121 aa13.57□□□□□ -0.24
SOX17-201ENST00000297316 HECTD4Q9Y4D8 3996 aa13.57□□□□□ -0.24
SOX17-201ENST00000297316 C9orf163Q8N9P6 203 aa13.57□□□□□ -0.24
SOX17-201ENST00000297316 A0A1W2PNN7 141 aa13.56□□□□□ -0.24
SOX17-201ENST00000297316 MRPL55Q7Z7F7 128 aaKnown RBP13.56□□□□□ -0.24
SOX17-201ENST00000297316 DNAH6Q9C0G6 4158 aa13.56□□□□□ -0.24
SOX17-201ENST00000297316 KRTAP4-16G5E9R7 235 aaPredicted RBP13.55□□□□□ -0.24
SOX17-201ENST00000297316 LAMTOR3Q9UHA4 124 aa13.55□□□□□ -0.24
SOX17-201ENST00000297316 ALMS1Q8TCU4 4167 aa13.55□□□□□ -0.24
SOX17-201ENST00000297316 C1orf134Q5TEV5 83 aa13.53□□□□□ -0.24
SOX17-201ENST00000297316 DNAH17Q9UFH2 4485 aa13.53□□□□□ -0.24
SOX17-201ENST00000297316 PRYO14603 147 aa13.53□□□□□ -0.24
SOX17-201ENST00000297316 SPRR1AP35321 89 aa13.53□□□□□ -0.24
SOX17-201ENST00000297316 PANO1I0J062 215 aa13.51□□□□□ -0.25
SOX17-201ENST00000297316 RBM3P98179 157 aaKnown RBP13.51□□□□□ -0.25
SOX17-201ENST00000297316 Q9BRP9 147 aa13.5□□□□□ -0.25
SOX17-201ENST00000297316 Q6ZRX8 168 aa13.5□□□□□ -0.25
SOX17-201ENST00000297316 C3orf84H3BNL1 204 aa13.49□□□□□ -0.25
SOX17-201ENST00000297316 CRYGAP11844 174 aa13.48□□□□□ -0.25
SOX17-201ENST00000297316 FRAS1Q86XX4 4008 aa13.48□□□□□ -0.25
SOX17-201ENST00000297316 Q6ZQT0 140 aa13.48□□□□□ -0.25
SOX17-201ENST00000297316 H3BQ85 93 aa13.47□□□□□ -0.25
SOX17-201ENST00000297316 ETDCA0A1B0GVM5 59 aa13.46□□□□□ -0.25
SOX17-201ENST00000297316 ATP5EP2Q5VTU8 51 aa13.46□□□□□ -0.26
SOX17-201ENST00000297316 SERP2Q8N6R1 65 aa13.45□□□□□ -0.26
SOX17-201ENST00000297316 LOC110117498A0A087WWA1 95 aa13.45□□□□□ -0.26
SOX17-201ENST00000297316 TNP2Q05952 138 aa13.45□□□□□ -0.26
SOX17-201ENST00000297316 UBL5Q9BZL1 73 aa13.45□□□□□ -0.26
SOX17-201ENST00000297316 RTL8CO15255 209 aa13.44□□□□□ -0.26
SOX17-201ENST00000297316 PHF5AQ7RTV0 110 aaKnown RBP13.44□□□□□ -0.26
SOX17-201ENST00000297316 LINC01547P58512 204 aaPredicted RBP13.43□□□□□ -0.26
SOX17-201ENST00000297316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.43□□□□□ -0.26
SOX17-201ENST00000297316 REG3GQ6UW15 175 aa13.42□□□□□ -0.26
SOX17-201ENST00000297316 DEFB105AQ8NG35 78 aa13.42□□□□□ -0.26
SOX17-201ENST00000297316 CYSTM1Q9H1C7 97 aa13.42□□□□□ -0.26
SOX17-201ENST00000297316 ERC2-IT1O76042 136 aa13.42□□□□□ -0.26
SOX17-201ENST00000297316 FAM19A1Q7Z5A9 133 aa13.42□□□□□ -0.26
SOX17-201ENST00000297316 KRTAP11-1Q8IUC1 163 aa13.42□□□□□ -0.26
SOX17-201ENST00000297316 Q8N377 158 aa13.42□□□□□ -0.26
SOX17-201ENST00000297316 DSCR8Q96T75 97 aa13.41□□□□□ -0.26
SOX17-201ENST00000297316 DHRS4-AS1Q9P1J3 65 aa13.41□□□□□ -0.26
SOX17-201ENST00000297316 ST20-AS1Q8NBB2 130 aa13.41□□□□□ -0.26
SOX17-201ENST00000297316 TRBV7-4A0A0J9YYF1 115 aa13.4□□□□□ -0.26
SOX17-201ENST00000297316 GHRHP01286 108 aa13.4□□□□□ -0.26
SOX17-201ENST00000297316 DPH3Q96FX2 82 aa13.39□□□□□ -0.27
SOX17-201ENST00000297316 DNAH11Q96DT5 4516 aa13.38□□□□□ -0.27
SOX17-201ENST00000297316 SACSQ9NZJ4 4579 aa13.37□□□□□ -0.27
SOX17-201ENST00000297316 UBE2BP63146 152 aa13.36□□□□□ -0.27
SOX17-201ENST00000297316 C5orf47Q569G3 176 aa13.36□□□□□ -0.27
SOX17-201ENST00000297316 SPACA4Q8TDM5 124 aa13.36□□□□□ -0.27
SOX17-201ENST00000297316 IGLV5-52A0A0A0MRZ9 124 aa13.35□□□□□ -0.27
SOX17-201ENST00000297316 LINC00474Q9P2X8 69 aa13.34□□□□□ -0.27
SOX17-201ENST00000297316 PKIGQ9Y2B9 76 aa13.34□□□□□ -0.27
SOX17-201ENST00000297316 DNAH5Q8TE73 4624 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms