RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 FLNBO75369 2602 aaKnown RBP7.95□□□□□ -1.14
SHROOM3-201ENST00000296043 STAB2Q8WWQ8 2551 aa7.94□□□□□ -1.14
SHROOM3-201ENST00000296043 A0A0G2JQZ4 141 aa7.94□□□□□ -1.14
SHROOM3-201ENST00000296043 A0A1W2PNN7 141 aa7.94□□□□□ -1.14
SHROOM3-201ENST00000296043 Q96NJ1 140 aa7.94□□□□□ -1.14
SHROOM3-201ENST00000296043 LY6G6DO95868 133 aa7.94□□□□□ -1.14
SHROOM3-201ENST00000296043 ITPR3Q14573 2671 aa7.94□□□□□ -1.14
SHROOM3-201ENST00000296043 BAHCC1Q9P281 2608 aa7.93□□□□□ -1.14
SHROOM3-201ENST00000296043 GCN1Q92616 2671 aaKnown RBP7.93□□□□□ -1.14
SHROOM3-201ENST00000296043 IGLV1-51P01701 117 aa7.93□□□□□ -1.14
SHROOM3-201ENST00000296043 AVPP01185 164 aa7.93□□□□□ -1.14
SHROOM3-201ENST00000296043 PHF5AQ7RTV0 110 aaKnown RBP7.91□□□□□ -1.14
SHROOM3-201ENST00000296043 FAM229AH3BQW9 127 aa7.91□□□□□ -1.14
SHROOM3-201ENST00000296043 MRPL34Q9BQ48 92 aaKnown RBP7.91□□□□□ -1.14
SHROOM3-201ENST00000296043 CFAP46Q8IYW2 2715 aa7.89□□□□□ -1.15
SHROOM3-201ENST00000296043 Q75L30 129 aa7.89□□□□□ -1.15
SHROOM3-201ENST00000296043 CYSTM1Q9H1C7 97 aa7.89□□□□□ -1.15
SHROOM3-201ENST00000296043 CSAG1Q6PB30 78 aa7.89□□□□□ -1.15
SHROOM3-201ENST00000296043 SPANXA2-OT1Q8N9U9 137 aa7.89□□□□□ -1.15
SHROOM3-201ENST00000296043 DSCR10P59022 87 aa7.89□□□□□ -1.15
SHROOM3-201ENST00000296043 C8orf17Q9NRJ1 99 aa7.88□□□□□ -1.15
SHROOM3-201ENST00000296043 FP248Q71RG6 208 aaPredicted RBP7.88□□□□□ -1.15
SHROOM3-201ENST00000296043 IGFL1Q6UW32 110 aa7.87□□□□□ -1.15
SHROOM3-201ENST00000296043 PRO3102Q9H379 93 aa7.87□□□□□ -1.15
SHROOM3-201ENST00000296043 HELZ2Q9BYK8 2649 aaKnown RBP7.87□□□□□ -1.15
SHROOM3-201ENST00000296043 UNC79Q9P2D8 2635 aa7.86□□□□□ -1.15
SHROOM3-201ENST00000296043 COL6A5A8TX70 2615 aa7.85□□□□□ -1.15
SHROOM3-201ENST00000296043 FLNAP21333 2647 aaKnown RBP7.84□□□□□ -1.15
SHROOM3-201ENST00000296043 Q6ZRP5 223 aa7.83□□□□□ -1.16
SHROOM3-201ENST00000296043 OBSCN-AS1Q96MR7 158 aa7.83□□□□□ -1.16
SHROOM3-201ENST00000296043 FAM104AQ969W3 186 aa7.83□□□□□ -1.16
SHROOM3-201ENST00000296043 Q8N1X5 172 aa7.82□□□□□ -1.16
SHROOM3-201ENST00000296043 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
SHROOM3-201ENST00000296043 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
SHROOM3-201ENST00000296043 LINC00528Q8N1L1 170 aa7.8□□□□□ -1.16
SHROOM3-201ENST00000296043 PRR26Q8N8Z3 221 aa7.8□□□□□ -1.16
SHROOM3-201ENST00000296043 A0A0A0MQY5 61 aa7.79□□□□□ -1.16
SHROOM3-201ENST00000296043 GVQW2A0A096LPI5 108 aaPredicted RBP7.79□□□□□ -1.16
SHROOM3-201ENST00000296043 NSD1Q96L73 2696 aaPredicted RBP7.79□□□□□ -1.16
SHROOM3-201ENST00000296043 C16orf90A8MZG2 172 aa7.78□□□□□ -1.16
SHROOM3-201ENST00000296043 Q5VV11 94 aa7.77□□□□□ -1.17
SHROOM3-201ENST00000296043 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
SHROOM3-201ENST00000296043 KCNQ1DNQ9H478 68 aa7.77□□□□□ -1.17
SHROOM3-201ENST00000296043 LINC00588Q9Y4M8 146 aa7.76□□□□□ -1.17
SHROOM3-201ENST00000296043 Q8N377 158 aa7.76□□□□□ -1.17
SHROOM3-201ENST00000296043 MAP1AP78559 2803 aaPredicted RBP7.76□□□□□ -1.17
SHROOM3-201ENST00000296043 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
SHROOM3-201ENST00000296043 SMR3AQ99954 134 aa7.76□□□□□ -1.17
SHROOM3-201ENST00000296043 COL4A2P08572 1712 aa7.76□□□□□ -1.17
SHROOM3-201ENST00000296043 OXTP01178 125 aa7.74□□□□□ -1.17
SHROOM3-201ENST00000296043 C9orf163Q8N9P6 203 aa7.74□□□□□ -1.17
SHROOM3-201ENST00000296043 RTL8CO15255 209 aa7.73□□□□□ -1.17
SHROOM3-201ENST00000296043 CSNK1G2-AS1Q8NCQ2 148 aa7.72□□□□□ -1.17
SHROOM3-201ENST00000296043 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
SHROOM3-201ENST00000296043 SPINK7P58062 85 aa7.72□□□□□ -1.17
SHROOM3-201ENST00000296043 Q8N9P0 234 aaPredicted RBP7.72□□□□□ -1.17
SHROOM3-201ENST00000296043 IGLV1-50A0A075B6I6 118 aa7.71□□□□□ -1.18
SHROOM3-201ENST00000296043 PLA2G2DQ9UNK4 145 aa7.71□□□□□ -1.18
SHROOM3-201ENST00000296043 DMAC1Q96GE9 116 aa7.7□□□□□ -1.18
SHROOM3-201ENST00000296043 A0A1W2PNM2 257 aa7.68□□□□□ -1.18
SHROOM3-201ENST00000296043 A0A1B0GU33 70 aa7.68□□□□□ -1.18
SHROOM3-201ENST00000296043 ZNF575Q86XF7 245 aa7.67□□□□□ -1.18
SHROOM3-201ENST00000296043 Q8NAQ8 132 aa7.66□□□□□ -1.18
SHROOM3-201ENST00000296043 A0A1W2PPR1 153 aa7.66□□□□□ -1.18
SHROOM3-201ENST00000296043 ANAPC11Q9NYG5 84 aa7.65□□□□□ -1.18
SHROOM3-201ENST00000296043 C16orf95Q9H693 158 aa7.65□□□□□ -1.19
SHROOM3-201ENST00000296043 KRTAP10-9P60411 292 aa7.64□□□□□ -1.19
SHROOM3-201ENST00000296043 TEP1Q99973 2627 aaKnown RBP7.64□□□□□ -1.19
SHROOM3-201ENST00000296043 TEX15Q9BXT5 2789 aa7.64□□□□□ -1.19
SHROOM3-201ENST00000296043 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
SHROOM3-201ENST00000296043 C15orf56Q8N910 161 aa7.63□□□□□ -1.19
SHROOM3-201ENST00000296043 IGLV7-46A0A075B6I9 117 aa7.62□□□□□ -1.19
SHROOM3-201ENST00000296043 LINC00483Q53H64 154 aa7.62□□□□□ -1.19
SHROOM3-201ENST00000296043 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
SHROOM3-201ENST00000296043 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
SHROOM3-201ENST00000296043 HRES1P13985 223 aa7.59□□□□□ -1.2
SHROOM3-201ENST00000296043 ITPR1Q14643 2758 aa7.57□□□□□ -1.2
SHROOM3-201ENST00000296043 DNAH10OSP0CZ25 163 aa7.57□□□□□ -1.2
SHROOM3-201ENST00000296043 UTP20O75691 2785 aaKnown RBP7.56□□□□□ -1.2
SHROOM3-201ENST00000296043 LINC00304Q8N9R0 145 aa7.55□□□□□ -1.2
SHROOM3-201ENST00000296043 NBEAL2Q6ZNJ1 2754 aa7.54□□□□□ -1.2
SHROOM3-201ENST00000296043 H3BNG1 76 aa7.54□□□□□ -1.2
SHROOM3-201ENST00000296043 COX6B2Q6YFQ2 88 aa7.54□□□□□ -1.2
SHROOM3-201ENST00000296043 IGLV5-37A0A075B6J1 123 aa7.54□□□□□ -1.2
SHROOM3-201ENST00000296043 NBDYA0A0U1RRE5 68 aa7.54□□□□□ -1.2
SHROOM3-201ENST00000296043 CNBPP62633 177 aaKnown RBP7.53□□□□□ -1.2
SHROOM3-201ENST00000296043 APCP25054 2843 aa7.5□□□□□ -1.21
SHROOM3-201ENST00000296043 ZNF292O60281 2723 aa7.48□□□□□ -1.21
SHROOM3-201ENST00000296043 ZNF861PO60384 105 aa7.47□□□□□ -1.21
SHROOM3-201ENST00000296043 A0A096LNT2 108 aa7.47□□□□□ -1.21
SHROOM3-201ENST00000296043 SPRR4Q96PI1 79 aa7.47□□□□□ -1.21
SHROOM3-201ENST00000296043 PRR34Q9NV39 138 aa7.46□□□□□ -1.22
SHROOM3-201ENST00000296043 GIG44P09565 113 aaPredicted RBP7.45□□□□□ -1.22
SHROOM3-201ENST00000296043 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
SHROOM3-201ENST00000296043 ROMO1P60602 79 aa7.44□□□□□ -1.22
SHROOM3-201ENST00000296043 ITPR2Q14571 2701 aa7.43□□□□□ -1.22
SHROOM3-201ENST00000296043 SETXQ7Z333 2677 aaKnown RBP7.43□□□□□ -1.22
SHROOM3-201ENST00000296043 CASC10Q5T4H9 136 aa7.41□□□□□ -1.22
SHROOM3-201ENST00000296043 LRBAP50851 2863 aa7.41□□□□□ -1.22
SHROOM3-201ENST00000296043 C19orf73Q9NVV2 129 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms