RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 NPC2P61916 151 aa14.18□□□□□ -0.14
U2AF1-201ENST00000291552 KRTAP9-2Q9BYQ4 174 aa14.18□□□□□ -0.14
U2AF1-201ENST00000291552 SLC7A5P1Q8MH63 180 aa14.17□□□□□ -0.14
U2AF1-201ENST00000291552 TRAV23DV6A0A075B6W5 121 aa14.16□□□□□ -0.14
U2AF1-201ENST00000291552 S100A7L2Q5SY68 101 aa14.16□□□□□ -0.14
U2AF1-201ENST00000291552 SSBP3-AS1Q7Z2R9 100 aa14.15□□□□□ -0.14
U2AF1-201ENST00000291552 Q8N377 158 aa14.15□□□□□ -0.14
U2AF1-201ENST00000291552 E9PLD3 99 aa14.14□□□□□ -0.15
U2AF1-201ENST00000291552 RPS29P62273 56 aaKnown RBP14.13□□□□□ -0.15
U2AF1-201ENST00000291552 ZNF73O43830 326 aaPredicted RBP14.11□□□□□ -0.15
U2AF1-201ENST00000291552 LITAFQ99732 161 aa14.11□□□□□ -0.15
U2AF1-201ENST00000291552 ASB16-AS1Q495Z4 193 aa14.1□□□□□ -0.15
U2AF1-201ENST00000291552 ST20-AS1Q8NBB2 130 aa14.1□□□□□ -0.15
U2AF1-201ENST00000291552 KRTAP4-1Q9BYQ7 146 aa14.09□□□□□ -0.15
U2AF1-201ENST00000291552 SYS1-DBNDD2H3BUS1 97 aa14.07□□□□□ -0.16
U2AF1-201ENST00000291552 JOSD1Q15040 202 aaPredicted RBP14.07□□□□□ -0.16
U2AF1-201ENST00000291552 LINC00308Q8TCZ7 52 aa14.05□□□□□ -0.16
U2AF1-201ENST00000291552 HIST1H2BKO60814 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST1H2BJP06899 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST1H2BOP23527 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST1H2BBP33778 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST1H2BDP58876 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST1H2BCP62807 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST2H2BEQ16778 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.04□□□□□ -0.16
U2AF1-201ENST00000291552 C9orf153Q5TBE3 101 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST1H2BHQ93079 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST1H2BNQ99877 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 HIST1H2BMQ99879 126 aa14.04□□□□□ -0.16
U2AF1-201ENST00000291552 SLC25A20O43772 301 aa14.03□□□□□ -0.16
U2AF1-201ENST00000291552 LINC01545Q5VT33 79 aa14.02□□□□□ -0.17
U2AF1-201ENST00000291552 SPANXCQ9NY87 97 aa14.02□□□□□ -0.17
U2AF1-201ENST00000291552 TTTY13Q9BZ97 58 aa14.01□□□□□ -0.17
U2AF1-201ENST00000291552 A6NJY4 79 aa14□□□□□ -0.17
U2AF1-201ENST00000291552 TIMM17BO60830 172 aa14□□□□□ -0.17
U2AF1-201ENST00000291552 C5orf52A6NGY3 159 aa13.97□□□□□ -0.17
U2AF1-201ENST00000291552 SPRR1BP22528 89 aa13.97□□□□□ -0.17
U2AF1-201ENST00000291552 ZNF815PA8K554 130 aa13.96□□□□□ -0.17
U2AF1-201ENST00000291552 SEC61BP60468 96 aaKnown RBP13.96□□□□□ -0.17
U2AF1-201ENST00000291552 PET117Q6UWS5 81 aa13.96□□□□□ -0.17
U2AF1-201ENST00000291552 OR13C6PQ8NH95 151 aa13.96□□□□□ -0.17
U2AF1-201ENST00000291552 XP32Q5T750 250 aa13.95□□□□□ -0.18
U2AF1-201ENST00000291552 CBY1Q9Y3M2 126 aa13.95□□□□□ -0.18
U2AF1-201ENST00000291552 HINT1P49773 126 aaPredicted RBP13.94□□□□□ -0.18
U2AF1-201ENST00000291552 SPANXDQ9BXN6 97 aa13.93□□□□□ -0.18
U2AF1-201ENST00000291552 C3orf79P0CE67 100 aa13.91□□□□□ -0.18
U2AF1-201ENST00000291552 DHRS4-AS1Q9P1J3 65 aa13.91□□□□□ -0.18
U2AF1-201ENST00000291552 ELOF1P60002 83 aaKnown RBP13.9□□□□□ -0.18
U2AF1-201ENST00000291552 C6orf99Q4VX62 202 aa13.88□□□□□ -0.19
U2AF1-201ENST00000291552 COX7BP24311 80 aa13.87□□□□□ -0.19
U2AF1-201ENST00000291552 HRCT1Q6UXD1 115 aa13.86□□□□□ -0.19
U2AF1-201ENST00000291552 COA6Q5JTJ3 125 aaKnown RBP13.84□□□□□ -0.19
U2AF1-201ENST00000291552 LINC00518Q8N0U6 118 aa13.84□□□□□ -0.19
U2AF1-201ENST00000291552 SLC25A34Q6PIV7 304 aa13.83□□□□□ -0.2
U2AF1-201ENST00000291552 KRTDAPP60985 99 aa13.82□□□□□ -0.2
U2AF1-201ENST00000291552 ANKRD39Q53RE8 183 aa13.82□□□□□ -0.2
U2AF1-201ENST00000291552 LAMTOR3Q9UHA4 124 aa13.82□□□□□ -0.2
U2AF1-201ENST00000291552 LINC01547P58512 204 aaPredicted RBP13.81□□□□□ -0.2
U2AF1-201ENST00000291552 LIMD2Q9BT23 127 aa13.81□□□□□ -0.2
U2AF1-201ENST00000291552 Q1RN00 199 aa13.8□□□□□ -0.2
U2AF1-201ENST00000291552 DEFB105AQ8NG35 78 aa13.78□□□□□ -0.2
U2AF1-201ENST00000291552 SCGB1D4Q6XE38 83 aa13.77□□□□□ -0.21
U2AF1-201ENST00000291552 TRBV7-6A0A0J9YX20 115 aa13.76□□□□□ -0.21
U2AF1-201ENST00000291552 KRTAP9-6A0A140TA67 174 aa13.76□□□□□ -0.21
U2AF1-201ENST00000291552 TAL2Q16559 108 aa13.76□□□□□ -0.21
U2AF1-201ENST00000291552 LCE2CQ5TA81 110 aa13.76□□□□□ -0.21
U2AF1-201ENST00000291552 SMIM29Q86T20 159 aa13.76□□□□□ -0.21
U2AF1-201ENST00000291552 ATOH7Q8N100 152 aa13.75□□□□□ -0.21
U2AF1-201ENST00000291552 TEX49A0A1B0GTD5 131 aa13.74□□□□□ -0.21
U2AF1-201ENST00000291552 C9orf92A6NGG3 77 aa13.73□□□□□ -0.21
U2AF1-201ENST00000291552 CD164Q04900 197 aa13.73□□□□□ -0.21
U2AF1-201ENST00000291552 KRTAP19-2Q3LHN2 52 aa13.73□□□□□ -0.21
U2AF1-201ENST00000291552 PCP2Q8IVA1 136 aa13.73□□□□□ -0.21
U2AF1-201ENST00000291552 IFITM1P13164 125 aa13.72□□□□□ -0.21
U2AF1-201ENST00000291552 IGLV5-48A0A075B6I7 105 aa13.71□□□□□ -0.21
U2AF1-201ENST00000291552 A0A1B0GWB2 263 aa13.71□□□□□ -0.21
U2AF1-201ENST00000291552 PRO1933Q9H354 126 aa13.71□□□□□ -0.21
U2AF1-201ENST00000291552 C20orf202A1L168 122 aa13.7□□□□□ -0.22
U2AF1-201ENST00000291552 PCOTHQ58A44 107 aa13.7□□□□□ -0.22
U2AF1-201ENST00000291552 MUSTN1Q8IVN3 82 aa13.7□□□□□ -0.22
U2AF1-201ENST00000291552 A0A0G2JQZ4 141 aa13.69□□□□□ -0.22
U2AF1-201ENST00000291552 A6NDN8 102 aa13.68□□□□□ -0.22
U2AF1-201ENST00000291552 H7C2G1 150 aa13.68□□□□□ -0.22
U2AF1-201ENST00000291552 Q6ZVH6 145 aa13.67□□□□□ -0.22
U2AF1-201ENST00000291552 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
U2AF1-201ENST00000291552 Q5XG85 94 aa13.66□□□□□ -0.22
U2AF1-201ENST00000291552 AKR1D1P51857 326 aa13.63□□□□□ -0.23
U2AF1-201ENST00000291552 C1orf195Q5TG92 126 aa13.63□□□□□ -0.23
U2AF1-201ENST00000291552 IGLV8-61A0A075B6I0 122 aa13.62□□□□□ -0.23
U2AF1-201ENST00000291552 SMIM11BQ8TCY0 68 aa13.62□□□□□ -0.23
U2AF1-201ENST00000291552 TRAV13-2A0A0B4J235 113 aa13.58□□□□□ -0.24
U2AF1-201ENST00000291552 A4D1N5 150 aa13.58□□□□□ -0.24
U2AF1-201ENST00000291552 MT1HP80294 61 aa13.56□□□□□ -0.24
U2AF1-201ENST00000291552 NHP2Q9NX24 153 aaKnown RBP13.54□□□□□ -0.24
U2AF1-201ENST00000291552 SNRPEP62304 92 aaKnown RBP13.51□□□□□ -0.25
U2AF1-201ENST00000291552 HIST3H2BBQ8N257 126 aa13.49□□□□□ -0.25
U2AF1-201ENST00000291552 RPL37P61927 97 aaKnown RBP13.48□□□□□ -0.25
U2AF1-201ENST00000291552 LINC00575Q6W349 94 aa13.48□□□□□ -0.25
U2AF1-201ENST00000291552 HIST1H2BLQ99880 126 aa13.48□□□□□ -0.25
U2AF1-201ENST00000291552 FLGP20930 4061 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms