RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 RETNLBQ9BQ08 111 aa5.74□□□□□ -1.49
CCDC58-201ENST00000291458 LINC00587B1AMM8 73 aa5.73□□□□□ -1.49
CCDC58-201ENST00000291458 SYS1-DBNDD2H3BUS1 97 aa5.73□□□□□ -1.49
CCDC58-201ENST00000291458 C3orf22Q8N5N4 141 aa5.73□□□□□ -1.49
CCDC58-201ENST00000291458 PPDPFQ9H3Y8 114 aa5.73□□□□□ -1.49
CCDC58-201ENST00000291458 NMUP48645 174 aa5.72□□□□□ -1.49
CCDC58-201ENST00000291458 KRTDAPP60985 99 aa5.72□□□□□ -1.49
CCDC58-201ENST00000291458 LINC00304Q8N9R0 145 aa5.72□□□□□ -1.49
CCDC58-201ENST00000291458 UBR4Q5T4S7 5183 aa5.71□□□□□ -1.49
CCDC58-201ENST00000291458 A0A0J9YXY3 114 aa5.71□□□□□ -1.5
CCDC58-201ENST00000291458 E9PLD3 99 aa5.71□□□□□ -1.5
CCDC58-201ENST00000291458 DDTP30046 118 aa5.71□□□□□ -1.5
CCDC58-201ENST00000291458 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.5
CCDC58-201ENST00000291458 S100A7L2Q5SY68 101 aa5.71□□□□□ -1.5
CCDC58-201ENST00000291458 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
CCDC58-201ENST00000291458 TTTY13Q9BZ97 58 aa5.71□□□□□ -1.5
CCDC58-201ENST00000291458 C3orf79P0CE67 100 aa5.7□□□□□ -1.5
CCDC58-201ENST00000291458 S100A12P80511 92 aa5.7□□□□□ -1.5
CCDC58-201ENST00000291458 ADAMTSL4-AS1Q5T5F5 129 aa5.7□□□□□ -1.5
CCDC58-201ENST00000291458 SOSTDC1Q6X4U4 206 aa5.7□□□□□ -1.5
CCDC58-201ENST00000291458 SPANXB1Q9NS25 103 aaPredicted RBP5.7□□□□□ -1.5
CCDC58-201ENST00000291458 ZNF815PA8K554 130 aa5.69□□□□□ -1.5
CCDC58-201ENST00000291458 TRIAP1O43715 76 aa5.69□□□□□ -1.5
CCDC58-201ENST00000291458 LINC01545Q5VT33 79 aa5.69□□□□□ -1.5
CCDC58-201ENST00000291458 ATOH7Q8N100 152 aa5.69□□□□□ -1.5
CCDC58-201ENST00000291458 SMCR5Q8TEV8 140 aa5.69□□□□□ -1.5
CCDC58-201ENST00000291458 KCNQ1DNQ9H478 68 aa5.69□□□□□ -1.5
CCDC58-201ENST00000291458 ZNF706Q9Y5V0 76 aaPredicted RBP5.69□□□□□ -1.5
CCDC58-201ENST00000291458 SPRR1AP35321 89 aa5.68□□□□□ -1.5
CCDC58-201ENST00000291458 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
CCDC58-201ENST00000291458 GAGE2AQ6NT46 116 aa5.68□□□□□ -1.5
CCDC58-201ENST00000291458 PET117Q6UWS5 81 aa5.68□□□□□ -1.5
CCDC58-201ENST00000291458 LINC00337Q8N6G1 96 aa5.68□□□□□ -1.5
CCDC58-201ENST00000291458 TRAV23DV6A0A075B6W5 121 aa5.67□□□□□ -1.5
CCDC58-201ENST00000291458 ERC2-IT1O76042 136 aa5.67□□□□□ -1.5
CCDC58-201ENST00000291458 LRP2P98164 4655 aa5.66□□□□□ -1.5
CCDC58-201ENST00000291458 IGLV9-49A0A0B4J1Y8 123 aa5.66□□□□□ -1.5
CCDC58-201ENST00000291458 TRBV10-2A0A0K0K1G8 114 aa5.66□□□□□ -1.5
CCDC58-201ENST00000291458 KRTAP4-16G5E9R7 235 aaPredicted RBP5.66□□□□□ -1.5
CCDC58-201ENST00000291458 Q8NBF4 154 aa5.66□□□□□ -1.5
CCDC58-201ENST00000291458 OR13C6PQ8NH95 151 aa5.66□□□□□ -1.5
CCDC58-201ENST00000291458 LOC107984156A0A0G2JMH3 177 aa5.65□□□□□ -1.5
CCDC58-201ENST00000291458 C20orf202A1L168 122 aa5.65□□□□□ -1.5
CCDC58-201ENST00000291458 MOBPQ13875 183 aa5.65□□□□□ -1.5
CCDC58-201ENST00000291458 Q6ZRX8 168 aa5.65□□□□□ -1.5
CCDC58-201ENST00000291458 ARL17AQ8IVW1 177 aa5.65□□□□□ -1.5
CCDC58-201ENST00000291458 LINC00308Q8TCZ7 52 aa5.65□□□□□ -1.5
CCDC58-201ENST00000291458 LITAFQ99732 161 aa5.65□□□□□ -1.5
CCDC58-201ENST00000291458 Q9BRP9 147 aa5.65□□□□□ -1.5
CCDC58-201ENST00000291458 ZNF73O43830 326 aaPredicted RBP5.64□□□□□ -1.51
CCDC58-201ENST00000291458 NDUFC2O95298 119 aa5.64□□□□□ -1.51
CCDC58-201ENST00000291458 IGLV6-57P01721 117 aa5.64□□□□□ -1.51
CCDC58-201ENST00000291458 SCGB1D4Q6XE38 83 aa5.64□□□□□ -1.51
CCDC58-201ENST00000291458 COA6Q5JTJ3 125 aaKnown RBP5.63□□□□□ -1.51
CCDC58-201ENST00000291458 C9orf153Q5TBE3 101 aa5.63□□□□□ -1.51
CCDC58-201ENST00000291458 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
CCDC58-201ENST00000291458 TIMM17BO60830 172 aa5.62□□□□□ -1.51
CCDC58-201ENST00000291458 ST20-AS1Q8NBB2 130 aa5.62□□□□□ -1.51
CCDC58-201ENST00000291458 SPANXCQ9NY87 97 aa5.62□□□□□ -1.51
CCDC58-201ENST00000291458 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
CCDC58-201ENST00000291458 LPAP08519 4548 aa5.61□□□□□ -1.51
CCDC58-201ENST00000291458 S100A2P29034 98 aa5.6□□□□□ -1.51
CCDC58-201ENST00000291458 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
CCDC58-201ENST00000291458 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
CCDC58-201ENST00000291458 PCP2Q8IVA1 136 aa5.6□□□□□ -1.51
CCDC58-201ENST00000291458 HINT1P49773 126 aaPredicted RBP5.59□□□□□ -1.51
CCDC58-201ENST00000291458 SPANXDQ9BXN6 97 aa5.59□□□□□ -1.51
CCDC58-201ENST00000291458 HIST3H2BBQ8N257 126 aa5.58□□□□□ -1.52
CCDC58-201ENST00000291458 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
CCDC58-201ENST00000291458 COX7BP24311 80 aa5.57□□□□□ -1.52
CCDC58-201ENST00000291458 C6orf99Q4VX62 202 aa5.57□□□□□ -1.52
CCDC58-201ENST00000291458 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
CCDC58-201ENST00000291458 A6NDN8 102 aa5.56□□□□□ -1.52
CCDC58-201ENST00000291458 S100A6P06703 90 aa5.56□□□□□ -1.52
CCDC58-201ENST00000291458 S100A1P23297 94 aa5.56□□□□□ -1.52
CCDC58-201ENST00000291458 HRCT1Q6UXD1 115 aa5.56□□□□□ -1.52
CCDC58-201ENST00000291458 DEFB105AQ8NG35 78 aa5.56□□□□□ -1.52
CCDC58-201ENST00000291458 HIST1H2BLQ99880 126 aa5.56□□□□□ -1.52
CCDC58-201ENST00000291458 CBY1Q9Y3M2 126 aa5.56□□□□□ -1.52
CCDC58-201ENST00000291458 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
CCDC58-201ENST00000291458 MUSTN1Q8IVN3 82 aa5.55□□□□□ -1.52
CCDC58-201ENST00000291458 HSBP1L1C9JCN9 74 aa5.54□□□□□ -1.52
CCDC58-201ENST00000291458 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
CCDC58-201ENST00000291458 Q1RN00 199 aa5.54□□□□□ -1.52
CCDC58-201ENST00000291458 LINC00518Q8N0U6 118 aa5.54□□□□□ -1.52
CCDC58-201ENST00000291458 COPS9Q8WXC6 57 aa5.54□□□□□ -1.52
CCDC58-201ENST00000291458 DHRS4-AS1Q9P1J3 65 aa5.54□□□□□ -1.52
CCDC58-201ENST00000291458 SPINK1P00995 79 aa5.53□□□□□ -1.52
CCDC58-201ENST00000291458 IFITM1P13164 125 aa5.53□□□□□ -1.52
CCDC58-201ENST00000291458 ELOF1P60002 83 aaKnown RBP5.53□□□□□ -1.52
CCDC58-201ENST00000291458 SNRPEP62304 92 aaKnown RBP5.52□□□□□ -1.53
CCDC58-201ENST00000291458 TAL2Q16559 108 aa5.52□□□□□ -1.53
CCDC58-201ENST00000291458 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
CCDC58-201ENST00000291458 SCGB1D1O95968 90 aa5.51□□□□□ -1.53
CCDC58-201ENST00000291458 AKR1D1P51857 326 aa5.51□□□□□ -1.53
CCDC58-201ENST00000291458 FP248Q71RG6 208 aaPredicted RBP5.51□□□□□ -1.53
CCDC58-201ENST00000291458 Q8N377 158 aa5.51□□□□□ -1.53
CCDC58-201ENST00000291458 C12orf57Q99622 126 aa5.51□□□□□ -1.53
CCDC58-201ENST00000291458 CTAG1AP78358 180 aa5.5□□□□□ -1.53
CCDC58-201ENST00000291458 LAMTOR3Q9UHA4 124 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms