RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
SLC28A1-201ENST00000286749 Q5XG85 94 aa8.69□□□□□ -1.02
SLC28A1-201ENST00000286749 Q8N9L7 120 aa8.68□□□□□ -1.02
SLC28A1-201ENST00000286749 F8WEM9 126 aa8.67□□□□□ -1.02
SLC28A1-201ENST00000286749 SYCNQ0VAF6 134 aa8.67□□□□□ -1.02
SLC28A1-201ENST00000286749 OXLD1Q5BKU9 147 aa8.67□□□□□ -1.02
SLC28A1-201ENST00000286749 TENM3Q9P273 2699 aa8.66□□□□□ -1.02
SLC28A1-201ENST00000286749 NKAPP1Q8N9T2 125 aa8.66□□□□□ -1.02
SLC28A1-201ENST00000286749 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
SLC28A1-201ENST00000286749 SERTAD4-AS1Q5TG53 156 aa8.66□□□□□ -1.02
SLC28A1-201ENST00000286749 C3orf84H3BNL1 204 aa8.65□□□□□ -1.02
SLC28A1-201ENST00000286749 BPY2O14599 106 aa8.65□□□□□ -1.02
SLC28A1-201ENST00000286749 NREPQ16612 68 aa8.65□□□□□ -1.02
SLC28A1-201ENST00000286749 HRCT1Q6UXD1 115 aa8.65□□□□□ -1.03
SLC28A1-201ENST00000286749 C7orf33Q8WU49 177 aa8.65□□□□□ -1.03
SLC28A1-201ENST00000286749 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.03
SLC28A1-201ENST00000286749 KRTAP10-11P60412 298 aa8.64□□□□□ -1.03
SLC28A1-201ENST00000286749 KCNQ1DNQ9H478 68 aa8.64□□□□□ -1.03
SLC28A1-201ENST00000286749 IGKV4-1P06312 121 aa8.64□□□□□ -1.03
SLC28A1-201ENST00000286749 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
SLC28A1-201ENST00000286749 Q8N377 158 aa8.63□□□□□ -1.03
SLC28A1-201ENST00000286749 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
SLC28A1-201ENST00000286749 F8WDY8 70 aa8.62□□□□□ -1.03
SLC28A1-201ENST00000286749 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
SLC28A1-201ENST00000286749 RPL37AP8A6NKH3 93 aa8.6□□□□□ -1.03
SLC28A1-201ENST00000286749 TMEM254Q8TBM7 123 aa8.6□□□□□ -1.03
SLC28A1-201ENST00000286749 NDUFC1O43677 76 aa8.59□□□□□ -1.03
SLC28A1-201ENST00000286749 IGLV5-48A0A075B6I7 105 aa8.58□□□□□ -1.04
SLC28A1-201ENST00000286749 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
SLC28A1-201ENST00000286749 Q6ZRX8 168 aa8.57□□□□□ -1.04
SLC28A1-201ENST00000286749 C11orf45Q8TAV5 145 aa8.57□□□□□ -1.04
SLC28A1-201ENST00000286749 Q9BRP9 147 aa8.57□□□□□ -1.04
SLC28A1-201ENST00000286749 OCR1Q9BZK8 76 aa8.56□□□□□ -1.04
SLC28A1-201ENST00000286749 DHRS4-AS1Q9P1J3 65 aa8.56□□□□□ -1.04
SLC28A1-201ENST00000286749 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
SLC28A1-201ENST00000286749 DNAH10OSP0CZ25 163 aa8.56□□□□□ -1.04
SLC28A1-201ENST00000286749 KRTAP4-16G5E9R7 235 aaPredicted RBP8.55□□□□□ -1.04
SLC28A1-201ENST00000286749 TLX1NBP0CAT3 122 aa8.55□□□□□ -1.04
SLC28A1-201ENST00000286749 FUSP35637 526 aaKnown RBP eCLIP8.55□□□□□ -1.04
SLC28A1-201ENST00000286749 CASC10Q5T4H9 136 aa8.55□□□□□ -1.04
SLC28A1-201ENST00000286749 ST20-AS1Q8NBB2 130 aa8.55□□□□□ -1.04
SLC28A1-201ENST00000286749 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
SLC28A1-201ENST00000286749 A0A1W2PNM2 257 aa8.54□□□□□ -1.04
SLC28A1-201ENST00000286749 IGLV1-50A0A075B6I6 118 aa8.54□□□□□ -1.04
SLC28A1-201ENST00000286749 PRYO14603 147 aa8.54□□□□□ -1.04
SLC28A1-201ENST00000286749 PLA2G2DQ9UNK4 145 aa8.54□□□□□ -1.04
SLC28A1-201ENST00000286749 C1orf137Q5JT78 98 aa8.53□□□□□ -1.04
SLC28A1-201ENST00000286749 KRTAP7-1Q8IUC3 87 aa8.52□□□□□ -1.04
SLC28A1-201ENST00000286749 MRAPQ8TCY5 172 aa8.52□□□□□ -1.04
SLC28A1-201ENST00000286749 ANK2Q01484 3957 aa8.52□□□□□ -1.04
SLC28A1-201ENST00000286749 A0A0U1RQV1 116 aa8.52□□□□□ -1.05
SLC28A1-201ENST00000286749 ATP5EP56381 51 aaPredicted RBP8.52□□□□□ -1.05
SLC28A1-201ENST00000286749 FP248Q71RG6 208 aaPredicted RBP8.52□□□□□ -1.05
SLC28A1-201ENST00000286749 SMIM26A0A096LP01 95 aa8.51□□□□□ -1.05
SLC28A1-201ENST00000286749 SPRR1AP35321 89 aa8.51□□□□□ -1.05
SLC28A1-201ENST00000286749 TNP2Q05952 138 aa8.51□□□□□ -1.05
SLC28A1-201ENST00000286749 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
SLC28A1-201ENST00000286749 SMIM29Q86T20 159 aa8.5□□□□□ -1.05
SLC28A1-201ENST00000286749 LINC00588Q9Y4M8 146 aa8.5□□□□□ -1.05
SLC28A1-201ENST00000286749 Q8NBF4 154 aa8.5□□□□□ -1.05
SLC28A1-201ENST00000286749 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
SLC28A1-201ENST00000286749 FBN1P35555 2871 aaKnown RBP8.49□□□□□ -1.05
SLC28A1-201ENST00000286749 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
SLC28A1-201ENST00000286749 LINC00474Q9P2X8 69 aa8.49□□□□□ -1.05
SLC28A1-201ENST00000286749 STAB1Q9NY15 2570 aa8.49□□□□□ -1.05
SLC28A1-201ENST00000286749 A0A1B0GW54 56 aa8.48□□□□□ -1.05
SLC28A1-201ENST00000286749 MRPL55Q7Z7F7 128 aaKnown RBP8.48□□□□□ -1.05
SLC28A1-201ENST00000286749 UBE2BP63146 152 aa8.48□□□□□ -1.05
SLC28A1-201ENST00000286749 SPRR4Q96PI1 79 aa8.46□□□□□ -1.05
SLC28A1-201ENST00000286749 NOTCH1P46531 2555 aa8.45□□□□□ -1.06
SLC28A1-201ENST00000286749 DSCR10P59022 87 aa8.45□□□□□ -1.06
SLC28A1-201ENST00000286749 FAM229BQ4G0N7 80 aa8.44□□□□□ -1.06
SLC28A1-201ENST00000286749 LINC00336Q6ZUF6 198 aa8.44□□□□□ -1.06
SLC28A1-201ENST00000286749 K7EQZ3 153 aa8.43□□□□□ -1.06
SLC28A1-201ENST00000286749 REG3GQ6UW15 175 aa8.43□□□□□ -1.06
SLC28A1-201ENST00000286749 A0A0G2JQZ4 141 aa8.42□□□□□ -1.06
SLC28A1-201ENST00000286749 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
SLC28A1-201ENST00000286749 CMYA5Q8N3K9 4069 aa8.42□□□□□ -1.06
SLC28A1-201ENST00000286749 KRTAP24-1Q3LI83 254 aa8.42□□□□□ -1.06
SLC28A1-201ENST00000286749 LINC00476Q8WZB0 136 aa8.41□□□□□ -1.06
SLC28A1-201ENST00000286749 COL6A5A8TX70 2615 aa8.41□□□□□ -1.06
SLC28A1-201ENST00000286749 LCE6AA0A183 80 aa8.4□□□□□ -1.07
SLC28A1-201ENST00000286749 PRB2P02812 416 aaPredicted RBP8.4□□□□□ -1.07
SLC28A1-201ENST00000286749 MPLKIPQ8TAP9 179 aa8.38□□□□□ -1.07
SLC28A1-201ENST00000286749 PRLHP81277 87 aa8.37□□□□□ -1.07
SLC28A1-201ENST00000286749 IGFL1Q6UW32 110 aa8.37□□□□□ -1.07
SLC28A1-201ENST00000286749 DNAH1Q9P2D7 4330 aa8.37□□□□□ -1.07
SLC28A1-201ENST00000286749 PRO0628Q9UI54 55 aa8.37□□□□□ -1.07
SLC28A1-201ENST00000286749 IGKV2-24A0A0C4DH68 120 aa8.36□□□□□ -1.07
SLC28A1-201ENST00000286749 DEFB116Q30KQ4 102 aa8.36□□□□□ -1.07
SLC28A1-201ENST00000286749 DNAH3Q8TD57 4116 aa8.36□□□□□ -1.07
SLC28A1-201ENST00000286749 A0A096LNI7 61 aa8.36□□□□□ -1.07
SLC28A1-201ENST00000286749 PSCAO43653 123 aa8.36□□□□□ -1.07
SLC28A1-201ENST00000286749 HCG22E2RYF7 251 aa8.35□□□□□ -1.07
SLC28A1-201ENST00000286749 NBEAL1Q6ZS30 2694 aa8.35□□□□□ -1.07
SLC28A1-201ENST00000286749 ZCCHC13Q8WW36 166 aaKnown RBP8.34□□□□□ -1.07
SLC28A1-201ENST00000286749 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.33□□□□□ -1.08
SLC28A1-201ENST00000286749 A0A087WSZ3 146 aa8.32□□□□□ -1.08
SLC28A1-201ENST00000286749 KRTAP1-5Q9BYS1 174 aa8.32□□□□□ -1.08
SLC28A1-201ENST00000286749 C16orf90A8MZG2 172 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms