RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
SMARCA5-201ENST00000283131 ZNF861PO60384 105 aa8.86□□□□□ -0.99
SMARCA5-201ENST00000283131 DNAH10OSP0CZ25 163 aa8.86□□□□□ -0.99
SMARCA5-201ENST00000283131 LINC00336Q6ZUF6 198 aa8.85□□□□□ -0.99
SMARCA5-201ENST00000283131 SPTBN4Q9H254 2564 aa8.85□□□□□ -0.99
SMARCA5-201ENST00000283131 IGFL1Q6UW32 110 aa8.84□□□□□ -0.99
SMARCA5-201ENST00000283131 WDR87Q6ZQQ6 2873 aa8.83□□□□□ -1
SMARCA5-201ENST00000283131 Q8N1X5 172 aa8.81□□□□□ -1
SMARCA5-201ENST00000283131 USP24Q9UPU5 2620 aa8.8□□□□□ -1
SMARCA5-201ENST00000283131 IGLV1-50A0A075B6I6 118 aa8.8□□□□□ -1
SMARCA5-201ENST00000283131 Q6ZSA8 131 aa8.8□□□□□ -1
SMARCA5-201ENST00000283131 SMR3BP02814 79 aaPredicted RBP8.79□□□□□ -1
SMARCA5-201ENST00000283131 KCNQ1DNQ9H478 68 aa8.79□□□□□ -1
SMARCA5-201ENST00000283131 Q8NAQ8 132 aa8.78□□□□□ -1
SMARCA5-201ENST00000283131 PRO0461Q9UI25 63 aa8.77□□□□□ -1
SMARCA5-201ENST00000283131 KLKP1Q107X0 134 aa8.77□□□□□ -1.01
SMARCA5-201ENST00000283131 TLX1NBP0CAT3 122 aa8.76□□□□□ -1.01
SMARCA5-201ENST00000283131 HRES1P13985 223 aa8.75□□□□□ -1.01
SMARCA5-201ENST00000283131 SPANXA2-OT1Q8N9U9 137 aa8.74□□□□□ -1.01
SMARCA5-201ENST00000283131 A0A1W2PPR1 153 aa8.73□□□□□ -1.01
SMARCA5-201ENST00000283131 CHD8Q9HCK8 2581 aa8.73□□□□□ -1.01
SMARCA5-201ENST00000283131 USP9YO00507 2555 aaPredicted RBP8.73□□□□□ -1.01
SMARCA5-201ENST00000283131 PCSK5Q92824 1860 aa8.73□□□□□ -1.01
SMARCA5-201ENST00000283131 KRTAP24-1Q3LI83 254 aa8.72□□□□□ -1.01
SMARCA5-201ENST00000283131 WIPF1O43516 503 aa8.71□□□□□ -1.01
SMARCA5-201ENST00000283131 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.01
SMARCA5-201ENST00000283131 PLA2G2DQ9UNK4 145 aa8.71□□□□□ -1.02
SMARCA5-201ENST00000283131 A0A1B0GU33 70 aa8.7□□□□□ -1.02
SMARCA5-201ENST00000283131 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
SMARCA5-201ENST00000283131 C15orf56Q8N910 161 aa8.69□□□□□ -1.02
SMARCA5-201ENST00000283131 Q8N377 158 aa8.69□□□□□ -1.02
SMARCA5-201ENST00000283131 MUC22E2RYF6 1773 aaPredicted RBP8.68□□□□□ -1.02
SMARCA5-201ENST00000283131 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
SMARCA5-201ENST00000283131 ANAPC11Q9NYG5 84 aa8.67□□□□□ -1.02
SMARCA5-201ENST00000283131 A0A087WTM6 91 aa8.66□□□□□ -1.02
SMARCA5-201ENST00000283131 SRCAPQ6ZRS2 3230 aa8.65□□□□□ -1.02
SMARCA5-201ENST00000283131 H7BZZ5 65 aa8.65□□□□□ -1.02
SMARCA5-201ENST00000283131 EPG5Q9HCE0 2579 aa8.64□□□□□ -1.03
SMARCA5-201ENST00000283131 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
SMARCA5-201ENST00000283131 PSORS1C2Q9UIG4 136 aa8.62□□□□□ -1.03
SMARCA5-201ENST00000283131 A0A0G2JQZ4 141 aa8.61□□□□□ -1.03
SMARCA5-201ENST00000283131 A0A1W2PNN7 141 aa8.61□□□□□ -1.03
SMARCA5-201ENST00000283131 FASNP49327 2511 aaKnown RBP8.61□□□□□ -1.03
SMARCA5-201ENST00000283131 DMAC1Q96GE9 116 aa8.6□□□□□ -1.03
SMARCA5-201ENST00000283131 ANKRD11Q6UB99 2663 aaPredicted RBP8.6□□□□□ -1.03
SMARCA5-201ENST00000283131 IGLV7-46A0A075B6I9 117 aa8.6□□□□□ -1.03
SMARCA5-201ENST00000283131 SPINK7P58062 85 aa8.6□□□□□ -1.03
SMARCA5-201ENST00000283131 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
SMARCA5-201ENST00000283131 BPTFQ12830 3046 aa8.59□□□□□ -1.03
SMARCA5-201ENST00000283131 H3BS24 57 aa8.58□□□□□ -1.04
SMARCA5-201ENST00000283131 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
SMARCA5-201ENST00000283131 LITAFQ99732 161 aa8.58□□□□□ -1.04
SMARCA5-201ENST00000283131 S4R3F8 94 aa8.55□□□□□ -1.04
SMARCA5-201ENST00000283131 R4GN34 69 aa8.53□□□□□ -1.04
SMARCA5-201ENST00000283131 K7EIL1 84 aa8.52□□□□□ -1.05
SMARCA5-201ENST00000283131 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.05
SMARCA5-201ENST00000283131 PRR34Q9NV39 138 aa8.52□□□□□ -1.05
SMARCA5-201ENST00000283131 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
SMARCA5-201ENST00000283131 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
SMARCA5-201ENST00000283131 Q75L30 129 aa8.46□□□□□ -1.05
SMARCA5-201ENST00000283131 GOLGB1Q14789 3259 aaKnown RBP8.46□□□□□ -1.06
SMARCA5-201ENST00000283131 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.45□□□□□ -1.06
SMARCA5-201ENST00000283131 KRTAP10-11P60412 298 aa8.44□□□□□ -1.06
SMARCA5-201ENST00000283131 CNBPP62633 177 aaKnown RBP8.44□□□□□ -1.06
SMARCA5-201ENST00000283131 A0A1W2PNM2 257 aa8.44□□□□□ -1.06
SMARCA5-201ENST00000283131 C19orf73Q9NVV2 129 aa8.4□□□□□ -1.06
SMARCA5-201ENST00000283131 MGAM2Q2M2H8 2515 aa8.38□□□□□ -1.07
SMARCA5-201ENST00000283131 EP400Q96L91 3159 aa8.37□□□□□ -1.07
SMARCA5-201ENST00000283131 ZCCHC13Q8WW36 166 aaKnown RBP8.37□□□□□ -1.07
SMARCA5-201ENST00000283131 COL4A2P08572 1712 aa8.37□□□□□ -1.07
SMARCA5-201ENST00000283131 SEC61BP60468 96 aaKnown RBP8.36□□□□□ -1.07
SMARCA5-201ENST00000283131 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
SMARCA5-201ENST00000283131 EIF4EBP3O60516 100 aaPredicted RBP8.35□□□□□ -1.07
SMARCA5-201ENST00000283131 OCR1Q9BZK8 76 aa8.35□□□□□ -1.07
SMARCA5-201ENST00000283131 PRAC1Q96KF2 57 aa8.34□□□□□ -1.07
SMARCA5-201ENST00000283131 ROMO1P60602 79 aa8.34□□□□□ -1.07
SMARCA5-201ENST00000283131 TNP2Q05952 138 aa8.33□□□□□ -1.08
SMARCA5-201ENST00000283131 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
SMARCA5-201ENST00000283131 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
SMARCA5-201ENST00000283131 HECTD1Q9ULT8 2610 aa8.31□□□□□ -1.08
SMARCA5-201ENST00000283131 RPL37P61927 97 aaKnown RBP8.31□□□□□ -1.08
SMARCA5-201ENST00000283131 C10orf142B7Z368 130 aa8.31□□□□□ -1.08
SMARCA5-201ENST00000283131 GIG44P09565 113 aaPredicted RBP8.3□□□□□ -1.08
SMARCA5-201ENST00000283131 CENPFP49454 3210 aa8.28□□□□□ -1.08
SMARCA5-201ENST00000283131 CASC10Q5T4H9 136 aa8.28□□□□□ -1.08
SMARCA5-201ENST00000283131 M0QZ58 72 aa8.28□□□□□ -1.08
SMARCA5-201ENST00000283131 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
SMARCA5-201ENST00000283131 MAST4O15021 2626 aa8.25□□□□□ -1.09
SMARCA5-201ENST00000283131 ATRQ13535 2644 aa8.25□□□□□ -1.09
SMARCA5-201ENST00000283131 KRTAP16-1A8MUX0 517 aa8.24□□□□□ -1.09
SMARCA5-201ENST00000283131 KLK9Q2XQG4 91 aa8.2□□□□□ -1.1
SMARCA5-201ENST00000283131 STAB1Q9NY15 2570 aa8.2□□□□□ -1.1
SMARCA5-201ENST00000283131 CEP295Q9C0D2 2601 aa8.19□□□□□ -1.1
SMARCA5-201ENST00000283131 Q5W150 140 aa8.18□□□□□ -1.1
SMARCA5-201ENST00000283131 UTRNP46939 3433 aa8.17□□□□□ -1.1
SMARCA5-201ENST00000283131 Q5VSD8 79 aa8.15□□□□□ -1.1
SMARCA5-201ENST00000283131 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.11
SMARCA5-201ENST00000283131 C20orf166-AS1Q96NR2 134 aa8.14□□□□□ -1.11
SMARCA5-201ENST00000283131 CFAP46Q8IYW2 2715 aa8.14□□□□□ -1.11
SMARCA5-201ENST00000283131 Q5VV11 94 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms