RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ELOF1P60002 83 aaKnown RBP11.07□□□□□ -0.64
SQLE-201ENST00000265896 KRTAP10-11P60412 298 aa11.07□□□□□ -0.64
SQLE-201ENST00000265896 COL7A1Q02388 2944 aa11.06□□□□□ -0.64
SQLE-201ENST00000265896 C1orf43Q9BWL3 253 aa11.06□□□□□ -0.64
SQLE-201ENST00000265896 A0A0G2JQZ4 141 aa11.05□□□□□ -0.64
SQLE-201ENST00000265896 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
SQLE-201ENST00000265896 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
SQLE-201ENST00000265896 STAB2Q8WWQ8 2551 aa11.04□□□□□ -0.64
SQLE-201ENST00000265896 F8WEM9 126 aa11.03□□□□□ -0.64
SQLE-201ENST00000265896 NDUFC2-KCTD14E9PQ53 114 aa11.03□□□□□ -0.64
SQLE-201ENST00000265896 KRTAP26-1Q6PEX3 210 aa11.02□□□□□ -0.64
SQLE-201ENST00000265896 TRBV7-4A0A0J9YYF1 115 aa11.02□□□□□ -0.65
SQLE-201ENST00000265896 H7BZZ5 65 aa11.02□□□□□ -0.65
SQLE-201ENST00000265896 M0R378 163 aa11.01□□□□□ -0.65
SQLE-201ENST00000265896 DNAH10Q8IVF4 4471 aa11.01□□□□□ -0.65
SQLE-201ENST00000265896 FAM236DA0A1B0GTK5 79 aa11.01□□□□□ -0.65
SQLE-201ENST00000265896 FAM236CP0DP71 79 aa11.01□□□□□ -0.65
SQLE-201ENST00000265896 ST20-AS1Q8NBB2 130 aa11.01□□□□□ -0.65
SQLE-201ENST00000265896 GVQW2A0A096LPI5 108 aaPredicted RBP11□□□□□ -0.65
SQLE-201ENST00000265896 LINC00528Q8N1L1 170 aa11□□□□□ -0.65
SQLE-201ENST00000265896 NKAPP1Q8N9T2 125 aa11□□□□□ -0.65
SQLE-201ENST00000265896 DEFB131BA0A096LNP1 70 aa10.99□□□□□ -0.65
SQLE-201ENST00000265896 EGFEM1PQ0D2K5 195 aa10.99□□□□□ -0.65
SQLE-201ENST00000265896 TRAV7A0A075B6U4 112 aa10.99□□□□□ -0.65
SQLE-201ENST00000265896 MRAPQ8TCY5 172 aa10.99□□□□□ -0.65
SQLE-201ENST00000265896 SYCNQ0VAF6 134 aa10.98□□□□□ -0.65
SQLE-201ENST00000265896 C7orf33Q8WU49 177 aa10.98□□□□□ -0.65
SQLE-201ENST00000265896 NREPQ16612 68 aa10.97□□□□□ -0.65
SQLE-201ENST00000265896 Q5XG85 94 aa10.96□□□□□ -0.65
SQLE-201ENST00000265896 RPS28P62857 69 aaKnown RBP10.96□□□□□ -0.66
SQLE-201ENST00000265896 Q8N377 158 aa10.94□□□□□ -0.66
SQLE-201ENST00000265896 CXCL6P80162 114 aa10.93□□□□□ -0.66
SQLE-201ENST00000265896 DEFB116Q30KQ4 102 aa10.93□□□□□ -0.66
SQLE-201ENST00000265896 C11orf45Q8TAV5 145 aa10.93□□□□□ -0.66
SQLE-201ENST00000265896 LINC00474Q9P2X8 69 aa10.93□□□□□ -0.66
SQLE-201ENST00000265896 ERC2-IT1O76042 136 aa10.91□□□□□ -0.66
SQLE-201ENST00000265896 PDE6GP18545 87 aa10.91□□□□□ -0.66
SQLE-201ENST00000265896 FAM30AQ9NZY2 134 aa10.91□□□□□ -0.66
SQLE-201ENST00000265896 C5orf47Q569G3 176 aa10.9□□□□□ -0.66
SQLE-201ENST00000265896 Q9BRP9 147 aa10.89□□□□□ -0.67
SQLE-201ENST00000265896 IGKV4-1P06312 121 aa10.89□□□□□ -0.67
SQLE-201ENST00000265896 HIGD2AQ9BW72 106 aa10.88□□□□□ -0.67
SQLE-201ENST00000265896 CMYA5Q8N3K9 4069 aa10.87□□□□□ -0.67
SQLE-201ENST00000265896 IGKV2-24A0A0C4DH68 120 aa10.87□□□□□ -0.67
SQLE-201ENST00000265896 TMEM254Q8TBM7 123 aa10.87□□□□□ -0.67
SQLE-201ENST00000265896 UBE2BP63146 152 aa10.86□□□□□ -0.67
SQLE-201ENST00000265896 TRBV7-6A0A0J9YX20 115 aa10.86□□□□□ -0.67
SQLE-201ENST00000265896 LRCOL1A6NCL2 159 aa10.86□□□□□ -0.67
SQLE-201ENST00000265896 KLKP1Q107X0 134 aa10.86□□□□□ -0.67
SQLE-201ENST00000265896 ETDCA0A1B0GVM5 59 aa10.85□□□□□ -0.67
SQLE-201ENST00000265896 KRTAP7-1Q8IUC3 87 aa10.85□□□□□ -0.67
SQLE-201ENST00000265896 A0A1W2PNM2 257 aa10.84□□□□□ -0.67
SQLE-201ENST00000265896 SMIM29Q86T20 159 aa10.84□□□□□ -0.67
SQLE-201ENST00000265896 MPLKIPQ8TAP9 179 aa10.84□□□□□ -0.67
SQLE-201ENST00000265896 LINC01556Q5JQF7 62 aa10.84□□□□□ -0.67
SQLE-201ENST00000265896 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.68
SQLE-201ENST00000265896 PRR4Q16378 134 aa10.83□□□□□ -0.68
SQLE-201ENST00000265896 FAM229BQ4G0N7 80 aa10.82□□□□□ -0.68
SQLE-201ENST00000265896 C1orf137Q5JT78 98 aa10.82□□□□□ -0.68
SQLE-201ENST00000265896 KCNQ1DNQ9H478 68 aa10.82□□□□□ -0.68
SQLE-201ENST00000265896 PRLHP81277 87 aa10.8□□□□□ -0.68
SQLE-201ENST00000265896 Q6ZRX8 168 aa10.8□□□□□ -0.68
SQLE-201ENST00000265896 FP248Q71RG6 208 aaPredicted RBP10.8□□□□□ -0.68
SQLE-201ENST00000265896 KRTAP24-1Q3LI83 254 aa10.8□□□□□ -0.68
SQLE-201ENST00000265896 SERP1Q9Y6X1 66 aa10.79□□□□□ -0.68
SQLE-201ENST00000265896 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.78□□□□□ -0.68
SQLE-201ENST00000265896 FUSP35637 526 aaKnown RBP eCLIP10.78□□□□□ -0.68
SQLE-201ENST00000265896 LINC00336Q6ZUF6 198 aa10.78□□□□□ -0.68
SQLE-201ENST00000265896 A0A096LNI7 61 aa10.77□□□□□ -0.69
SQLE-201ENST00000265896 IGLV1-50A0A075B6I6 118 aa10.76□□□□□ -0.69
SQLE-201ENST00000265896 K7EQZ3 153 aa10.76□□□□□ -0.69
SQLE-201ENST00000265896 OCR1Q9BZK8 76 aa10.76□□□□□ -0.69
SQLE-201ENST00000265896 H3BQ85 93 aa10.76□□□□□ -0.69
SQLE-201ENST00000265896 DNAH9Q9NYC9 4486 aa10.75□□□□□ -0.69
SQLE-201ENST00000265896 H3BNG1 76 aa10.74□□□□□ -0.69
SQLE-201ENST00000265896 MRPL55Q7Z7F7 128 aaKnown RBP10.74□□□□□ -0.69
SQLE-201ENST00000265896 HUWE1Q7Z6Z7 4374 aaKnown RBP10.74□□□□□ -0.69
SQLE-201ENST00000265896 EPM2AB3EWF7 344 aa10.74□□□□□ -0.69
SQLE-201ENST00000265896 PRYO14603 147 aa10.73□□□□□ -0.69
SQLE-201ENST00000265896 IGLV5-48A0A075B6I7 105 aa10.72□□□□□ -0.69
SQLE-201ENST00000265896 DNAH10OSP0CZ25 163 aa10.72□□□□□ -0.69
SQLE-201ENST00000265896 WIPF1O43516 503 aa10.71□□□□□ -0.69
SQLE-201ENST00000265896 CHTF8P0CG12 524 aa10.71□□□□□ -0.69
SQLE-201ENST00000265896 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.69
SQLE-201ENST00000265896 WFDC13Q8IUB5 93 aa10.71□□□□□ -0.69
SQLE-201ENST00000265896 KRTAP4-16G5E9R7 235 aaPredicted RBP10.71□□□□□ -0.69
SQLE-201ENST00000265896 DNAH7Q8WXX0 4024 aa10.7□□□□□ -0.7
SQLE-201ENST00000265896 DHRS4-AS1Q9P1J3 65 aa10.7□□□□□ -0.7
SQLE-201ENST00000265896 DNAH1Q9P2D7 4330 aa10.69□□□□□ -0.7
SQLE-201ENST00000265896 DSCR10P59022 87 aa10.69□□□□□ -0.7
SQLE-201ENST00000265896 BCE1O60756 84 aa10.68□□□□□ -0.7
SQLE-201ENST00000265896 LINC00476Q8WZB0 136 aa10.68□□□□□ -0.7
SQLE-201ENST00000265896 A0A0U1RQV1 116 aa10.68□□□□□ -0.7
SQLE-201ENST00000265896 Q8NBF4 154 aa10.68□□□□□ -0.7
SQLE-201ENST00000265896 KRTAP1-5Q9BYS1 174 aa10.68□□□□□ -0.7
SQLE-201ENST00000265896 A0A087WSZ3 146 aa10.66□□□□□ -0.7
SQLE-201ENST00000265896 REG3GQ6UW15 175 aa10.65□□□□□ -0.7
SQLE-201ENST00000265896 SMIM26A0A096LP01 95 aa10.65□□□□□ -0.71
SQLE-201ENST00000265896 BRK1Q8WUW1 75 aa10.65□□□□□ -0.71
SQLE-201ENST00000265896 TNP2Q05952 138 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms