RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
CDH3-201ENST00000264012 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
CDH3-201ENST00000264012 C4orf26Q17RF5 130 aa9.29□□□□□ -0.92
CDH3-201ENST00000264012 C15orf56Q8N910 161 aa9.29□□□□□ -0.92
CDH3-201ENST00000264012 KCNQ1DNQ9H478 68 aa9.27□□□□□ -0.93
CDH3-201ENST00000264012 UNC80Q8N2C7 3258 aa9.27□□□□□ -0.93
CDH3-201ENST00000264012 PSPHP1O15172 72 aa9.27□□□□□ -0.93
CDH3-201ENST00000264012 IGLV1-50A0A075B6I6 118 aa9.27□□□□□ -0.93
CDH3-201ENST00000264012 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
CDH3-201ENST00000264012 ZNF575Q86XF7 245 aa9.25□□□□□ -0.93
CDH3-201ENST00000264012 SPINK1P00995 79 aa9.25□□□□□ -0.93
CDH3-201ENST00000264012 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
CDH3-201ENST00000264012 IGKV2-30P06310 120 aa9.24□□□□□ -0.93
CDH3-201ENST00000264012 TP53AIP1Q9HCN2 124 aa9.24□□□□□ -0.93
CDH3-201ENST00000264012 AKAP13Q12802 2813 aa9.23□□□□□ -0.93
CDH3-201ENST00000264012 TRBV7-4A0A0J9YYF1 115 aa9.23□□□□□ -0.93
CDH3-201ENST00000264012 LINC01600Q96MT4 127 aa9.23□□□□□ -0.93
CDH3-201ENST00000264012 TM2D3Q9BRN9 247 aa9.23□□□□□ -0.93
CDH3-201ENST00000264012 TEP1Q99973 2627 aaKnown RBP9.22□□□□□ -0.93
CDH3-201ENST00000264012 DSPP15924 2871 aaKnown RBP9.21□□□□□ -0.93
CDH3-201ENST00000264012 C9orf129Q5T035 196 aaKnown RBP9.21□□□□□ -0.94
CDH3-201ENST00000264012 ERC2-IT1O76042 136 aa9.21□□□□□ -0.94
CDH3-201ENST00000264012 J3QL48 77 aa9.2□□□□□ -0.94
CDH3-201ENST00000264012 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
CDH3-201ENST00000264012 TRIOO75962 3097 aa9.19□□□□□ -0.94
CDH3-201ENST00000264012 CHD6Q8TD26 2715 aa9.18□□□□□ -0.94
CDH3-201ENST00000264012 TYMSOSQ8TAI1 123 aa9.18□□□□□ -0.94
CDH3-201ENST00000264012 XIRP2A4UGR9 3374 aa9.18□□□□□ -0.94
CDH3-201ENST00000264012 MAP1AP78559 2803 aaPredicted RBP9.17□□□□□ -0.94
CDH3-201ENST00000264012 PLA2G1BP04054 148 aaKnown RBP9.17□□□□□ -0.94
CDH3-201ENST00000264012 H3BPC8 53 aa9.16□□□□□ -0.94
CDH3-201ENST00000264012 TLX1NBP0CAT3 122 aa9.16□□□□□ -0.94
CDH3-201ENST00000264012 KLKP1Q107X0 134 aa9.15□□□□□ -0.94
CDH3-201ENST00000264012 TRAV22A0A0B4J277 110 aa9.15□□□□□ -0.94
CDH3-201ENST00000264012 C9orf163Q8N9P6 203 aa9.14□□□□□ -0.95
CDH3-201ENST00000264012 LINC00313P59037 77 aa9.14□□□□□ -0.95
CDH3-201ENST00000264012 TEX15Q9BXT5 2789 aa9.14□□□□□ -0.95
CDH3-201ENST00000264012 CASC10Q5T4H9 136 aa9.13□□□□□ -0.95
CDH3-201ENST00000264012 Q8N377 158 aa9.13□□□□□ -0.95
CDH3-201ENST00000264012 K7EQZ3 153 aa9.13□□□□□ -0.95
CDH3-201ENST00000264012 A0A087WTM6 91 aa9.13□□□□□ -0.95
CDH3-201ENST00000264012 IGFL1Q6UW32 110 aa9.12□□□□□ -0.95
CDH3-201ENST00000264012 A8MWP4 228 aa9.12□□□□□ -0.95
CDH3-201ENST00000264012 PLA2G2DQ9UNK4 145 aa9.12□□□□□ -0.95
CDH3-201ENST00000264012 VPS13AQ96RL7 3174 aa9.12□□□□□ -0.95
CDH3-201ENST00000264012 STAB1Q9NY15 2570 aa9.11□□□□□ -0.95
CDH3-201ENST00000264012 C7orf65Q6ZTY9 151 aa9.1□□□□□ -0.95
CDH3-201ENST00000264012 APLNQ9ULZ1 77 aa9.1□□□□□ -0.95
CDH3-201ENST00000264012 ZNF861PO60384 105 aa9.08□□□□□ -0.96
CDH3-201ENST00000264012 ACYP2P14621 99 aa9.08□□□□□ -0.96
CDH3-201ENST00000264012 CDH23Q9H251 3354 aa9.07□□□□□ -0.96
CDH3-201ENST00000264012 IGSF10Q6WRI0 2623 aa9.07□□□□□ -0.96
CDH3-201ENST00000264012 COL6A5A8TX70 2615 aa9.07□□□□□ -0.96
CDH3-201ENST00000264012 UNC79Q9P2D8 2635 aa9.07□□□□□ -0.96
CDH3-201ENST00000264012 SETXQ7Z333 2677 aaKnown RBP9.07□□□□□ -0.96
CDH3-201ENST00000264012 A0A1W2PNN7 141 aa9.07□□□□□ -0.96
CDH3-201ENST00000264012 A0A0G2JQZ4 141 aa9.06□□□□□ -0.96
CDH3-201ENST00000264012 H7BZZ5 65 aa9.06□□□□□ -0.96
CDH3-201ENST00000264012 CNBPP62633 177 aaKnown RBP9.05□□□□□ -0.96
CDH3-201ENST00000264012 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
CDH3-201ENST00000264012 CR1P17927 2039 aa9.05□□□□□ -0.96
CDH3-201ENST00000264012 MRPL34Q9BQ48 92 aaKnown RBP9.04□□□□□ -0.96
CDH3-201ENST00000264012 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
CDH3-201ENST00000264012 OBSCN-AS1Q96MR7 158 aa9.03□□□□□ -0.96
CDH3-201ENST00000264012 Q96NJ1 140 aa9.03□□□□□ -0.96
CDH3-201ENST00000264012 WIPF1O43516 503 aa9.02□□□□□ -0.97
CDH3-201ENST00000264012 PRR15Q8IV56 129 aa9.02□□□□□ -0.97
CDH3-201ENST00000264012 NOTCH1P46531 2555 aa9.02□□□□□ -0.97
CDH3-201ENST00000264012 SSBP3-AS1Q7Z2R9 100 aa9.01□□□□□ -0.97
CDH3-201ENST00000264012 A0A1B0GU69 56 aa9.01□□□□□ -0.97
CDH3-201ENST00000264012 LOC101927531A0A1B0GV80 90 aa9.01□□□□□ -0.97
CDH3-201ENST00000264012 SPAG11AQ6PDA7 123 aa9.01□□□□□ -0.97
CDH3-201ENST00000264012 GCN1Q92616 2671 aaKnown RBP9□□□□□ -0.97
CDH3-201ENST00000264012 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
CDH3-201ENST00000264012 ANAPC11Q9NYG5 84 aa8.99□□□□□ -0.97
CDH3-201ENST00000264012 PSORS1C2Q9UIG4 136 aa8.99□□□□□ -0.97
CDH3-201ENST00000264012 C8orf17Q9NRJ1 99 aa8.98□□□□□ -0.97
CDH3-201ENST00000264012 LINC00336Q6ZUF6 198 aa8.98□□□□□ -0.97
CDH3-201ENST00000264012 A0A1W2PNM2 257 aa8.97□□□□□ -0.97
CDH3-201ENST00000264012 FRYQ5TBA9 3013 aa8.96□□□□□ -0.97
CDH3-201ENST00000264012 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.97
CDH3-201ENST00000264012 IGLV7-43P04211 117 aa8.96□□□□□ -0.98
CDH3-201ENST00000264012 CYP4F30PQ9H0H9 118 aa8.95□□□□□ -0.98
CDH3-201ENST00000264012 A0A1B0GVX0 72 aa8.95□□□□□ -0.98
CDH3-201ENST00000264012 COX6B2Q6YFQ2 88 aa8.95□□□□□ -0.98
CDH3-201ENST00000264012 SPRR4Q96PI1 79 aa8.95□□□□□ -0.98
CDH3-201ENST00000264012 DSCR10P59022 87 aa8.94□□□□□ -0.98
CDH3-201ENST00000264012 SMR3BP02814 79 aaPredicted RBP8.93□□□□□ -0.98
CDH3-201ENST00000264012 LINC00304Q8N9R0 145 aa8.93□□□□□ -0.98
CDH3-201ENST00000264012 UBR5O95071 2799 aaPredicted RBP8.93□□□□□ -0.98
CDH3-201ENST00000264012 IGLV5-48A0A075B6I7 105 aa8.92□□□□□ -0.98
CDH3-201ENST00000264012 A8MUN3 132 aa8.91□□□□□ -0.98
CDH3-201ENST00000264012 NBEAL1Q6ZS30 2694 aa8.9□□□□□ -0.99
CDH3-201ENST00000264012 SZT2Q5T011 3432 aa8.89□□□□□ -0.99
CDH3-201ENST00000264012 COA5Q86WW8 74 aa8.87□□□□□ -0.99
CDH3-201ENST00000264012 FLNCQ14315 2725 aa8.87□□□□□ -0.99
CDH3-201ENST00000264012 TNP2Q05952 138 aa8.86□□□□□ -0.99
CDH3-201ENST00000264012 LAMA1P25391 3075 aa8.85□□□□□ -0.99
CDH3-201ENST00000264012 NBEAL2Q6ZNJ1 2754 aa8.85□□□□□ -0.99
CDH3-201ENST00000264012 CELSR3Q9NYQ7 3312 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms