RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 A0A087WYN8 130 aa11.63□□□□□ -0.55
SDF4-201ENST00000263741 GAGE2EQ4V326 116 aa11.63□□□□□ -0.55
SDF4-201ENST00000263741 GAGE2DQ9UEU5 116 aa11.63□□□□□ -0.55
SDF4-201ENST00000263741 A0A0U1RRA0 63 aa11.61□□□□□ -0.55
SDF4-201ENST00000263741 FAM240AA0A1B0GVK7 77 aa11.61□□□□□ -0.55
SDF4-201ENST00000263741 TLX1NBP0CAT3 122 aa11.6□□□□□ -0.55
SDF4-201ENST00000263741 PKIGQ9Y2B9 76 aa11.6□□□□□ -0.55
SDF4-201ENST00000263741 NDUFC2-KCTD14E9PQ53 114 aa11.59□□□□□ -0.55
SDF4-201ENST00000263741 TRAV13-2A0A0B4J235 113 aa11.58□□□□□ -0.56
SDF4-201ENST00000263741 FAM168BA1KXE4 195 aa11.58□□□□□ -0.56
SDF4-201ENST00000263741 SOSTDC1Q6X4U4 206 aa11.58□□□□□ -0.56
SDF4-201ENST00000263741 XAGE1AQ9HD64 81 aa11.58□□□□□ -0.56
SDF4-201ENST00000263741 A0A1W2PNN7 141 aa11.57□□□□□ -0.56
SDF4-201ENST00000263741 PFN2P35080 140 aa11.57□□□□□ -0.56
SDF4-201ENST00000263741 ANAPC13Q9BS18 74 aa11.57□□□□□ -0.56
SDF4-201ENST00000263741 LINC00474Q9P2X8 69 aa11.57□□□□□ -0.56
SDF4-201ENST00000263741 TRACP01848 142 aa11.56□□□□□ -0.56
SDF4-201ENST00000263741 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
SDF4-201ENST00000263741 Q6Q795 121 aa11.56□□□□□ -0.56
SDF4-201ENST00000263741 PLAC8Q9NZF1 115 aa11.56□□□□□ -0.56
SDF4-201ENST00000263741 LINC00528Q8N1L1 170 aa11.56□□□□□ -0.56
SDF4-201ENST00000263741 KRTAP4-5Q9BYR2 181 aa11.56□□□□□ -0.56
SDF4-201ENST00000263741 Q8N1X5 172 aa11.55□□□□□ -0.56
SDF4-201ENST00000263741 ACYP1P07311 99 aa11.53□□□□□ -0.56
SDF4-201ENST00000263741 Q5VSD8 79 aa11.53□□□□□ -0.56
SDF4-201ENST00000263741 FAM19A5Q7Z5A7 132 aaPredicted RBP11.53□□□□□ -0.56
SDF4-201ENST00000263741 KRTAP7-1Q8IUC3 87 aa11.52□□□□□ -0.57
SDF4-201ENST00000263741 MIR7-3HGQ8N6C7 128 aa11.51□□□□□ -0.57
SDF4-201ENST00000263741 SRRM2Q9UQ35 2752 aaKnown RBP11.51□□□□□ -0.57
SDF4-201ENST00000263741 LINC00158P58513 81 aa11.5□□□□□ -0.57
SDF4-201ENST00000263741 SND1-IT1Q9HBX3 110 aa11.5□□□□□ -0.57
SDF4-201ENST00000263741 RPL28P46779 137 aaKnown RBP11.5□□□□□ -0.57
SDF4-201ENST00000263741 SERTAD4-AS1Q5TG53 156 aa11.5□□□□□ -0.57
SDF4-201ENST00000263741 EPM2AB3EWF7 344 aa11.49□□□□□ -0.57
SDF4-201ENST00000263741 PHF5AQ7RTV0 110 aaKnown RBP11.48□□□□□ -0.57
SDF4-201ENST00000263741 NDUFV3P56181 108 aaKnown RBP11.48□□□□□ -0.57
SDF4-201ENST00000263741 VPS13BQ7Z7G8 4022 aa11.48□□□□□ -0.57
SDF4-201ENST00000263741 FAM229AH3BQW9 127 aa11.47□□□□□ -0.57
SDF4-201ENST00000263741 BAALC-AS2P0C853 105 aa11.47□□□□□ -0.57
SDF4-201ENST00000263741 INAFM2P0DMQ5 153 aa11.47□□□□□ -0.57
SDF4-201ENST00000263741 DNAL4O96015 105 aa11.45□□□□□ -0.58
SDF4-201ENST00000263741 COX17Q14061 63 aa11.45□□□□□ -0.58
SDF4-201ENST00000263741 H0YGX0 51 aa11.44□□□□□ -0.58
SDF4-201ENST00000263741 ABCA13Q86UQ4 5058 aa11.44□□□□□ -0.58
SDF4-201ENST00000263741 RPL37AP61513 92 aaKnown RBP11.44□□□□□ -0.58
SDF4-201ENST00000263741 LINC00337Q8N6G1 96 aa11.44□□□□□ -0.58
SDF4-201ENST00000263741 C7orf33Q8WU49 177 aa11.44□□□□□ -0.58
SDF4-201ENST00000263741 Q8NDZ9 215 aa11.43□□□□□ -0.58
SDF4-201ENST00000263741 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
SDF4-201ENST00000263741 TRBV7-7A0A0K0K1E9 115 aa11.42□□□□□ -0.58
SDF4-201ENST00000263741 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
SDF4-201ENST00000263741 KRTAP10-4P60372 401 aaPredicted RBP11.42□□□□□ -0.58
SDF4-201ENST00000263741 KRTAP11-1Q8IUC1 163 aa11.42□□□□□ -0.58
SDF4-201ENST00000263741 FAM218AQ96MZ4 157 aa11.42□□□□□ -0.58
SDF4-201ENST00000263741 SMIM11BQ8TCY0 68 aa11.4□□□□□ -0.58
SDF4-201ENST00000263741 PLA2G1BP04054 148 aaKnown RBP11.4□□□□□ -0.58
SDF4-201ENST00000263741 IMUPQ9GZP8 106 aa11.4□□□□□ -0.58
SDF4-201ENST00000263741 C22orf24Q9Y442 160 aa11.4□□□□□ -0.58
SDF4-201ENST00000263741 LINC00643Q86TS7 51 aa11.39□□□□□ -0.59
SDF4-201ENST00000263741 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
SDF4-201ENST00000263741 VPREB1P12018 145 aa11.37□□□□□ -0.59
SDF4-201ENST00000263741 PRR3P79522 188 aaKnown RBP11.37□□□□□ -0.59
SDF4-201ENST00000263741 OR13C6PQ8NH95 151 aa11.37□□□□□ -0.59
SDF4-201ENST00000263741 UBE2BP63146 152 aa11.36□□□□□ -0.59
SDF4-201ENST00000263741 PLA2G2DQ9UNK4 145 aa11.36□□□□□ -0.59
SDF4-201ENST00000263741 MRPL55Q7Z7F7 128 aaKnown RBP11.36□□□□□ -0.59
SDF4-201ENST00000263741 NKAPP1Q8N9T2 125 aa11.36□□□□□ -0.59
SDF4-201ENST00000263741 PSORS1C2Q9UIG4 136 aa11.36□□□□□ -0.59
SDF4-201ENST00000263741 PCLOQ9Y6V0 5065 aa11.34□□□□□ -0.59
SDF4-201ENST00000263741 RPL37AP8A6NKH3 93 aa11.34□□□□□ -0.59
SDF4-201ENST00000263741 GAGE2AQ6NT46 116 aa11.34□□□□□ -0.59
SDF4-201ENST00000263741 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
SDF4-201ENST00000263741 LINC00167Q96N53 147 aa11.33□□□□□ -0.6
SDF4-201ENST00000263741 IGLV5-37A0A075B6J1 123 aa11.32□□□□□ -0.6
SDF4-201ENST00000263741 NCR3O14931 201 aa11.32□□□□□ -0.6
SDF4-201ENST00000263741 C1orf137Q5JT78 98 aa11.31□□□□□ -0.6
SDF4-201ENST00000263741 A0A1B0GX51 115 aa11.29□□□□□ -0.6
SDF4-201ENST00000263741 B5MCH6 92 aa11.29□□□□□ -0.6
SDF4-201ENST00000263741 NDUFC2O95298 119 aa11.29□□□□□ -0.6
SDF4-201ENST00000263741 SMCR5Q8TEV8 140 aa11.29□□□□□ -0.6
SDF4-201ENST00000263741 ORMDL1Q9P0S3 153 aa11.29□□□□□ -0.6
SDF4-201ENST00000263741 SS18L2Q9UHA2 77 aa11.29□□□□□ -0.6
SDF4-201ENST00000263741 PKHD1L1Q86WI1 4243 aa11.29□□□□□ -0.6
SDF4-201ENST00000263741 FAM236AA0A1B0GUQ0 79 aa11.28□□□□□ -0.6
SDF4-201ENST00000263741 FAM236BA0A1B0GV22 79 aa11.28□□□□□ -0.6
SDF4-201ENST00000263741 CCDC179H3BU77 68 aa11.28□□□□□ -0.6
SDF4-201ENST00000263741 MYCBP2O75592 4640 aa11.27□□□□□ -0.6
SDF4-201ENST00000263741 OBSCN-AS1Q96MR7 158 aa11.26□□□□□ -0.61
SDF4-201ENST00000263741 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
SDF4-201ENST00000263741 C14orf132Q9NPU4 83 aa11.24□□□□□ -0.61
SDF4-201ENST00000263741 M0R378 163 aa11.23□□□□□ -0.61
SDF4-201ENST00000263741 IGLV1-50A0A075B6I6 118 aa11.23□□□□□ -0.61
SDF4-201ENST00000263741 IGLV7-43P04211 117 aa11.22□□□□□ -0.61
SDF4-201ENST00000263741 JMJD7-PLA2G4BH0Y9G9 81 aa11.21□□□□□ -0.62
SDF4-201ENST00000263741 LRP1Q07954 4544 aaKnown RBP11.2□□□□□ -0.62
SDF4-201ENST00000263741 TRBV10-3A0A0K0K1G6 114 aa11.2□□□□□ -0.62
SDF4-201ENST00000263741 TMEM256-PLSCR3K7ERE1 68 aa11.19□□□□□ -0.62
SDF4-201ENST00000263741 Q6JHZ5 121 aa11.19□□□□□ -0.62
SDF4-201ENST00000263741 S100A7L2Q5SY68 101 aa11.18□□□□□ -0.62
SDF4-201ENST00000263741 BCE1O60756 84 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms