RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 KRTAP10-4P60372 401 aaPredicted RBP13.44□□□□□ -0.26
CCNE1-201ENST00000262643 RPL37AP61513 92 aaKnown RBP13.44□□□□□ -0.26
CCNE1-201ENST00000262643 RNF151Q2KHN1 245 aa13.44□□□□□ -0.26
CCNE1-201ENST00000262643 PKIGQ9Y2B9 76 aa13.43□□□□□ -0.26
CCNE1-201ENST00000262643 PLAC8Q9NZF1 115 aa13.42□□□□□ -0.26
CCNE1-201ENST00000262643 F8W1H4 67 aa13.42□□□□□ -0.26
CCNE1-201ENST00000262643 RPL18AQ02543 176 aaKnown RBP13.42□□□□□ -0.26
CCNE1-201ENST00000262643 ATXN8Q156A1 80 aa13.42□□□□□ -0.26
CCNE1-201ENST00000262643 SMIM11BQ8TCY0 68 aa13.42□□□□□ -0.26
CCNE1-201ENST00000262643 CLEC2BQ92478 149 aa13.41□□□□□ -0.26
CCNE1-201ENST00000262643 PRO0461Q9UI25 63 aa13.41□□□□□ -0.26
CCNE1-201ENST00000262643 RPL28P46779 137 aaKnown RBP13.4□□□□□ -0.26
CCNE1-201ENST00000262643 LINC00474Q9P2X8 69 aa13.4□□□□□ -0.26
CCNE1-201ENST00000262643 LOC107984640A0A0U1RRK4 108 aa13.4□□□□□ -0.26
CCNE1-201ENST00000262643 TLX1NBP0CAT3 122 aa13.4□□□□□ -0.26
CCNE1-201ENST00000262643 GAGE2BQ13066 116 aa13.4□□□□□ -0.26
CCNE1-201ENST00000262643 C9orf129Q5T035 196 aaKnown RBP13.4□□□□□ -0.26
CCNE1-201ENST00000262643 DMBT1Q9UGM3 2413 aaPredicted RBP13.37□□□□□ -0.27
CCNE1-201ENST00000262643 VPREB1P12018 145 aa13.37□□□□□ -0.27
CCNE1-201ENST00000262643 TMEM126AQ9H061 195 aa13.37□□□□□ -0.27
CCNE1-201ENST00000262643 LST1O00453 97 aa13.35□□□□□ -0.27
CCNE1-201ENST00000262643 S100A7L2Q5SY68 101 aa13.35□□□□□ -0.27
CCNE1-201ENST00000262643 HERC1Q15751 4861 aa13.35□□□□□ -0.27
CCNE1-201ENST00000262643 C9JAW5 83 aa13.35□□□□□ -0.27
CCNE1-201ENST00000262643 SMCPP49901 116 aaPredicted RBP13.34□□□□□ -0.27
CCNE1-201ENST00000262643 C7orf33Q8WU49 177 aa13.34□□□□□ -0.27
CCNE1-201ENST00000262643 TRBV10-2A0A0K0K1G8 114 aa13.33□□□□□ -0.28
CCNE1-201ENST00000262643 IGLV6-57P01721 117 aa13.31□□□□□ -0.28
CCNE1-201ENST00000262643 SERTAD4-AS1Q5TG53 156 aa13.31□□□□□ -0.28
CCNE1-201ENST00000262643 PKHD1L1Q86WI1 4243 aa13.31□□□□□ -0.28
CCNE1-201ENST00000262643 SLC25A20O43772 301 aa13.3□□□□□ -0.28
CCNE1-201ENST00000262643 LRP1Q07954 4544 aaKnown RBP13.3□□□□□ -0.28
CCNE1-201ENST00000262643 TRBV10-3A0A0K0K1G6 114 aa13.3□□□□□ -0.28
CCNE1-201ENST00000262643 FAM168BA1KXE4 195 aa13.3□□□□□ -0.28
CCNE1-201ENST00000262643 FAM218AQ96MZ4 157 aa13.3□□□□□ -0.28
CCNE1-201ENST00000262643 ETDBQ3ZM63 59 aa13.29□□□□□ -0.28
CCNE1-201ENST00000262643 A0A1W2PNN7 141 aa13.29□□□□□ -0.28
CCNE1-201ENST00000262643 M0R378 163 aa13.29□□□□□ -0.28
CCNE1-201ENST00000262643 FAT3Q8TDW7 4589 aa13.27□□□□□ -0.28
CCNE1-201ENST00000262643 H0YGX0 51 aa13.27□□□□□ -0.29
CCNE1-201ENST00000262643 J3QL48 77 aa13.27□□□□□ -0.29
CCNE1-201ENST00000262643 OCIAD2Q56VL3 154 aa13.26□□□□□ -0.29
CCNE1-201ENST00000262643 C6orf99Q4VX62 202 aa13.25□□□□□ -0.29
CCNE1-201ENST00000262643 KRTAP7-1Q8IUC3 87 aa13.25□□□□□ -0.29
CCNE1-201ENST00000262643 PLA2G2DQ9UNK4 145 aa13.25□□□□□ -0.29
CCNE1-201ENST00000262643 TRACP01848 142 aa13.24□□□□□ -0.29
CCNE1-201ENST00000262643 ANKRD29Q8N6D5 301 aa13.24□□□□□ -0.29
CCNE1-201ENST00000262643 NKAPP1Q8N9T2 125 aa13.24□□□□□ -0.29
CCNE1-201ENST00000262643 KRTAP29-1A8MX34 341 aaPredicted RBP13.23□□□□□ -0.29
CCNE1-201ENST00000262643 TRAV23DV6A0A075B6W5 121 aa13.22□□□□□ -0.29
CCNE1-201ENST00000262643 M0QXV9 152 aa13.22□□□□□ -0.29
CCNE1-201ENST00000262643 FAM19A5Q7Z5A7 132 aaPredicted RBP13.22□□□□□ -0.29
CCNE1-201ENST00000262643 H3BT86 120 aa13.2□□□□□ -0.3
CCNE1-201ENST00000262643 TEN1Q86WV5 123 aa13.2□□□□□ -0.3
CCNE1-201ENST00000262643 C22orf24Q9Y442 160 aa13.2□□□□□ -0.3
CCNE1-201ENST00000262643 PHF5AQ7RTV0 110 aaKnown RBP13.19□□□□□ -0.3
CCNE1-201ENST00000262643 IGLV5-37A0A075B6J1 123 aa13.18□□□□□ -0.3
CCNE1-201ENST00000262643 LINC01600Q96MT4 127 aa13.18□□□□□ -0.3
CCNE1-201ENST00000262643 K7ERU9 68 aa13.18□□□□□ -0.3
CCNE1-201ENST00000262643 ZNF73O43830 326 aaPredicted RBP13.17□□□□□ -0.3
CCNE1-201ENST00000262643 DNAL4O96015 105 aa13.17□□□□□ -0.3
CCNE1-201ENST00000262643 RPL37AP8A6NKH3 93 aa13.17□□□□□ -0.3
CCNE1-201ENST00000262643 OXTP01178 125 aa13.16□□□□□ -0.3
CCNE1-201ENST00000262643 LINC00167Q96N53 147 aa13.16□□□□□ -0.3
CCNE1-201ENST00000262643 DIRC1Q969H9 104 aa13.15□□□□□ -0.3
CCNE1-201ENST00000262643 MRPL55Q7Z7F7 128 aaKnown RBP13.14□□□□□ -0.31
CCNE1-201ENST00000262643 BAALC-AS2P0C853 105 aa13.13□□□□□ -0.31
CCNE1-201ENST00000262643 KCNQ1DNQ9H478 68 aa13.13□□□□□ -0.31
CCNE1-201ENST00000262643 IGLV1-50A0A075B6I6 118 aa13.12□□□□□ -0.31
CCNE1-201ENST00000262643 LINC00575Q6W349 94 aa13.12□□□□□ -0.31
CCNE1-201ENST00000262643 PPDPFLQ8WWR9 84 aa13.12□□□□□ -0.31
CCNE1-201ENST00000262643 PSORS1C2Q9UIG4 136 aa13.12□□□□□ -0.31
CCNE1-201ENST00000262643 CBY1Q9Y3M2 126 aa13.12□□□□□ -0.31
CCNE1-201ENST00000262643 A0A1B0GX51 115 aa13.11□□□□□ -0.31
CCNE1-201ENST00000262643 COX7BP24311 80 aa13.09□□□□□ -0.31
CCNE1-201ENST00000262643 TEX49A0A1B0GTD5 131 aa13.08□□□□□ -0.31
CCNE1-201ENST00000262643 J3QR89 54 aa13.08□□□□□ -0.31
CCNE1-201ENST00000262643 ELOF1P60002 83 aaKnown RBP13.08□□□□□ -0.32
CCNE1-201ENST00000262643 C1orf137Q5JT78 98 aa13.08□□□□□ -0.32
CCNE1-201ENST00000262643 SNCGO76070 127 aa13.07□□□□□ -0.32
CCNE1-201ENST00000262643 KRTAP11-1Q8IUC1 163 aa13.07□□□□□ -0.32
CCNE1-201ENST00000262643 TRBV7-6A0A0J9YX20 115 aa13.06□□□□□ -0.32
CCNE1-201ENST00000262643 hADV29S1A0JD25 119 aa13.06□□□□□ -0.32
CCNE1-201ENST00000262643 UBE2BP63146 152 aa13.06□□□□□ -0.32
CCNE1-201ENST00000262643 SPINK6Q6UWN8 80 aa13.06□□□□□ -0.32
CCNE1-201ENST00000262643 ORMDL1Q9P0S3 153 aa13.06□□□□□ -0.32
CCNE1-201ENST00000262643 PRYO14603 147 aa13.03□□□□□ -0.32
CCNE1-201ENST00000262643 KRTAP4-16G5E9R7 235 aaPredicted RBP13.01□□□□□ -0.33
CCNE1-201ENST00000262643 SPRR1AP35321 89 aa13.01□□□□□ -0.33
CCNE1-201ENST00000262643 MT1HL1P0DM35 61 aa13□□□□□ -0.33
CCNE1-201ENST00000262643 IGLV7-43P04211 117 aa12.98□□□□□ -0.33
CCNE1-201ENST00000262643 REG3GQ6UW15 175 aa12.98□□□□□ -0.33
CCNE1-201ENST00000262643 B5MCH6 92 aa12.98□□□□□ -0.33
CCNE1-201ENST00000262643 Q6ZQY7 126 aa12.98□□□□□ -0.33
CCNE1-201ENST00000262643 VPS25Q9BRG1 176 aa12.98□□□□□ -0.33
CCNE1-201ENST00000262643 ETDCA0A1B0GVM5 59 aa12.97□□□□□ -0.33
CCNE1-201ENST00000262643 TMEM256-PLSCR3K7ERE1 68 aa12.96□□□□□ -0.34
CCNE1-201ENST00000262643 Q6ZRX8 168 aa12.95□□□□□ -0.34
CCNE1-201ENST00000262643 TNXBP22105 4242 aa12.95□□□□□ -0.34
CCNE1-201ENST00000262643 Q9BRP9 147 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms