RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 K7ERS5 55 aa4.88□□□□□ -1.63
GPNMB-201ENST00000258733 IGHV3-11P01762 117 aa4.88□□□□□ -1.63
GPNMB-201ENST00000258733 IGHV4-28A0A0C4DH34 117 aa4.88□□□□□ -1.63
GPNMB-201ENST00000258733 EGFEM1PQ0D2K5 195 aa4.87□□□□□ -1.63
GPNMB-201ENST00000258733 DEFB116Q30KQ4 102 aa4.87□□□□□ -1.63
GPNMB-201ENST00000258733 RNF5Q99942 180 aa4.87□□□□□ -1.63
GPNMB-201ENST00000258733 CFAP46Q8IYW2 2715 aa4.87□□□□□ -1.63
GPNMB-201ENST00000258733 C2CD3Q4AC94 2353 aa4.87□□□□□ -1.63
GPNMB-201ENST00000258733 SPTA1P02549 2419 aa4.86□□□□□ -1.63
GPNMB-201ENST00000258733 BOD1L1Q8NFC6 3051 aa4.86□□□□□ -1.63
GPNMB-201ENST00000258733 IGLV5-52A0A0A0MRZ9 124 aa4.86□□□□□ -1.63
GPNMB-201ENST00000258733 RPL37AP8A6NKH3 93 aa4.86□□□□□ -1.63
GPNMB-201ENST00000258733 DNAH10OSP0CZ25 163 aa4.86□□□□□ -1.63
GPNMB-201ENST00000258733 HRES1P13985 223 aa4.86□□□□□ -1.63
GPNMB-201ENST00000258733 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.85□□□□□ -1.63
GPNMB-201ENST00000258733 IGHV4-61A0A0C4DH41 118 aa4.85□□□□□ -1.63
GPNMB-201ENST00000258733 IGKV3OR2-268A0A0C4DH90 116 aa4.85□□□□□ -1.63
GPNMB-201ENST00000258733 WFDC13Q8IUB5 93 aa4.85□□□□□ -1.63
GPNMB-201ENST00000258733 KAAG1Q9UBP8 84 aa4.85□□□□□ -1.63
GPNMB-201ENST00000258733 A0A087WSZ3 146 aa4.85□□□□□ -1.63
GPNMB-201ENST00000258733 UQCR11O14957 56 aa4.85□□□□□ -1.63
GPNMB-201ENST00000258733 PIEZO2Q9H5I5 2752 aa4.84□□□□□ -1.63
GPNMB-201ENST00000258733 CSNK1G2-AS1Q8NCQ2 148 aa4.84□□□□□ -1.63
GPNMB-201ENST00000258733 KLK9Q2XQG4 91 aa4.83□□□□□ -1.64
GPNMB-201ENST00000258733 C1orf137Q5JT78 98 aa4.83□□□□□ -1.64
GPNMB-201ENST00000258733 Q6ZSN1 163 aa4.83□□□□□ -1.64
GPNMB-201ENST00000258733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-201ENST00000258733 IGLV5-37A0A075B6J1 123 aa4.83□□□□□ -1.64
GPNMB-201ENST00000258733 KRTAP4-16G5E9R7 235 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-201ENST00000258733 Q8IZM0 81 aa4.83□□□□□ -1.64
GPNMB-201ENST00000258733 CAMK2N2Q96S95 79 aa4.83□□□□□ -1.64
GPNMB-201ENST00000258733 IGKV3-7A0A075B6H7 116 aa4.82□□□□□ -1.64
GPNMB-201ENST00000258733 IGLV10-54A0A075B6I4 117 aa4.82□□□□□ -1.64
GPNMB-201ENST00000258733 WFDC10BQ8IUB3 73 aa4.82□□□□□ -1.64
GPNMB-201ENST00000258733 DMXL2Q8TDJ6 3036 aa4.82□□□□□ -1.64
GPNMB-201ENST00000258733 APC2O95996 2303 aa4.81□□□□□ -1.64
GPNMB-201ENST00000258733 LYPD2Q6UXB3 125 aa4.81□□□□□ -1.64
GPNMB-201ENST00000258733 IGLV6-57P01721 117 aa4.81□□□□□ -1.64
GPNMB-201ENST00000258733 PCOTHQ58A44 107 aa4.81□□□□□ -1.64
GPNMB-201ENST00000258733 SMG1Q96Q15 3661 aaKnown RBP4.81□□□□□ -1.64
GPNMB-201ENST00000258733 A0A1B0GU69 56 aa4.8□□□□□ -1.64
GPNMB-201ENST00000258733 LINC00472Q9H8W2 130 aa4.8□□□□□ -1.64
GPNMB-201ENST00000258733 COX17Q14061 63 aa4.79□□□□□ -1.64
GPNMB-201ENST00000258733 KRTAP26-1Q6PEX3 210 aa4.79□□□□□ -1.64
GPNMB-201ENST00000258733 DMAC1Q96GE9 116 aa4.79□□□□□ -1.64
GPNMB-201ENST00000258733 MINOS1-NBL1R4GNA1 71 aa4.79□□□□□ -1.64
GPNMB-201ENST00000258733 NUPR2A6NF83 97 aa4.79□□□□□ -1.64
GPNMB-201ENST00000258733 A0A0J9YWU9 116 aa4.78□□□□□ -1.64
GPNMB-201ENST00000258733 KRTAP29-1A8MX34 341 aaPredicted RBP4.78□□□□□ -1.64
GPNMB-201ENST00000258733 BSNQ9UPA5 3926 aa4.78□□□□□ -1.64
GPNMB-201ENST00000258733 KALRNO60229 2985 aa4.77□□□□□ -1.65
GPNMB-201ENST00000258733 PKDREJQ9NTG1 2253 aa4.77□□□□□ -1.65
GPNMB-201ENST00000258733 IGLV5-48A0A075B6I7 105 aa4.77□□□□□ -1.65
GPNMB-201ENST00000258733 TLX1NBP0CAT3 122 aa4.77□□□□□ -1.65
GPNMB-201ENST00000258733 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
GPNMB-201ENST00000258733 CIRBP-AS1Q8TBR5 109 aa4.77□□□□□ -1.65
GPNMB-201ENST00000258733 WNK1Q9H4A3 2382 aa4.77□□□□□ -1.65
GPNMB-201ENST00000258733 ABCA12Q86UK0 2595 aa4.77□□□□□ -1.65
GPNMB-201ENST00000258733 ACACAQ13085 2346 aa4.77□□□□□ -1.65
GPNMB-201ENST00000258733 ATMQ13315 3056 aa4.76□□□□□ -1.65
GPNMB-201ENST00000258733 ODF3BA8MYP8 253 aa4.76□□□□□ -1.65
GPNMB-201ENST00000258733 PCNX1Q96RV3 2341 aa4.76□□□□□ -1.65
GPNMB-201ENST00000258733 DEFB131BA0A096LNP1 70 aa4.76□□□□□ -1.65
GPNMB-201ENST00000258733 DHRS4-AS1Q9P1J3 65 aa4.76□□□□□ -1.65
GPNMB-201ENST00000258733 DNHD1Q96M86 4753 aa4.76□□□□□ -1.65
GPNMB-201ENST00000258733 TRGV1A0A0A0MS02 117 aa4.75□□□□□ -1.65
GPNMB-201ENST00000258733 INSP01308 110 aa4.75□□□□□ -1.65
GPNMB-201ENST00000258733 DEFB109BQ30KR1 87 aa4.75□□□□□ -1.65
GPNMB-201ENST00000258733 Q5W150 140 aa4.75□□□□□ -1.65
GPNMB-201ENST00000258733 Q8NBF4 154 aa4.75□□□□□ -1.65
GPNMB-201ENST00000258733 SPTAN1Q13813 2472 aaKnown RBP4.75□□□□□ -1.65
GPNMB-201ENST00000258733 A6NDX4 124 aa4.75□□□□□ -1.65
GPNMB-201ENST00000258733 SPINK13Q1W4C9 94 aa4.74□□□□□ -1.65
GPNMB-201ENST00000258733 ABCA2Q9BZC7 2435 aa4.74□□□□□ -1.65
GPNMB-201ENST00000258733 HTN1P15515 57 aa4.73□□□□□ -1.65
GPNMB-201ENST00000258733 RP1L1Q8IWN7 2480 aaPredicted RBP4.73□□□□□ -1.65
GPNMB-201ENST00000258733 CREBBPQ92793 2442 aa4.73□□□□□ -1.65
GPNMB-201ENST00000258733 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
GPNMB-201ENST00000258733 C7orf33Q8WU49 177 aa4.73□□□□□ -1.65
GPNMB-201ENST00000258733 ADGRG4Q8IZF6 3080 aa4.72□□□□□ -1.65
GPNMB-201ENST00000258733 A0A087WTM6 91 aa4.72□□□□□ -1.65
GPNMB-201ENST00000258733 MINOS1Q5TGZ0 78 aa4.71□□□□□ -1.65
GPNMB-201ENST00000258733 AKAP6Q13023 2319 aa4.71□□□□□ -1.65
GPNMB-201ENST00000258733 USP9YO00507 2555 aaPredicted RBP4.7□□□□□ -1.66
GPNMB-201ENST00000258733 NF1P21359 2839 aa4.69□□□□□ -1.66
GPNMB-201ENST00000258733 Q8N377 158 aa4.68□□□□□ -1.66
GPNMB-201ENST00000258733 LINC00304Q8N9R0 145 aa4.68□□□□□ -1.66
GPNMB-201ENST00000258733 RELNP78509 3460 aa4.68□□□□□ -1.66
GPNMB-201ENST00000258733 DEFB105AQ8NG35 78 aa4.68□□□□□ -1.66
GPNMB-201ENST00000258733 ITPR3Q14573 2671 aa4.68□□□□□ -1.66
GPNMB-201ENST00000258733 RHPN1-AS1Q9BWJ2 59 aa4.67□□□□□ -1.66
GPNMB-201ENST00000258733 OTOGQ6ZRI0 2925 aa4.67□□□□□ -1.66
GPNMB-201ENST00000258733 IGKV2-24A0A0C4DH68 120 aa4.67□□□□□ -1.66
GPNMB-201ENST00000258733 A0A1B0GVX0 72 aa4.66□□□□□ -1.66
GPNMB-201ENST00000258733 ROS1P08922 2347 aa4.66□□□□□ -1.66
GPNMB-201ENST00000258733 NBPF19A0A087WUL8 3843 aa4.65□□□□□ -1.66
GPNMB-201ENST00000258733 G3V318 75 aa4.65□□□□□ -1.67
GPNMB-201ENST00000258733 ACYP2P14621 99 aa4.65□□□□□ -1.67
GPNMB-201ENST00000258733 RPL37AP61513 92 aaKnown RBP4.65□□□□□ -1.67
GPNMB-201ENST00000258733 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms