RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 FAM30AQ9NZY2 134 aa7.99□□□□□ -1.13
USHBP1-201ENST00000252597 WIPF1O43516 503 aa7.99□□□□□ -1.13
USHBP1-201ENST00000252597 LINC00167Q96N53 147 aa7.99□□□□□ -1.13
USHBP1-201ENST00000252597 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
USHBP1-201ENST00000252597 A0A1W2PNN7 141 aa7.98□□□□□ -1.13
USHBP1-201ENST00000252597 RPS28P62857 69 aaKnown RBP7.98□□□□□ -1.13
USHBP1-201ENST00000252597 DEFB116Q30KQ4 102 aa7.98□□□□□ -1.13
USHBP1-201ENST00000252597 H7BZZ5 65 aa7.98□□□□□ -1.13
USHBP1-201ENST00000252597 Q8NAQ8 132 aa7.98□□□□□ -1.13
USHBP1-201ENST00000252597 BRK1Q8WUW1 75 aa7.97□□□□□ -1.13
USHBP1-201ENST00000252597 LINC00612Q8N6U2 182 aa7.97□□□□□ -1.13
USHBP1-201ENST00000252597 MIFP14174 115 aa7.96□□□□□ -1.13
USHBP1-201ENST00000252597 A0A0J9YWU9 116 aa7.96□□□□□ -1.14
USHBP1-201ENST00000252597 UBE2BP63146 152 aa7.96□□□□□ -1.14
USHBP1-201ENST00000252597 Q6ZRP5 223 aa7.95□□□□□ -1.14
USHBP1-201ENST00000252597 M0R378 163 aa7.95□□□□□ -1.14
USHBP1-201ENST00000252597 LOC110117498A0A087WWA1 95 aa7.94□□□□□ -1.14
USHBP1-201ENST00000252597 TMEM254Q8TBM7 123 aa7.94□□□□□ -1.14
USHBP1-201ENST00000252597 HIGD2AQ9BW72 106 aa7.94□□□□□ -1.14
USHBP1-201ENST00000252597 PDE6GP18545 87 aa7.94□□□□□ -1.14
USHBP1-201ENST00000252597 Q5XG85 94 aa7.94□□□□□ -1.14
USHBP1-201ENST00000252597 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
USHBP1-201ENST00000252597 VPREB1P12018 145 aa7.93□□□□□ -1.14
USHBP1-201ENST00000252597 SYCNQ0VAF6 134 aa7.93□□□□□ -1.14
USHBP1-201ENST00000252597 ETDCA0A1B0GVM5 59 aa7.93□□□□□ -1.14
USHBP1-201ENST00000252597 ST20-AS1Q8NBB2 130 aa7.93□□□□□ -1.14
USHBP1-201ENST00000252597 ELOF1P60002 83 aaKnown RBP7.93□□□□□ -1.14
USHBP1-201ENST00000252597 ESRGQ1W209 222 aa7.93□□□□□ -1.14
USHBP1-201ENST00000252597 LINC00336Q6ZUF6 198 aa7.93□□□□□ -1.14
USHBP1-201ENST00000252597 A0A096LNI7 61 aa7.92□□□□□ -1.14
USHBP1-201ENST00000252597 IGKV2-24A0A0C4DH68 120 aa7.92□□□□□ -1.14
USHBP1-201ENST00000252597 TRBV7-6A0A0J9YX20 115 aa7.92□□□□□ -1.14
USHBP1-201ENST00000252597 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
USHBP1-201ENST00000252597 SERTAD4-AS1Q5TG53 156 aa7.91□□□□□ -1.14
USHBP1-201ENST00000252597 SERP1Q9Y6X1 66 aa7.91□□□□□ -1.14
USHBP1-201ENST00000252597 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.14
USHBP1-201ENST00000252597 DEFB131BA0A096LNP1 70 aa7.9□□□□□ -1.14
USHBP1-201ENST00000252597 PRR34Q9NV39 138 aa7.9□□□□□ -1.14
USHBP1-201ENST00000252597 CXCL6P80162 114 aa7.9□□□□□ -1.15
USHBP1-201ENST00000252597 EGFEM1PQ0D2K5 195 aa7.9□□□□□ -1.15
USHBP1-201ENST00000252597 SMIM29Q86T20 159 aa7.89□□□□□ -1.15
USHBP1-201ENST00000252597 C7orf33Q8WU49 177 aa7.89□□□□□ -1.15
USHBP1-201ENST00000252597 TRBV7-4A0A0J9YYF1 115 aa7.89□□□□□ -1.15
USHBP1-201ENST00000252597 C15orf56Q8N910 161 aa7.88□□□□□ -1.15
USHBP1-201ENST00000252597 WFDC13Q8IUB5 93 aa7.87□□□□□ -1.15
USHBP1-201ENST00000252597 LINC00528Q8N1L1 170 aa7.87□□□□□ -1.15
USHBP1-201ENST00000252597 CASC10Q5T4H9 136 aa7.86□□□□□ -1.15
USHBP1-201ENST00000252597 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
USHBP1-201ENST00000252597 SMIM26A0A096LP01 95 aa7.85□□□□□ -1.15
USHBP1-201ENST00000252597 KLKP1Q107X0 134 aa7.85□□□□□ -1.15
USHBP1-201ENST00000252597 C11orf45Q8TAV5 145 aa7.85□□□□□ -1.15
USHBP1-201ENST00000252597 SRRM2Q9UQ35 2752 aaKnown RBP7.85□□□□□ -1.15
USHBP1-201ENST00000252597 PRYO14603 147 aa7.85□□□□□ -1.15
USHBP1-201ENST00000252597 F8WDY8 70 aa7.85□□□□□ -1.15
USHBP1-201ENST00000252597 FAM229BQ4G0N7 80 aa7.84□□□□□ -1.15
USHBP1-201ENST00000252597 Q8N377 158 aa7.84□□□□□ -1.15
USHBP1-201ENST00000252597 IGKV4-1P06312 121 aa7.84□□□□□ -1.15
USHBP1-201ENST00000252597 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.83□□□□□ -1.16
USHBP1-201ENST00000252597 FP248Q71RG6 208 aaPredicted RBP7.83□□□□□ -1.16
USHBP1-201ENST00000252597 KRTAP24-1Q3LI83 254 aa7.83□□□□□ -1.16
USHBP1-201ENST00000252597 PRLHP81277 87 aa7.82□□□□□ -1.16
USHBP1-201ENST00000252597 GVQW2A0A096LPI5 108 aaPredicted RBP7.81□□□□□ -1.16
USHBP1-201ENST00000252597 ERC2-IT1O76042 136 aa7.81□□□□□ -1.16
USHBP1-201ENST00000252597 SEC61GP60059 68 aa7.81□□□□□ -1.16
USHBP1-201ENST00000252597 PSPHP1O15172 72 aa7.8□□□□□ -1.16
USHBP1-201ENST00000252597 H3BQ85 93 aa7.8□□□□□ -1.16
USHBP1-201ENST00000252597 K7EQZ3 153 aa7.79□□□□□ -1.16
USHBP1-201ENST00000252597 A0A1W2PNM2 257 aa7.78□□□□□ -1.16
USHBP1-201ENST00000252597 PSCAO43653 123 aa7.78□□□□□ -1.16
USHBP1-201ENST00000252597 NDUFC1O43677 76 aa7.78□□□□□ -1.16
USHBP1-201ENST00000252597 KRTAP10-11P60412 298 aa7.78□□□□□ -1.16
USHBP1-201ENST00000252597 RPL37AP61513 92 aaKnown RBP7.78□□□□□ -1.16
USHBP1-201ENST00000252597 A0A087WSZ3 146 aa7.77□□□□□ -1.17
USHBP1-201ENST00000252597 Q9BRP9 147 aa7.77□□□□□ -1.17
USHBP1-201ENST00000252597 V9GYY9 64 aa7.75□□□□□ -1.17
USHBP1-201ENST00000252597 Q6ZRX8 168 aa7.75□□□□□ -1.17
USHBP1-201ENST00000252597 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
USHBP1-201ENST00000252597 PRO0628Q9UI54 55 aa7.74□□□□□ -1.17
USHBP1-201ENST00000252597 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
USHBP1-201ENST00000252597 KRTAP26-1Q6PEX3 210 aa7.73□□□□□ -1.17
USHBP1-201ENST00000252597 MRPL55Q7Z7F7 128 aaKnown RBP7.73□□□□□ -1.17
USHBP1-201ENST00000252597 DHRS4-AS1Q9P1J3 65 aa7.73□□□□□ -1.17
USHBP1-201ENST00000252597 COL7A1Q02388 2944 aa7.73□□□□□ -1.17
USHBP1-201ENST00000252597 KCNQ1DNQ9H478 68 aa7.72□□□□□ -1.17
USHBP1-201ENST00000252597 LINC00208Q96KT6 92 aa7.72□□□□□ -1.17
USHBP1-201ENST00000252597 BCE1O60756 84 aa7.72□□□□□ -1.17
USHBP1-201ENST00000252597 LINC01556Q5JQF7 62 aa7.72□□□□□ -1.17
USHBP1-201ENST00000252597 LINC00476Q8WZB0 136 aa7.71□□□□□ -1.17
USHBP1-201ENST00000252597 Q8NBF4 154 aa7.71□□□□□ -1.18
USHBP1-201ENST00000252597 CHTF8P0CG12 524 aa7.7□□□□□ -1.18
USHBP1-201ENST00000252597 LINC00588Q9Y4M8 146 aa7.7□□□□□ -1.18
USHBP1-201ENST00000252597 ANK2Q01484 3957 aa7.7□□□□□ -1.18
USHBP1-201ENST00000252597 H0Y9J4 135 aa7.69□□□□□ -1.18
USHBP1-201ENST00000252597 C1orf195Q5TG92 126 aa7.69□□□□□ -1.18
USHBP1-201ENST00000252597 UBE2AP49459 152 aa7.69□□□□□ -1.18
USHBP1-201ENST00000252597 REG3GQ6UW15 175 aa7.69□□□□□ -1.18
USHBP1-201ENST00000252597 UBE2DNLQ8IWF7 75 aa7.69□□□□□ -1.18
USHBP1-201ENST00000252597 IGLV1-50A0A075B6I6 118 aa7.68□□□□□ -1.18
USHBP1-201ENST00000252597 MDFIQ99750 246 aa7.68□□□□□ -1.18
USHBP1-201ENST00000252597 DSCR10P59022 87 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms