RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 HSD52Q0P140 79 aa13.9□□□□□ -0.18
APOE-201ENST00000252486 CEND1Q8N111 149 aa13.9□□□□□ -0.18
APOE-201ENST00000252486 C12orf57Q99622 126 aa13.9□□□□□ -0.18
APOE-201ENST00000252486 TMEM238LA0A1B0GVL6 79 aa13.89□□□□□ -0.19
APOE-201ENST00000252486 A6NJY4 79 aa13.89□□□□□ -0.19
APOE-201ENST00000252486 H0Y9J4 135 aa13.89□□□□□ -0.19
APOE-201ENST00000252486 KRTAP13-1Q8IUC0 172 aa13.89□□□□□ -0.19
APOE-201ENST00000252486 PRO1933Q9H354 126 aa13.89□□□□□ -0.19
APOE-201ENST00000252486 KRTAP4-16G5E9R7 235 aaPredicted RBP13.88□□□□□ -0.19
APOE-201ENST00000252486 ZNF73O43830 326 aaPredicted RBP13.88□□□□□ -0.19
APOE-201ENST00000252486 HINT1P49773 126 aaPredicted RBP13.88□□□□□ -0.19
APOE-201ENST00000252486 PCLOQ9Y6V0 5065 aa13.86□□□□□ -0.19
APOE-201ENST00000252486 PRLHP81277 87 aa13.85□□□□□ -0.19
APOE-201ENST00000252486 PKHD1L1Q86WI1 4243 aa13.84□□□□□ -0.19
APOE-201ENST00000252486 B5MCH6 92 aa13.83□□□□□ -0.2
APOE-201ENST00000252486 TSTD3H0UI37 97 aa13.83□□□□□ -0.2
APOE-201ENST00000252486 A0A0B4J2C4 111 aa13.81□□□□□ -0.2
APOE-201ENST00000252486 CFC1BP0CG36 223 aa13.81□□□□□ -0.2
APOE-201ENST00000252486 CFC1P0CG37 223 aa13.81□□□□□ -0.2
APOE-201ENST00000252486 Q6ZRX8 168 aa13.81□□□□□ -0.2
APOE-201ENST00000252486 RAB37Q96AX2 223 aa13.81□□□□□ -0.2
APOE-201ENST00000252486 ABCA13Q86UQ4 5058 aa13.8□□□□□ -0.2
APOE-201ENST00000252486 C6orf99Q4VX62 202 aa13.8□□□□□ -0.2
APOE-201ENST00000252486 TRBV7-6A0A0J9YX20 115 aa13.79□□□□□ -0.2
APOE-201ENST00000252486 RPL13AP40429 203 aaKnown RBP13.79□□□□□ -0.2
APOE-201ENST00000252486 FXYD2P54710 66 aa13.79□□□□□ -0.2
APOE-201ENST00000252486 HIGD2AQ9BW72 106 aa13.79□□□□□ -0.2
APOE-201ENST00000252486 OXTP01178 125 aa13.78□□□□□ -0.2
APOE-201ENST00000252486 SMIM11BQ8TCY0 68 aa13.78□□□□□ -0.2
APOE-201ENST00000252486 COX7BP24311 80 aa13.75□□□□□ -0.21
APOE-201ENST00000252486 A0A1B0GWB2 263 aa13.74□□□□□ -0.21
APOE-201ENST00000252486 KRTAP29-1A8MX34 341 aaPredicted RBP13.74□□□□□ -0.21
APOE-201ENST00000252486 ELOF1P60002 83 aaKnown RBP13.74□□□□□ -0.21
APOE-201ENST00000252486 VAMP3Q15836 100 aa13.73□□□□□ -0.21
APOE-201ENST00000252486 SMCR5Q8TEV8 140 aa13.73□□□□□ -0.21
APOE-201ENST00000252486 PRO1854Q9UHT4 67 aa13.73□□□□□ -0.21
APOE-201ENST00000252486 ZNF706Q9Y5V0 76 aaPredicted RBP13.73□□□□□ -0.21
APOE-201ENST00000252486 DHRS4-AS1Q9P1J3 65 aa13.72□□□□□ -0.21
APOE-201ENST00000252486 FLG2Q5D862 2391 aaPredicted RBP13.71□□□□□ -0.21
APOE-201ENST00000252486 M0R143 59 aa13.71□□□□□ -0.21
APOE-201ENST00000252486 CTAG1AP78358 180 aa13.71□□□□□ -0.21
APOE-201ENST00000252486 LINC01600Q96MT4 127 aa13.71□□□□□ -0.21
APOE-201ENST00000252486 Q9BRP9 147 aa13.71□□□□□ -0.21
APOE-201ENST00000252486 NHP2Q9NX24 153 aaKnown RBP13.71□□□□□ -0.21
APOE-201ENST00000252486 BVES-AS1Q5T3Y7 98 aa13.7□□□□□ -0.22
APOE-201ENST00000252486 H7C2G1 150 aa13.68□□□□□ -0.22
APOE-201ENST00000252486 KRTAP1-4P0C5Y4 121 aa13.68□□□□□ -0.22
APOE-201ENST00000252486 Q1RN00 199 aa13.66□□□□□ -0.22
APOE-201ENST00000252486 SPRR4Q96PI1 79 aa13.65□□□□□ -0.22
APOE-201ENST00000252486 ERC2-IT1O76042 136 aa13.64□□□□□ -0.23
APOE-201ENST00000252486 FAM229BQ4G0N7 80 aa13.64□□□□□ -0.23
APOE-201ENST00000252486 J3QL48 77 aa13.63□□□□□ -0.23
APOE-201ENST00000252486 SLC25A20O43772 301 aa13.62□□□□□ -0.23
APOE-201ENST00000252486 K7ERJ3 54 aa13.6□□□□□ -0.23
APOE-201ENST00000252486 CRYGAP11844 174 aa13.6□□□□□ -0.23
APOE-201ENST00000252486 H0YGX0 51 aa13.59□□□□□ -0.23
APOE-201ENST00000252486 MYCBP2O75592 4640 aa13.59□□□□□ -0.23
APOE-201ENST00000252486 KRTAP10-8P60410 259 aa13.58□□□□□ -0.24
APOE-201ENST00000252486 LINC00575Q6W349 94 aa13.58□□□□□ -0.24
APOE-201ENST00000252486 FAT3Q8TDW7 4589 aa13.57□□□□□ -0.24
APOE-201ENST00000252486 LINC00483Q53H64 154 aa13.57□□□□□ -0.24
APOE-201ENST00000252486 PRR26Q8N8Z3 221 aa13.57□□□□□ -0.24
APOE-201ENST00000252486 MT1HL1P0DM35 61 aa13.56□□□□□ -0.24
APOE-201ENST00000252486 GAGE2AQ6NT46 116 aa13.56□□□□□ -0.24
APOE-201ENST00000252486 SNCGO76070 127 aa13.55□□□□□ -0.24
APOE-201ENST00000252486 ANAPC11Q9NYG5 84 aa13.55□□□□□ -0.24
APOE-201ENST00000252486 hADV29S1A0JD25 119 aa13.54□□□□□ -0.24
APOE-201ENST00000252486 TSPAN13O95857 204 aa13.54□□□□□ -0.24
APOE-201ENST00000252486 PSMB2P49721 201 aa13.54□□□□□ -0.24
APOE-201ENST00000252486 LRP1Q07954 4544 aaKnown RBP13.54□□□□□ -0.24
APOE-201ENST00000252486 A0A087X002 238 aa13.53□□□□□ -0.24
APOE-201ENST00000252486 TRIAP1O43715 76 aa13.53□□□□□ -0.24
APOE-201ENST00000252486 COX6CP09669 75 aa13.53□□□□□ -0.24
APOE-201ENST00000252486 ST20-AS1Q8NBB2 130 aa13.53□□□□□ -0.24
APOE-201ENST00000252486 SPRR1BP22528 89 aa13.51□□□□□ -0.25
APOE-201ENST00000252486 A0A1B0GX51 115 aa13.49□□□□□ -0.25
APOE-201ENST00000252486 TYMSOSQ8TAI1 123 aa13.49□□□□□ -0.25
APOE-201ENST00000252486 TEX49A0A1B0GTD5 131 aa13.48□□□□□ -0.25
APOE-201ENST00000252486 BATFQ16520 125 aa13.48□□□□□ -0.25
APOE-201ENST00000252486 IGLV5-48A0A075B6I7 105 aa13.47□□□□□ -0.25
APOE-201ENST00000252486 KRTAP13-2Q52LG2 175 aa13.47□□□□□ -0.25
APOE-201ENST00000252486 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.47□□□□□ -0.25
APOE-201ENST00000252486 Q6ZQY7 126 aa13.45□□□□□ -0.26
APOE-201ENST00000252486 DEFB105AQ8NG35 78 aa13.45□□□□□ -0.26
APOE-201ENST00000252486 LAMTOR3Q9UHA4 124 aa13.43□□□□□ -0.26
APOE-201ENST00000252486 SCGB1C2P0DMR2 95 aa13.42□□□□□ -0.26
APOE-201ENST00000252486 LINC01547P58512 204 aaPredicted RBP13.42□□□□□ -0.26
APOE-201ENST00000252486 C3orf22Q8N5N4 141 aa13.42□□□□□ -0.26
APOE-201ENST00000252486 FAM218AQ96MZ4 157 aa13.42□□□□□ -0.26
APOE-201ENST00000252486 OCIAD2Q56VL3 154 aa13.41□□□□□ -0.26
APOE-201ENST00000252486 PPDPFLQ8WWR9 84 aa13.41□□□□□ -0.26
APOE-201ENST00000252486 GHRHP01286 108 aa13.4□□□□□ -0.26
APOE-201ENST00000252486 IGLV9-49A0A0B4J1Y8 123 aa13.39□□□□□ -0.27
APOE-201ENST00000252486 SSBP3-AS1Q7Z2R9 100 aa13.39□□□□□ -0.27
APOE-201ENST00000252486 Q8N377 158 aa13.39□□□□□ -0.27
APOE-201ENST00000252486 CLEC2BQ92478 149 aa13.39□□□□□ -0.27
APOE-201ENST00000252486 DMBT1Q9UGM3 2413 aaPredicted RBP13.39□□□□□ -0.27
APOE-201ENST00000252486 TNXBP22105 4242 aa13.38□□□□□ -0.27
APOE-201ENST00000252486 DNAL4O96015 105 aa13.36□□□□□ -0.27
APOE-201ENST00000252486 MOBPQ13875 183 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms