RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 COL7A1Q02388 2944 aa11.04□□□□□ -0.64
SSPN-201ENST00000242729 CRYGAP11844 174 aa11.03□□□□□ -0.64
SSPN-201ENST00000242729 LOC110117498A0A087WWA1 95 aa11.02□□□□□ -0.64
SSPN-201ENST00000242729 TRAV10A0A0B4J240 114 aa11.02□□□□□ -0.65
SSPN-201ENST00000242729 NKAPP1Q8N9T2 125 aa11.02□□□□□ -0.65
SSPN-201ENST00000242729 DNAH10Q8IVF4 4471 aa11.02□□□□□ -0.65
SSPN-201ENST00000242729 C20orf197Q8N268 126 aa11.01□□□□□ -0.65
SSPN-201ENST00000242729 C3orf84H3BNL1 204 aa11□□□□□ -0.65
SSPN-201ENST00000242729 LINC01556Q5JQF7 62 aa11□□□□□ -0.65
SSPN-201ENST00000242729 LINC00528Q8N1L1 170 aa11□□□□□ -0.65
SSPN-201ENST00000242729 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
SSPN-201ENST00000242729 H3BNG1 76 aa10.99□□□□□ -0.65
SSPN-201ENST00000242729 LINC00588Q9Y4M8 146 aa10.99□□□□□ -0.65
SSPN-201ENST00000242729 ATP5EP2Q5VTU8 51 aa10.97□□□□□ -0.65
SSPN-201ENST00000242729 TRBV7-4A0A0J9YYF1 115 aa10.96□□□□□ -0.65
SSPN-201ENST00000242729 FAM19A5Q7Z5A7 132 aaPredicted RBP10.95□□□□□ -0.66
SSPN-201ENST00000242729 SNURFQ9Y675 71 aa10.95□□□□□ -0.66
SSPN-201ENST00000242729 ST20-AS1Q8NBB2 130 aa10.94□□□□□ -0.66
SSPN-201ENST00000242729 HUWE1Q7Z6Z7 4374 aaKnown RBP10.92□□□□□ -0.66
SSPN-201ENST00000242729 DNAH3Q8TD57 4116 aa10.92□□□□□ -0.66
SSPN-201ENST00000242729 A0A0G2JQZ4 141 aa10.91□□□□□ -0.66
SSPN-201ENST00000242729 A0A1W2PNN7 141 aa10.91□□□□□ -0.66
SSPN-201ENST00000242729 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
SSPN-201ENST00000242729 Q8N377 158 aa10.9□□□□□ -0.66
SSPN-201ENST00000242729 BPY2O14599 106 aa10.9□□□□□ -0.66
SSPN-201ENST00000242729 KRTAP7-1Q8IUC3 87 aa10.89□□□□□ -0.67
SSPN-201ENST00000242729 TM2D3Q9BRN9 247 aa10.89□□□□□ -0.67
SSPN-201ENST00000242729 Q9BRP9 147 aa10.88□□□□□ -0.67
SSPN-201ENST00000242729 OXTP01178 125 aa10.88□□□□□ -0.67
SSPN-201ENST00000242729 PDE6GP18545 87 aa10.88□□□□□ -0.67
SSPN-201ENST00000242729 IGKV2-24A0A0C4DH68 120 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 ERC2-IT1O76042 136 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 TRBV7-6A0A0J9YX20 115 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 RMI2Q96E14 147 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
SSPN-201ENST00000242729 J3KT08 172 aa10.86□□□□□ -0.67
SSPN-201ENST00000242729 ETDCA0A1B0GVM5 59 aa10.85□□□□□ -0.67
SSPN-201ENST00000242729 NREPQ16612 68 aa10.85□□□□□ -0.67
SSPN-201ENST00000242729 DNAH1Q9P2D7 4330 aa10.84□□□□□ -0.67
SSPN-201ENST00000242729 K7EIL1 84 aa10.84□□□□□ -0.67
SSPN-201ENST00000242729 TMEM258P61165 79 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 UBE2BP63146 152 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 DNAH9Q9NYC9 4486 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 CXCL6P80162 114 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 DNAH7Q8WXX0 4024 aa10.83□□□□□ -0.68
SSPN-201ENST00000242729 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.82□□□□□ -0.68
SSPN-201ENST00000242729 Q6ZRX8 168 aa10.82□□□□□ -0.68
SSPN-201ENST00000242729 IGLV1-50A0A075B6I6 118 aa10.82□□□□□ -0.68
SSPN-201ENST00000242729 H3BQ85 93 aa10.81□□□□□ -0.68
SSPN-201ENST00000242729 KRTAP1-5Q9BYS1 174 aa10.81□□□□□ -0.68
SSPN-201ENST00000242729 TRAV7A0A075B6U4 112 aa10.8□□□□□ -0.68
SSPN-201ENST00000242729 MRPL55Q7Z7F7 128 aaKnown RBP10.79□□□□□ -0.68
SSPN-201ENST00000242729 C5orf47Q569G3 176 aa10.78□□□□□ -0.68
SSPN-201ENST00000242729 PRLHP81277 87 aa10.77□□□□□ -0.68
SSPN-201ENST00000242729 A0A1W2PNM2 257 aa10.77□□□□□ -0.69
SSPN-201ENST00000242729 DEFB116Q30KQ4 102 aa10.77□□□□□ -0.69
SSPN-201ENST00000242729 KRTAP4-16G5E9R7 235 aaPredicted RBP10.76□□□□□ -0.69
SSPN-201ENST00000242729 IGKV4-1P06312 121 aa10.76□□□□□ -0.69
SSPN-201ENST00000242729 C1orf137Q5JT78 98 aa10.76□□□□□ -0.69
SSPN-201ENST00000242729 F8WEM9 126 aa10.76□□□□□ -0.69
SSPN-201ENST00000242729 H7BZZ5 65 aa10.76□□□□□ -0.69
SSPN-201ENST00000242729 A0A096LNI7 61 aa10.74□□□□□ -0.69
SSPN-201ENST00000242729 PSCAO43653 123 aa10.74□□□□□ -0.69
SSPN-201ENST00000242729 CHTF8P0CG12 524 aa10.74□□□□□ -0.69
SSPN-201ENST00000242729 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
SSPN-201ENST00000242729 DHRS4-AS1Q9P1J3 65 aa10.73□□□□□ -0.69
SSPN-201ENST00000242729 HIGD2AQ9BW72 106 aa10.73□□□□□ -0.69
SSPN-201ENST00000242729 FUSP35637 526 aaKnown RBP eCLIP10.72□□□□□ -0.69
SSPN-201ENST00000242729 FAM236DA0A1B0GTK5 79 aa10.72□□□□□ -0.69
SSPN-201ENST00000242729 FAM236CP0DP71 79 aa10.72□□□□□ -0.69
SSPN-201ENST00000242729 IGLV5-48A0A075B6I7 105 aa10.71□□□□□ -0.69
SSPN-201ENST00000242729 PRYO14603 147 aa10.71□□□□□ -0.69
SSPN-201ENST00000242729 C4orf26Q17RF5 130 aa10.71□□□□□ -0.7
SSPN-201ENST00000242729 REG3GQ6UW15 175 aa10.7□□□□□ -0.7
SSPN-201ENST00000242729 FAM30AQ9NZY2 134 aa10.7□□□□□ -0.7
SSPN-201ENST00000242729 F8WDY8 70 aa10.7□□□□□ -0.7
SSPN-201ENST00000242729 UBE2DNLQ8IWF7 75 aa10.7□□□□□ -0.7
SSPN-201ENST00000242729 SPRR1AP35321 89 aa10.69□□□□□ -0.7
SSPN-201ENST00000242729 SMIM29Q86T20 159 aa10.68□□□□□ -0.7
SSPN-201ENST00000242729 RPS28P62857 69 aaKnown RBP10.67□□□□□ -0.7
SSPN-201ENST00000242729 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
SSPN-201ENST00000242729 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
SSPN-201ENST00000242729 KLKP1Q107X0 134 aa10.65□□□□□ -0.7
SSPN-201ENST00000242729 TMEM254Q8TBM7 123 aa10.65□□□□□ -0.7
SSPN-201ENST00000242729 PHF5AQ7RTV0 110 aaKnown RBP10.65□□□□□ -0.7
SSPN-201ENST00000242729 LINC00476Q8WZB0 136 aa10.65□□□□□ -0.71
SSPN-201ENST00000242729 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
SSPN-201ENST00000242729 TNP2Q05952 138 aa10.64□□□□□ -0.71
SSPN-201ENST00000242729 Q8NBF4 154 aa10.64□□□□□ -0.71
SSPN-201ENST00000242729 HRCT1Q6UXD1 115 aa10.64□□□□□ -0.71
SSPN-201ENST00000242729 PLECQ15149 4684 aaKnown RBP10.63□□□□□ -0.71
SSPN-201ENST00000242729 K7EQZ3 153 aa10.63□□□□□ -0.71
SSPN-201ENST00000242729 OCR1Q9BZK8 76 aa10.61□□□□□ -0.71
SSPN-201ENST00000242729 BCE1O60756 84 aa10.59□□□□□ -0.71
SSPN-201ENST00000242729 DSCR10P59022 87 aa10.59□□□□□ -0.71
SSPN-201ENST00000242729 Q5XG85 94 aa10.59□□□□□ -0.71
SSPN-201ENST00000242729 IGFL1Q6UW32 110 aa10.59□□□□□ -0.71
SSPN-201ENST00000242729 RPL37AP61513 92 aaKnown RBP10.58□□□□□ -0.72
SSPN-201ENST00000242729 A0A087WSZ3 146 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms