RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TRBV7-4A0A0J9YYF1 115 aa10.49□□□□□ -0.73
UBE3D-201ENST00000237186 DYNC2H1Q8NCM8 4307 aaKnown RBP10.49□□□□□ -0.73
UBE3D-201ENST00000237186 ATOX1O00244 68 aa10.48□□□□□ -0.73
UBE3D-201ENST00000237186 M0R2N4 97 aa10.45□□□□□ -0.74
UBE3D-201ENST00000237186 UQCRQO14949 82 aa10.44□□□□□ -0.74
UBE3D-201ENST00000237186 IGLV1-50A0A075B6I6 118 aa10.44□□□□□ -0.74
UBE3D-201ENST00000237186 KRTAP4-16G5E9R7 235 aaPredicted RBP10.44□□□□□ -0.74
UBE3D-201ENST00000237186 SPRR1AP35321 89 aa10.44□□□□□ -0.74
UBE3D-201ENST00000237186 C3orf22Q8N5N4 141 aa10.44□□□□□ -0.74
UBE3D-201ENST00000237186 PRYO14603 147 aa10.43□□□□□ -0.74
UBE3D-201ENST00000237186 KRTAP7-1Q8IUC3 87 aa10.43□□□□□ -0.74
UBE3D-201ENST00000237186 A0A087WVE0 104 aa10.42□□□□□ -0.74
UBE3D-201ENST00000237186 LOC107984640A0A0U1RRK4 108 aa10.42□□□□□ -0.74
UBE3D-201ENST00000237186 COX7CP15954 63 aa10.42□□□□□ -0.74
UBE3D-201ENST00000237186 B9D2Q9BPU9 175 aa10.42□□□□□ -0.74
UBE3D-201ENST00000237186 DHRS4-AS1Q9P1J3 65 aa10.41□□□□□ -0.74
UBE3D-201ENST00000237186 FAM168BA1KXE4 195 aa10.4□□□□□ -0.74
UBE3D-201ENST00000237186 Q6ZVQ6 151 aa10.4□□□□□ -0.74
UBE3D-201ENST00000237186 Q6ZRX8 168 aa10.4□□□□□ -0.75
UBE3D-201ENST00000237186 APLNQ9ULZ1 77 aa10.4□□□□□ -0.75
UBE3D-201ENST00000237186 KRTAP1-5Q9BYS1 174 aa10.38□□□□□ -0.75
UBE3D-201ENST00000237186 LINC01547P58512 204 aaPredicted RBP10.38□□□□□ -0.75
UBE3D-201ENST00000237186 MRPL55Q7Z7F7 128 aaKnown RBP10.38□□□□□ -0.75
UBE3D-201ENST00000237186 CNBPP62633 177 aaKnown RBP10.37□□□□□ -0.75
UBE3D-201ENST00000237186 CXCL6P80162 114 aa10.37□□□□□ -0.75
UBE3D-201ENST00000237186 FAM19A1Q7Z5A9 133 aa10.37□□□□□ -0.75
UBE3D-201ENST00000237186 Q8N377 158 aa10.37□□□□□ -0.75
UBE3D-201ENST00000237186 DNHD1Q96M86 4753 aa10.37□□□□□ -0.75
UBE3D-201ENST00000237186 STAB2Q8WWQ8 2551 aa10.36□□□□□ -0.75
UBE3D-201ENST00000237186 RPL37AP8A6NKH3 93 aa10.36□□□□□ -0.75
UBE3D-201ENST00000237186 SS18L2Q9UHA2 77 aa10.36□□□□□ -0.75
UBE3D-201ENST00000237186 DNAH10Q8IVF4 4471 aa10.36□□□□□ -0.75
UBE3D-201ENST00000237186 SERP2Q8N6R1 65 aa10.36□□□□□ -0.75
UBE3D-201ENST00000237186 Q9BRP9 147 aa10.36□□□□□ -0.75
UBE3D-201ENST00000237186 IGLV5-48A0A075B6I7 105 aa10.35□□□□□ -0.75
UBE3D-201ENST00000237186 C9orf153Q5TBE3 101 aa10.35□□□□□ -0.75
UBE3D-201ENST00000237186 ETDCA0A1B0GVM5 59 aa10.34□□□□□ -0.75
UBE3D-201ENST00000237186 CRYGAP11844 174 aa10.34□□□□□ -0.75
UBE3D-201ENST00000237186 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
UBE3D-201ENST00000237186 C16orf90A8MZG2 172 aa10.32□□□□□ -0.76
UBE3D-201ENST00000237186 HAMPP81172 84 aa10.32□□□□□ -0.76
UBE3D-201ENST00000237186 FAM19A5Q7Z5A7 132 aaPredicted RBP10.32□□□□□ -0.76
UBE3D-201ENST00000237186 BCE1O60756 84 aa10.32□□□□□ -0.76
UBE3D-201ENST00000237186 UBE2DNLQ8IWF7 75 aa10.32□□□□□ -0.76
UBE3D-201ENST00000237186 LYSTQ99698 3801 aa10.31□□□□□ -0.76
UBE3D-201ENST00000237186 A0A1B0GW54 56 aa10.3□□□□□ -0.76
UBE3D-201ENST00000237186 DEFB105AQ8NG35 78 aa10.3□□□□□ -0.76
UBE3D-201ENST00000237186 PLECQ15149 4684 aaKnown RBP10.3□□□□□ -0.76
UBE3D-201ENST00000237186 TNP2Q05952 138 aa10.3□□□□□ -0.76
UBE3D-201ENST00000237186 C14orf177Q52M58 125 aa10.3□□□□□ -0.76
UBE3D-201ENST00000237186 PSCAO43653 123 aa10.29□□□□□ -0.76
UBE3D-201ENST00000237186 REG3GQ6UW15 175 aa10.29□□□□□ -0.76
UBE3D-201ENST00000237186 A0A096LNI7 61 aa10.28□□□□□ -0.76
UBE3D-201ENST00000237186 ST20-AS1Q8NBB2 130 aa10.25□□□□□ -0.77
UBE3D-201ENST00000237186 A0A1W2PNN7 141 aa10.25□□□□□ -0.77
UBE3D-201ENST00000237186 ERC2-IT1O76042 136 aa10.25□□□□□ -0.77
UBE3D-201ENST00000237186 PRKDCP78527 4128 aaKnown RBP10.25□□□□□ -0.77
UBE3D-201ENST00000237186 NUPR2A6NF83 97 aa10.23□□□□□ -0.77
UBE3D-201ENST00000237186 UBE2BP63146 152 aa10.23□□□□□ -0.77
UBE3D-201ENST00000237186 NREPQ16612 68 aa10.23□□□□□ -0.77
UBE3D-201ENST00000237186 VPS13DQ5THJ4 4388 aa10.22□□□□□ -0.77
UBE3D-201ENST00000237186 CSMD3Q7Z407 3707 aa10.22□□□□□ -0.77
UBE3D-201ENST00000237186 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.77
UBE3D-201ENST00000237186 NBDYA0A0U1RRE5 68 aa10.21□□□□□ -0.77
UBE3D-201ENST00000237186 LRCOL1A6NCL2 159 aa10.21□□□□□ -0.77
UBE3D-201ENST00000237186 SMIM20Q8N5G0 67 aa10.21□□□□□ -0.77
UBE3D-201ENST00000237186 FUSP35637 526 aaKnown RBP eCLIP10.21□□□□□ -0.78
UBE3D-201ENST00000237186 KRTAP21-3Q3LHN1 58 aa10.21□□□□□ -0.78
UBE3D-201ENST00000237186 C1orf137Q5JT78 98 aa10.21□□□□□ -0.78
UBE3D-201ENST00000237186 DNAH7Q8WXX0 4024 aa10.21□□□□□ -0.78
UBE3D-201ENST00000237186 A0A1W2PNM2 257 aa10.2□□□□□ -0.78
UBE3D-201ENST00000237186 SMIM29Q86T20 159 aa10.2□□□□□ -0.78
UBE3D-201ENST00000237186 C9orf163Q8N9P6 203 aa10.2□□□□□ -0.78
UBE3D-201ENST00000237186 PKIGQ9Y2B9 76 aa10.2□□□□□ -0.78
UBE3D-201ENST00000237186 MEGF8Q7Z7M0 2845 aa10.2□□□□□ -0.78
UBE3D-201ENST00000237186 TRAV7A0A075B6U4 112 aa10.19□□□□□ -0.78
UBE3D-201ENST00000237186 Q8NBF4 154 aa10.19□□□□□ -0.78
UBE3D-201ENST00000237186 SPRR4Q96PI1 79 aa10.19□□□□□ -0.78
UBE3D-201ENST00000237186 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
UBE3D-201ENST00000237186 SCXQ7RTU7 201 aa10.18□□□□□ -0.78
UBE3D-201ENST00000237186 C3orf84H3BNL1 204 aa10.17□□□□□ -0.78
UBE3D-201ENST00000237186 Q6ZRN7 208 aaPredicted RBP10.17□□□□□ -0.78
UBE3D-201ENST00000237186 CYSTM1Q9H1C7 97 aa10.17□□□□□ -0.78
UBE3D-201ENST00000237186 H0Y9J4 135 aa10.15□□□□□ -0.79
UBE3D-201ENST00000237186 BPY2O14599 106 aa10.15□□□□□ -0.79
UBE3D-201ENST00000237186 IGKV4-1P06312 121 aa10.14□□□□□ -0.79
UBE3D-201ENST00000237186 TMEM258P61165 79 aa10.13□□□□□ -0.79
UBE3D-201ENST00000237186 LINC00474Q9P2X8 69 aa10.13□□□□□ -0.79
UBE3D-201ENST00000237186 IGLV8-61A0A075B6I0 122 aa10.13□□□□□ -0.79
UBE3D-201ENST00000237186 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
UBE3D-201ENST00000237186 PRLHP81277 87 aa10.13□□□□□ -0.79
UBE3D-201ENST00000237186 PHF5AQ7RTV0 110 aaKnown RBP10.12□□□□□ -0.79
UBE3D-201ENST00000237186 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
UBE3D-201ENST00000237186 LINC00476Q8WZB0 136 aa10.1□□□□□ -0.79
UBE3D-201ENST00000237186 F8WEM9 126 aa10.1□□□□□ -0.79
UBE3D-201ENST00000237186 TENM2Q9NT68 2774 aa10.1□□□□□ -0.79
UBE3D-201ENST00000237186 STARD9Q9P2P6 4700 aa10.09□□□□□ -0.79
UBE3D-201ENST00000237186 Q8N9L7 120 aa10.09□□□□□ -0.79
UBE3D-201ENST00000237186 SPRR1BP22528 89 aa10.08□□□□□ -0.8
UBE3D-201ENST00000237186 C20orf197Q8N268 126 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms