RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 Q6JHZ5 121 aa11□□□□□ -0.65
GAPDH-201ENST00000229239 Q6ZQY7 126 aa11□□□□□ -0.65
GAPDH-201ENST00000229239 KCNQ1DNQ9H478 68 aa11□□□□□ -0.65
GAPDH-201ENST00000229239 IGLV5-37A0A075B6J1 123 aa10.99□□□□□ -0.65
GAPDH-201ENST00000229239 LAMTOR3Q9UHA4 124 aa10.99□□□□□ -0.65
GAPDH-201ENST00000229239 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
GAPDH-201ENST00000229239 LINC00528Q8N1L1 170 aa10.98□□□□□ -0.65
GAPDH-201ENST00000229239 ATP5EP2Q5VTU8 51 aa10.97□□□□□ -0.65
GAPDH-201ENST00000229239 DSCR8Q96T75 97 aa10.96□□□□□ -0.65
GAPDH-201ENST00000229239 LOC107984640A0A0U1RRK4 108 aa10.94□□□□□ -0.66
GAPDH-201ENST00000229239 Q6ZQT0 140 aa10.94□□□□□ -0.66
GAPDH-201ENST00000229239 PLECQ15149 4684 aaKnown RBP10.93□□□□□ -0.66
GAPDH-201ENST00000229239 C7orf33Q8WU49 177 aa10.93□□□□□ -0.66
GAPDH-201ENST00000229239 APLNQ9ULZ1 77 aa10.93□□□□□ -0.66
GAPDH-201ENST00000229239 DNAH1Q9P2D7 4330 aa10.92□□□□□ -0.66
GAPDH-201ENST00000229239 PRYO14603 147 aa10.92□□□□□ -0.66
GAPDH-201ENST00000229239 SERTAD4-AS1Q5TG53 156 aa10.92□□□□□ -0.66
GAPDH-201ENST00000229239 UBL5Q9BZL1 73 aa10.92□□□□□ -0.66
GAPDH-201ENST00000229239 LCE6AA0A183 80 aa10.91□□□□□ -0.66
GAPDH-201ENST00000229239 UBE2DNLQ8IWF7 75 aa10.91□□□□□ -0.66
GAPDH-201ENST00000229239 FAM236AA0A1B0GUQ0 79 aa10.9□□□□□ -0.66
GAPDH-201ENST00000229239 FAM236BA0A1B0GV22 79 aa10.9□□□□□ -0.66
GAPDH-201ENST00000229239 C14orf177Q52M58 125 aa10.9□□□□□ -0.66
GAPDH-201ENST00000229239 DHRS4-AS1Q9P1J3 65 aa10.9□□□□□ -0.66
GAPDH-201ENST00000229239 NUPR2A6NF83 97 aa10.89□□□□□ -0.67
GAPDH-201ENST00000229239 CNBPP62633 177 aaKnown RBP10.88□□□□□ -0.67
GAPDH-201ENST00000229239 ALMS1Q8TCU4 4167 aa10.88□□□□□ -0.67
GAPDH-201ENST00000229239 IGLV1-50A0A075B6I6 118 aa10.87□□□□□ -0.67
GAPDH-201ENST00000229239 TRBV7-4A0A0J9YYF1 115 aa10.87□□□□□ -0.67
GAPDH-201ENST00000229239 SPRR1AP35321 89 aa10.87□□□□□ -0.67
GAPDH-201ENST00000229239 PKIGQ9Y2B9 76 aa10.87□□□□□ -0.67
GAPDH-201ENST00000229239 HYDINQ4G0P3 5121 aa10.86□□□□□ -0.67
GAPDH-201ENST00000229239 PSCAO43653 123 aa10.85□□□□□ -0.67
GAPDH-201ENST00000229239 HIST1H4AP62805 103 aaKnown RBP10.85□□□□□ -0.67
GAPDH-201ENST00000229239 KRTAP1-5Q9BYS1 174 aa10.85□□□□□ -0.67
GAPDH-201ENST00000229239 ATOX1O00244 68 aa10.84□□□□□ -0.67
GAPDH-201ENST00000229239 Q6ZRX8 168 aa10.84□□□□□ -0.67
GAPDH-201ENST00000229239 MRPL55Q7Z7F7 128 aaKnown RBP10.84□□□□□ -0.67
GAPDH-201ENST00000229239 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.68
GAPDH-201ENST00000229239 ETDCA0A1B0GVM5 59 aa10.83□□□□□ -0.68
GAPDH-201ENST00000229239 KRTAP4-16G5E9R7 235 aaPredicted RBP10.83□□□□□ -0.68
GAPDH-201ENST00000229239 FAM168BA1KXE4 195 aa10.82□□□□□ -0.68
GAPDH-201ENST00000229239 B5MCH6 92 aa10.82□□□□□ -0.68
GAPDH-201ENST00000229239 C16orf90A8MZG2 172 aa10.81□□□□□ -0.68
GAPDH-201ENST00000229239 KRTAP7-1Q8IUC3 87 aa10.81□□□□□ -0.68
GAPDH-201ENST00000229239 LINC00476Q8WZB0 136 aa10.79□□□□□ -0.68
GAPDH-201ENST00000229239 A0A1B0GW54 56 aa10.78□□□□□ -0.68
GAPDH-201ENST00000229239 FAM19A5Q7Z5A7 132 aaPredicted RBP10.78□□□□□ -0.68
GAPDH-201ENST00000229239 RPL37AP8A6NKH3 93 aa10.78□□□□□ -0.68
GAPDH-201ENST00000229239 LY6G6CO95867 125 aa10.77□□□□□ -0.69
GAPDH-201ENST00000229239 CXCL6P80162 114 aa10.77□□□□□ -0.69
GAPDH-201ENST00000229239 UQCRQO14949 82 aa10.76□□□□□ -0.69
GAPDH-201ENST00000229239 CCDC179H3BU77 68 aa10.76□□□□□ -0.69
GAPDH-201ENST00000229239 REG3GQ6UW15 175 aa10.76□□□□□ -0.69
GAPDH-201ENST00000229239 Q6ZVQ6 151 aa10.76□□□□□ -0.69
GAPDH-201ENST00000229239 IGLV5-48A0A075B6I7 105 aa10.75□□□□□ -0.69
GAPDH-201ENST00000229239 Q8N377 158 aa10.75□□□□□ -0.69
GAPDH-201ENST00000229239 NBDYA0A0U1RRE5 68 aa10.74□□□□□ -0.69
GAPDH-201ENST00000229239 A0A096LNI7 61 aa10.74□□□□□ -0.69
GAPDH-201ENST00000229239 C3orf22Q8N5N4 141 aa10.74□□□□□ -0.69
GAPDH-201ENST00000229239 Q9BRP9 147 aa10.74□□□□□ -0.69
GAPDH-201ENST00000229239 EPPK1P58107 5090 aaKnown RBP10.74□□□□□ -0.69
GAPDH-201ENST00000229239 LINC01547P58512 204 aaPredicted RBP10.73□□□□□ -0.69
GAPDH-201ENST00000229239 M0R2N4 97 aa10.72□□□□□ -0.69
GAPDH-201ENST00000229239 BCE1O60756 84 aa10.72□□□□□ -0.69
GAPDH-201ENST00000229239 COX7CP15954 63 aa10.72□□□□□ -0.69
GAPDH-201ENST00000229239 KMT2AQ03164 3969 aa10.71□□□□□ -0.69
GAPDH-201ENST00000229239 LINC00474Q9P2X8 69 aa10.71□□□□□ -0.69
GAPDH-201ENST00000229239 LRCOL1A6NCL2 159 aa10.7□□□□□ -0.7
GAPDH-201ENST00000229239 HAMPP81172 84 aa10.7□□□□□ -0.7
GAPDH-201ENST00000229239 DEFB105AQ8NG35 78 aa10.7□□□□□ -0.7
GAPDH-201ENST00000229239 VPS13DQ5THJ4 4388 aa10.69□□□□□ -0.7
GAPDH-201ENST00000229239 UBE2BP63146 152 aa10.69□□□□□ -0.7
GAPDH-201ENST00000229239 C9orf163Q8N9P6 203 aa10.69□□□□□ -0.7
GAPDH-201ENST00000229239 A0A087WVE0 104 aa10.68□□□□□ -0.7
GAPDH-201ENST00000229239 SERP2Q8N6R1 65 aa10.68□□□□□ -0.7
GAPDH-201ENST00000229239 BIRC6Q9NR09 4857 aa10.67□□□□□ -0.7
GAPDH-201ENST00000229239 IGKV2-24A0A0C4DH68 120 aa10.67□□□□□ -0.7
GAPDH-201ENST00000229239 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.7
GAPDH-201ENST00000229239 DNAH6Q9C0G6 4158 aa10.66□□□□□ -0.7
GAPDH-201ENST00000229239 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.66□□□□□ -0.7
GAPDH-201ENST00000229239 A0A1W2PNN7 141 aa10.66□□□□□ -0.7
GAPDH-201ENST00000229239 TNP2Q05952 138 aa10.66□□□□□ -0.7
GAPDH-201ENST00000229239 Q6ZRN7 208 aaPredicted RBP10.66□□□□□ -0.7
GAPDH-201ENST00000229239 C9orf153Q5TBE3 101 aa10.65□□□□□ -0.7
GAPDH-201ENST00000229239 FAM19A1Q7Z5A9 133 aa10.65□□□□□ -0.7
GAPDH-201ENST00000229239 SMIM20Q8N5G0 67 aa10.65□□□□□ -0.7
GAPDH-201ENST00000229239 H0Y9J4 135 aa10.64□□□□□ -0.71
GAPDH-201ENST00000229239 CRYGAP11844 174 aa10.64□□□□□ -0.71
GAPDH-201ENST00000229239 NREPQ16612 68 aa10.63□□□□□ -0.71
GAPDH-201ENST00000229239 ST20-AS1Q8NBB2 130 aa10.62□□□□□ -0.71
GAPDH-201ENST00000229239 DNAH10Q8IVF4 4471 aa10.62□□□□□ -0.71
GAPDH-201ENST00000229239 ERC2-IT1O76042 136 aa10.61□□□□□ -0.71
GAPDH-201ENST00000229239 C1orf137Q5JT78 98 aa10.61□□□□□ -0.71
GAPDH-201ENST00000229239 FRAS1Q86XX4 4008 aa10.61□□□□□ -0.71
GAPDH-201ENST00000229239 F8WEM9 126 aa10.61□□□□□ -0.71
GAPDH-201ENST00000229239 Q8NBF4 154 aa10.59□□□□□ -0.71
GAPDH-201ENST00000229239 SPRR4Q96PI1 79 aa10.58□□□□□ -0.72
GAPDH-201ENST00000229239 CHTF8P0CG12 524 aa10.56□□□□□ -0.72
GAPDH-201ENST00000229239 IGLV8-61A0A075B6I0 122 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms