RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 VPS13DQ5THJ4 4388 aa9.64□□□□□ -0.87
CCDC47-201ENST00000225726 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
CCDC47-201ENST00000225726 COX7CP15954 63 aa9.62□□□□□ -0.87
CCDC47-201ENST00000225726 C6orf99Q4VX62 202 aa9.62□□□□□ -0.87
CCDC47-201ENST00000225726 WWC2-AS2Q96NR7 200 aa9.62□□□□□ -0.87
CCDC47-201ENST00000225726 TRAV23DV6A0A075B6W5 121 aa9.62□□□□□ -0.87
CCDC47-201ENST00000225726 LRCOL1A6NCL2 159 aa9.62□□□□□ -0.87
CCDC47-201ENST00000225726 M0R2N4 97 aa9.61□□□□□ -0.87
CCDC47-201ENST00000225726 NKAPP1Q8N9T2 125 aa9.61□□□□□ -0.87
CCDC47-201ENST00000225726 DNAL4O96015 105 aa9.6□□□□□ -0.87
CCDC47-201ENST00000225726 SERTAD4-AS1Q5TG53 156 aa9.6□□□□□ -0.87
CCDC47-201ENST00000225726 IGLV5-37A0A075B6J1 123 aa9.6□□□□□ -0.87
CCDC47-201ENST00000225726 Q6ZR54 194 aa9.59□□□□□ -0.87
CCDC47-201ENST00000225726 DIRC1Q969H9 104 aa9.59□□□□□ -0.87
CCDC47-201ENST00000225726 BAALC-AS2P0C853 105 aa9.58□□□□□ -0.88
CCDC47-201ENST00000225726 TENM2Q9NT68 2774 aa9.58□□□□□ -0.88
CCDC47-201ENST00000225726 C20orf197Q8N268 126 aa9.58□□□□□ -0.88
CCDC47-201ENST00000225726 DNAH10Q8IVF4 4471 aa9.57□□□□□ -0.88
CCDC47-201ENST00000225726 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-201ENST00000225726 ZNF73O43830 326 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-201ENST00000225726 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
CCDC47-201ENST00000225726 Q8N814 137 aa9.57□□□□□ -0.88
CCDC47-201ENST00000225726 MPLKIPQ8TAP9 179 aa9.57□□□□□ -0.88
CCDC47-201ENST00000225726 TRBV7-6A0A0J9YX20 115 aa9.56□□□□□ -0.88
CCDC47-201ENST00000225726 Q5XG85 94 aa9.56□□□□□ -0.88
CCDC47-201ENST00000225726 LINC00575Q6W349 94 aa9.56□□□□□ -0.88
CCDC47-201ENST00000225726 C7orf33Q8WU49 177 aa9.56□□□□□ -0.88
CCDC47-201ENST00000225726 FAM168BA1KXE4 195 aa9.55□□□□□ -0.88
CCDC47-201ENST00000225726 C16orf90A8MZG2 172 aa9.55□□□□□ -0.88
CCDC47-201ENST00000225726 V9GYY9 64 aa9.55□□□□□ -0.88
CCDC47-201ENST00000225726 A0A096LNI7 61 aa9.54□□□□□ -0.88
CCDC47-201ENST00000225726 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
CCDC47-201ENST00000225726 COX7BP24311 80 aa9.54□□□□□ -0.88
CCDC47-201ENST00000225726 RBM3P98179 157 aaKnown RBP9.54□□□□□ -0.88
CCDC47-201ENST00000225726 KRTAP7-1Q8IUC3 87 aa9.54□□□□□ -0.88
CCDC47-201ENST00000225726 LY6G6CO95867 125 aa9.53□□□□□ -0.88
CCDC47-201ENST00000225726 KCNQ1DNQ9H478 68 aa9.53□□□□□ -0.88
CCDC47-201ENST00000225726 C14orf132Q9NPU4 83 aa9.53□□□□□ -0.88
CCDC47-201ENST00000225726 ORMDL1Q9P0S3 153 aa9.53□□□□□ -0.88
CCDC47-201ENST00000225726 ELOF1P60002 83 aaKnown RBP9.53□□□□□ -0.88
CCDC47-201ENST00000225726 C9orf163Q8N9P6 203 aa9.53□□□□□ -0.88
CCDC47-201ENST00000225726 C22orf24Q9Y442 160 aa9.52□□□□□ -0.88
CCDC47-201ENST00000225726 LINC00476Q8WZB0 136 aa9.52□□□□□ -0.89
CCDC47-201ENST00000225726 C3orf84H3BNL1 204 aa9.52□□□□□ -0.89
CCDC47-201ENST00000225726 LINC00643Q86TS7 51 aa9.52□□□□□ -0.89
CCDC47-201ENST00000225726 SNURFQ9Y675 71 aa9.52□□□□□ -0.89
CCDC47-201ENST00000225726 A0A087WTM6 91 aa9.51□□□□□ -0.89
CCDC47-201ENST00000225726 IGLV1-50A0A075B6I6 118 aa9.5□□□□□ -0.89
CCDC47-201ENST00000225726 MRPL55Q7Z7F7 128 aaKnown RBP9.5□□□□□ -0.89
CCDC47-201ENST00000225726 PRYO14603 147 aa9.5□□□□□ -0.89
CCDC47-201ENST00000225726 C1orf134Q5TEV5 83 aa9.5□□□□□ -0.89
CCDC47-201ENST00000225726 C1orf195Q5TG92 126 aa9.5□□□□□ -0.89
CCDC47-201ENST00000225726 LINC00474Q9P2X8 69 aa9.5□□□□□ -0.89
CCDC47-201ENST00000225726 IGKV2-24A0A0C4DH68 120 aa9.5□□□□□ -0.89
CCDC47-201ENST00000225726 ATOX1O00244 68 aa9.49□□□□□ -0.89
CCDC47-201ENST00000225726 DNAH6Q9C0G6 4158 aa9.48□□□□□ -0.89
CCDC47-201ENST00000225726 PRO0628Q9UI54 55 aa9.48□□□□□ -0.89
CCDC47-201ENST00000225726 RPL37AP8A6NKH3 93 aa9.47□□□□□ -0.89
CCDC47-201ENST00000225726 LINC00528Q8N1L1 170 aa9.47□□□□□ -0.89
CCDC47-201ENST00000225726 TMEM256-PLSCR3K7ERE1 68 aa9.47□□□□□ -0.89
CCDC47-201ENST00000225726 ALMS1Q8TCU4 4167 aa9.46□□□□□ -0.89
CCDC47-201ENST00000225726 CRYGAP11844 174 aa9.46□□□□□ -0.89
CCDC47-201ENST00000225726 TMEM258P61165 79 aa9.46□□□□□ -0.89
CCDC47-201ENST00000225726 A0A1W2PNN7 141 aa9.46□□□□□ -0.9
CCDC47-201ENST00000225726 GHRHP01286 108 aa9.46□□□□□ -0.9
CCDC47-201ENST00000225726 H3BQ85 93 aa9.45□□□□□ -0.9
CCDC47-201ENST00000225726 SPRR1AP35321 89 aa9.45□□□□□ -0.9
CCDC47-201ENST00000225726 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-201ENST00000225726 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
CCDC47-201ENST00000225726 INAFM2P0DMQ5 153 aa9.44□□□□□ -0.9
CCDC47-201ENST00000225726 SERP2Q8N6R1 65 aa9.44□□□□□ -0.9
CCDC47-201ENST00000225726 OBSCN-AS1Q96MR7 158 aa9.44□□□□□ -0.9
CCDC47-201ENST00000225726 Q6ZQY7 126 aa9.44□□□□□ -0.9
CCDC47-201ENST00000225726 KRTAP4-16G5E9R7 235 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-201ENST00000225726 TGP01266 2768 aa9.42□□□□□ -0.9
CCDC47-201ENST00000225726 KMT2AQ03164 3969 aa9.42□□□□□ -0.9
CCDC47-201ENST00000225726 ETDCA0A1B0GVM5 59 aa9.42□□□□□ -0.9
CCDC47-201ENST00000225726 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
CCDC47-201ENST00000225726 RTL8CO15255 209 aa9.41□□□□□ -0.9
CCDC47-201ENST00000225726 RPS28P62857 69 aaKnown RBP9.41□□□□□ -0.9
CCDC47-201ENST00000225726 REG3GQ6UW15 175 aa9.41□□□□□ -0.9
CCDC47-201ENST00000225726 Q6ZRX8 168 aa9.41□□□□□ -0.9
CCDC47-201ENST00000225726 LINC00846Q9NV44 126 aa9.41□□□□□ -0.9
CCDC47-201ENST00000225726 DHRS4-AS1Q9P1J3 65 aa9.4□□□□□ -0.9
CCDC47-201ENST00000225726 JMJD7-PLA2G4BH0Y9G9 81 aa9.39□□□□□ -0.91
CCDC47-201ENST00000225726 FAM240AA0A1B0GVK7 77 aa9.39□□□□□ -0.91
CCDC47-201ENST00000225726 IMUPQ9GZP8 106 aa9.38□□□□□ -0.91
CCDC47-201ENST00000225726 SPACA4Q8TDM5 124 aa9.38□□□□□ -0.91
CCDC47-201ENST00000225726 DNAH2Q9P225 4427 aa9.38□□□□□ -0.91
CCDC47-201ENST00000225726 PANO1I0J062 215 aa9.37□□□□□ -0.91
CCDC47-201ENST00000225726 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
CCDC47-201ENST00000225726 IGLV5-52A0A0A0MRZ9 124 aa9.36□□□□□ -0.91
CCDC47-201ENST00000225726 Q9BRP9 147 aa9.36□□□□□ -0.91
CCDC47-201ENST00000225726 ACYP1P07311 99 aa9.36□□□□□ -0.91
CCDC47-201ENST00000225726 TNP2Q05952 138 aa9.36□□□□□ -0.91
CCDC47-201ENST00000225726 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-201ENST00000225726 EPM2AB3EWF7 344 aa9.35□□□□□ -0.91
CCDC47-201ENST00000225726 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC47-201ENST00000225726 UBE2BP63146 152 aa9.35□□□□□ -0.91
CCDC47-201ENST00000225726 LAMTOR3Q9UHA4 124 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms