RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 IGLV6-57P01721 117 aa8.64□□□□□ -1.03
SUPT4H1-201ENST00000225504 SPRR1AP35321 89 aa8.64□□□□□ -1.03
SUPT4H1-201ENST00000225504 KRTAP10-8P60410 259 aa8.64□□□□□ -1.03
SUPT4H1-201ENST00000225504 PYY3Q5JQD4 70 aa8.64□□□□□ -1.03
SUPT4H1-201ENST00000225504 PAM16Q9Y3D7 125 aa8.64□□□□□ -1.03
SUPT4H1-201ENST00000225504 KRTAP4-16G5E9R7 235 aaPredicted RBP8.64□□□□□ -1.03
SUPT4H1-201ENST00000225504 COX8AP10176 69 aa8.64□□□□□ -1.03
SUPT4H1-201ENST00000225504 S100A7L2Q5SY68 101 aa8.64□□□□□ -1.03
SUPT4H1-201ENST00000225504 C14orf144Q96I85 54 aa8.64□□□□□ -1.03
SUPT4H1-201ENST00000225504 SPATA45Q537H7 98 aa8.63□□□□□ -1.03
SUPT4H1-201ENST00000225504 IFITM1P13164 125 aa8.62□□□□□ -1.03
SUPT4H1-201ENST00000225504 Q6ZVH6 145 aa8.62□□□□□ -1.03
SUPT4H1-201ENST00000225504 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
SUPT4H1-201ENST00000225504 VAMP8Q9BV40 100 aa8.62□□□□□ -1.03
SUPT4H1-201ENST00000225504 LINC00337Q8N6G1 96 aa8.61□□□□□ -1.03
SUPT4H1-201ENST00000225504 OR13C6PQ8NH95 151 aa8.61□□□□□ -1.03
SUPT4H1-201ENST00000225504 ANAPC11Q9NYG5 84 aa8.6□□□□□ -1.03
SUPT4H1-201ENST00000225504 ETDCA0A1B0GVM5 59 aa8.59□□□□□ -1.03
SUPT4H1-201ENST00000225504 B5MCH6 92 aa8.59□□□□□ -1.03
SUPT4H1-201ENST00000225504 HIGD2AQ9BW72 106 aa8.59□□□□□ -1.03
SUPT4H1-201ENST00000225504 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
SUPT4H1-201ENST00000225504 TRAV23DV6A0A075B6W5 121 aa8.58□□□□□ -1.04
SUPT4H1-201ENST00000225504 PCP4L1A6NKN8 68 aa8.58□□□□□ -1.04
SUPT4H1-201ENST00000225504 DLEU1O43261 78 aa8.58□□□□□ -1.04
SUPT4H1-201ENST00000225504 TNXBP22105 4242 aa8.57□□□□□ -1.04
SUPT4H1-201ENST00000225504 SMCR5Q8TEV8 140 aa8.57□□□□□ -1.04
SUPT4H1-201ENST00000225504 COPS9Q8WXC6 57 aa8.57□□□□□ -1.04
SUPT4H1-201ENST00000225504 ZNF73O43830 326 aaPredicted RBP8.56□□□□□ -1.04
SUPT4H1-201ENST00000225504 A0A087X002 238 aa8.55□□□□□ -1.04
SUPT4H1-201ENST00000225504 A4D1N5 150 aa8.55□□□□□ -1.04
SUPT4H1-201ENST00000225504 ERC2-IT1O76042 136 aa8.55□□□□□ -1.04
SUPT4H1-201ENST00000225504 SLC25A34Q6PIV7 304 aa8.55□□□□□ -1.04
SUPT4H1-201ENST00000225504 Q9BRP9 147 aa8.55□□□□□ -1.04
SUPT4H1-201ENST00000225504 A6NDN8 102 aa8.54□□□□□ -1.04
SUPT4H1-201ENST00000225504 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
SUPT4H1-201ENST00000225504 HIST1H4GQ99525 98 aa8.54□□□□□ -1.04
SUPT4H1-201ENST00000225504 Q6ZRX8 168 aa8.53□□□□□ -1.04
SUPT4H1-201ENST00000225504 LCE2AQ5TA79 106 aaPredicted RBP8.52□□□□□ -1.05
SUPT4H1-201ENST00000225504 SPRR4Q96PI1 79 aa8.51□□□□□ -1.05
SUPT4H1-201ENST00000225504 HIGD1BQ9P298 99 aa8.51□□□□□ -1.05
SUPT4H1-201ENST00000225504 C6orf99Q4VX62 202 aa8.51□□□□□ -1.05
SUPT4H1-201ENST00000225504 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
SUPT4H1-201ENST00000225504 CRYGAP11844 174 aa8.5□□□□□ -1.05
SUPT4H1-201ENST00000225504 C12orf57Q99622 126 aa8.5□□□□□ -1.05
SUPT4H1-201ENST00000225504 TRAV13-2A0A0B4J235 113 aa8.49□□□□□ -1.05
SUPT4H1-201ENST00000225504 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
SUPT4H1-201ENST00000225504 SMIM11BQ8TCY0 68 aa8.48□□□□□ -1.05
SUPT4H1-201ENST00000225504 RPL13AP40429 203 aaKnown RBP8.47□□□□□ -1.05
SUPT4H1-201ENST00000225504 HINT1P49773 126 aaPredicted RBP8.47□□□□□ -1.05
SUPT4H1-201ENST00000225504 COX7BP24311 80 aa8.46□□□□□ -1.05
SUPT4H1-201ENST00000225504 ELOF1P60002 83 aaKnown RBP8.46□□□□□ -1.05
SUPT4H1-201ENST00000225504 C3orf22Q8N5N4 141 aa8.46□□□□□ -1.05
SUPT4H1-201ENST00000225504 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.05
SUPT4H1-201ENST00000225504 GAGE2AQ6NT46 116 aa8.45□□□□□ -1.06
SUPT4H1-201ENST00000225504 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
SUPT4H1-201ENST00000225504 ZNF706Q9Y5V0 76 aaPredicted RBP8.45□□□□□ -1.06
SUPT4H1-201ENST00000225504 CFC1BP0CG36 223 aa8.45□□□□□ -1.06
SUPT4H1-201ENST00000225504 CFC1P0CG37 223 aa8.45□□□□□ -1.06
SUPT4H1-201ENST00000225504 TAL2Q16559 108 aa8.44□□□□□ -1.06
SUPT4H1-201ENST00000225504 CEND1Q8N111 149 aa8.44□□□□□ -1.06
SUPT4H1-201ENST00000225504 TRBV7-6A0A0J9YX20 115 aa8.43□□□□□ -1.06
SUPT4H1-201ENST00000225504 LINC00483Q53H64 154 aa8.43□□□□□ -1.06
SUPT4H1-201ENST00000225504 PRO1933Q9H354 126 aa8.42□□□□□ -1.06
SUPT4H1-201ENST00000225504 DHRS4-AS1Q9P1J3 65 aa8.42□□□□□ -1.06
SUPT4H1-201ENST00000225504 A0A1B0GWB2 263 aa8.41□□□□□ -1.06
SUPT4H1-201ENST00000225504 FXYD2P54710 66 aa8.41□□□□□ -1.06
SUPT4H1-201ENST00000225504 UQCR10Q9UDW1 63 aa8.41□□□□□ -1.06
SUPT4H1-201ENST00000225504 H7C2G1 150 aa8.4□□□□□ -1.06
SUPT4H1-201ENST00000225504 HMCN2Q8NDA2 5059 aa8.4□□□□□ -1.06
SUPT4H1-201ENST00000225504 TSPAN13O95857 204 aa8.39□□□□□ -1.07
SUPT4H1-201ENST00000225504 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
SUPT4H1-201ENST00000225504 RAB37Q96AX2 223 aa8.38□□□□□ -1.07
SUPT4H1-201ENST00000225504 KRTAP4-6Q9BYQ5 205 aa8.38□□□□□ -1.07
SUPT4H1-201ENST00000225504 A0A0B4J2C4 111 aa8.38□□□□□ -1.07
SUPT4H1-201ENST00000225504 HSD52Q0P140 79 aa8.38□□□□□ -1.07
SUPT4H1-201ENST00000225504 SMIM6P0DI80 62 aa8.37□□□□□ -1.07
SUPT4H1-201ENST00000225504 DEFB105AQ8NG35 78 aa8.37□□□□□ -1.07
SUPT4H1-201ENST00000225504 IGLV9-49A0A0B4J1Y8 123 aa8.36□□□□□ -1.07
SUPT4H1-201ENST00000225504 VAMP3Q15836 100 aa8.36□□□□□ -1.07
SUPT4H1-201ENST00000225504 SPRR1BP22528 89 aa8.35□□□□□ -1.07
SUPT4H1-201ENST00000225504 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
SUPT4H1-201ENST00000225504 LINC00304Q8N9R0 145 aa8.35□□□□□ -1.07
SUPT4H1-201ENST00000225504 LINC01547P58512 204 aaPredicted RBP8.34□□□□□ -1.07
SUPT4H1-201ENST00000225504 MOBPQ13875 183 aa8.34□□□□□ -1.07
SUPT4H1-201ENST00000225504 PRO1854Q9UHT4 67 aa8.34□□□□□ -1.07
SUPT4H1-201ENST00000225504 Q8NBF4 154 aa8.33□□□□□ -1.08
SUPT4H1-201ENST00000225504 NHP2Q9NX24 153 aaKnown RBP8.33□□□□□ -1.08
SUPT4H1-201ENST00000225504 K7ERJ3 54 aa8.32□□□□□ -1.08
SUPT4H1-201ENST00000225504 BVES-AS1Q5T3Y7 98 aa8.32□□□□□ -1.08
SUPT4H1-201ENST00000225504 IGLV5-48A0A075B6I7 105 aa8.31□□□□□ -1.08
SUPT4H1-201ENST00000225504 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
SUPT4H1-201ENST00000225504 hADV29S1A0JD25 119 aa8.31□□□□□ -1.08
SUPT4H1-201ENST00000225504 SMIM29Q86T20 159 aa8.31□□□□□ -1.08
SUPT4H1-201ENST00000225504 SLC25A20O43772 301 aa8.3□□□□□ -1.08
SUPT4H1-201ENST00000225504 Q1RN00 199 aa8.3□□□□□ -1.08
SUPT4H1-201ENST00000225504 SSBP3-AS1Q7Z2R9 100 aa8.3□□□□□ -1.08
SUPT4H1-201ENST00000225504 Q8N377 158 aa8.3□□□□□ -1.08
SUPT4H1-201ENST00000225504 C9orf153Q5TBE3 101 aa8.29□□□□□ -1.08
SUPT4H1-201ENST00000225504 Q6ZQY7 126 aa8.28□□□□□ -1.08
SUPT4H1-201ENST00000225504 FAM218AQ96MZ4 157 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms