RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 GVQW2A0A096LPI5 108 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-229ENST00000641891 XAGE1AQ9HD64 81 aa11.31□□□□□ -0.6
PHGDH-229ENST00000641891 S100A7L2Q5SY68 101 aa11.3□□□□□ -0.6
PHGDH-229ENST00000641891 C15orf56Q8N910 161 aa11.3□□□□□ -0.6
PHGDH-229ENST00000641891 MRAPQ8TCY5 172 aa11.3□□□□□ -0.6
PHGDH-229ENST00000641891 ZNF561-AS1K7EIQ3 104 aa11.3□□□□□ -0.6
PHGDH-229ENST00000641891 RPL18AQ02543 176 aaKnown RBP11.3□□□□□ -0.6
PHGDH-229ENST00000641891 C6orf99Q4VX62 202 aa11.3□□□□□ -0.6
PHGDH-229ENST00000641891 A0A1B0GV72 72 aa11.28□□□□□ -0.6
PHGDH-229ENST00000641891 LINC01556Q5JQF7 62 aa11.28□□□□□ -0.6
PHGDH-229ENST00000641891 MUC7Q8TAX7 377 aa11.28□□□□□ -0.6
PHGDH-229ENST00000641891 CAMK2N2Q96S95 79 aa11.28□□□□□ -0.6
PHGDH-229ENST00000641891 NOTCH1P46531 2555 aa11.28□□□□□ -0.6
PHGDH-229ENST00000641891 K7EIL1 84 aa11.27□□□□□ -0.6
PHGDH-229ENST00000641891 Q6ZRU5 148 aa11.27□□□□□ -0.6
PHGDH-229ENST00000641891 SMCR5Q8TEV8 140 aa11.27□□□□□ -0.6
PHGDH-229ENST00000641891 IGKV2D-24A0A075B6R9 120 aa11.27□□□□□ -0.61
PHGDH-229ENST00000641891 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.61
PHGDH-229ENST00000641891 Q8N814 137 aa11.27□□□□□ -0.61
PHGDH-229ENST00000641891 C1orf43Q9BWL3 253 aa11.27□□□□□ -0.61
PHGDH-229ENST00000641891 C14orf132Q9NPU4 83 aa11.27□□□□□ -0.61
PHGDH-229ENST00000641891 ORMDL1Q9P0S3 153 aa11.27□□□□□ -0.61
PHGDH-229ENST00000641891 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
PHGDH-229ENST00000641891 GAGE2EQ4V326 116 aa11.26□□□□□ -0.61
PHGDH-229ENST00000641891 GAGE2AQ6NT46 116 aa11.26□□□□□ -0.61
PHGDH-229ENST00000641891 GAGE2DQ9UEU5 116 aa11.26□□□□□ -0.61
PHGDH-229ENST00000641891 LINC00167Q96N53 147 aa11.26□□□□□ -0.61
PHGDH-229ENST00000641891 ACYP1P07311 99 aa11.25□□□□□ -0.61
PHGDH-229ENST00000641891 TM2D3Q9BRN9 247 aa11.25□□□□□ -0.61
PHGDH-229ENST00000641891 COL6A5A8TX70 2615 aa11.25□□□□□ -0.61
PHGDH-229ENST00000641891 IGLV6-57P01721 117 aa11.24□□□□□ -0.61
PHGDH-229ENST00000641891 OBSCN-AS1Q96MR7 158 aa11.24□□□□□ -0.61
PHGDH-229ENST00000641891 TRAV10A0A0B4J240 114 aa11.23□□□□□ -0.61
PHGDH-229ENST00000641891 TRBV10-3A0A0K0K1G6 114 aa11.22□□□□□ -0.61
PHGDH-229ENST00000641891 A0A1B0GX51 115 aa11.22□□□□□ -0.61
PHGDH-229ENST00000641891 LINC00588Q9Y4M8 146 aa11.22□□□□□ -0.61
PHGDH-229ENST00000641891 DNAH10OSP0CZ25 163 aa11.21□□□□□ -0.61
PHGDH-229ENST00000641891 HUWE1Q7Z6Z7 4374 aaKnown RBP11.21□□□□□ -0.61
PHGDH-229ENST00000641891 LINC00575Q6W349 94 aa11.21□□□□□ -0.62
PHGDH-229ENST00000641891 C2orf48Q96LS8 159 aa11.2□□□□□ -0.62
PHGDH-229ENST00000641891 Q6Q795 121 aa11.19□□□□□ -0.62
PHGDH-229ENST00000641891 VPREB1P12018 145 aa11.18□□□□□ -0.62
PHGDH-229ENST00000641891 SDIM1Q6ZPB5 146 aa11.18□□□□□ -0.62
PHGDH-229ENST00000641891 NBEAL1Q6ZS30 2694 aa11.18□□□□□ -0.62
PHGDH-229ENST00000641891 TRAV23DV6A0A075B6W5 121 aa11.17□□□□□ -0.62
PHGDH-229ENST00000641891 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
PHGDH-229ENST00000641891 Q6ZRP5 223 aa11.17□□□□□ -0.62
PHGDH-229ENST00000641891 ANAPC13Q9BS18 74 aa11.17□□□□□ -0.62
PHGDH-229ENST00000641891 hADV29S1A0JD25 119 aa11.16□□□□□ -0.62
PHGDH-229ENST00000641891 NDUFV3P56181 108 aaKnown RBP11.16□□□□□ -0.62
PHGDH-229ENST00000641891 CASC10Q5T4H9 136 aa11.16□□□□□ -0.62
PHGDH-229ENST00000641891 TRBV7-7A0A0K0K1E9 115 aa11.16□□□□□ -0.62
PHGDH-229ENST00000641891 TMEM256-PLSCR3K7ERE1 68 aa11.15□□□□□ -0.62
PHGDH-229ENST00000641891 SYCNQ0VAF6 134 aa11.15□□□□□ -0.62
PHGDH-229ENST00000641891 LINC00643Q86TS7 51 aa11.15□□□□□ -0.62
PHGDH-229ENST00000641891 NHLRC4P0CG21 123 aaPredicted RBP11.14□□□□□ -0.63
PHGDH-229ENST00000641891 DIRC1Q969H9 104 aa11.14□□□□□ -0.63
PHGDH-229ENST00000641891 ZNF73O43830 326 aaPredicted RBP11.13□□□□□ -0.63
PHGDH-229ENST00000641891 LINC00846Q9NV44 126 aa11.12□□□□□ -0.63
PHGDH-229ENST00000641891 M0R378 163 aa11.11□□□□□ -0.63
PHGDH-229ENST00000641891 DNAH1Q9P2D7 4330 aa11.1□□□□□ -0.63
PHGDH-229ENST00000641891 Q6ZQY7 126 aa11.1□□□□□ -0.63
PHGDH-229ENST00000641891 JMJD7-PLA2G4BH0Y9G9 81 aa11.1□□□□□ -0.63
PHGDH-229ENST00000641891 USP17L23D6RBM5 183 aa11.09□□□□□ -0.63
PHGDH-229ENST00000641891 CCKP06307 115 aa11.09□□□□□ -0.63
PHGDH-229ENST00000641891 F8WDY8 70 aa11.09□□□□□ -0.63
PHGDH-229ENST00000641891 COX7BP24311 80 aa11.09□□□□□ -0.63
PHGDH-229ENST00000641891 ELOF1P60002 83 aaKnown RBP11.07□□□□□ -0.64
PHGDH-229ENST00000641891 SERTAD4-AS1Q5TG53 156 aa11.07□□□□□ -0.64
PHGDH-229ENST00000641891 MDFIQ99750 246 aa11.06□□□□□ -0.64
PHGDH-229ENST00000641891 IMUPQ9GZP8 106 aa11.06□□□□□ -0.64
PHGDH-229ENST00000641891 LAMTOR3Q9UHA4 124 aa11.05□□□□□ -0.64
PHGDH-229ENST00000641891 FAM236AA0A1B0GUQ0 79 aa11.04□□□□□ -0.64
PHGDH-229ENST00000641891 FAM236BA0A1B0GV22 79 aa11.04□□□□□ -0.64
PHGDH-229ENST00000641891 MGAM2Q2M2H8 2515 aa11.04□□□□□ -0.64
PHGDH-229ENST00000641891 IGKV3D-7A0A0C4DH55 119 aa11.04□□□□□ -0.64
PHGDH-229ENST00000641891 UPK3BQ9BT76 320 aa11.04□□□□□ -0.64
PHGDH-229ENST00000641891 COL7A1Q02388 2944 aa11.02□□□□□ -0.65
PHGDH-229ENST00000641891 TRBV7-6A0A0J9YX20 115 aa11.02□□□□□ -0.65
PHGDH-229ENST00000641891 FAM168BA1KXE4 195 aa11.01□□□□□ -0.65
PHGDH-229ENST00000641891 RBM3P98179 157 aaKnown RBP11.01□□□□□ -0.65
PHGDH-229ENST00000641891 NKAPP1Q8N9T2 125 aa11.01□□□□□ -0.65
PHGDH-229ENST00000641891 LYSTQ99698 3801 aa11.01□□□□□ -0.65
PHGDH-229ENST00000641891 TLX1NBP0CAT3 122 aa11.01□□□□□ -0.65
PHGDH-229ENST00000641891 LINC00528Q8N1L1 170 aa11.01□□□□□ -0.65
PHGDH-229ENST00000641891 C7orf33Q8WU49 177 aa11.01□□□□□ -0.65
PHGDH-229ENST00000641891 RMI2Q96E14 147 aa11.01□□□□□ -0.65
PHGDH-229ENST00000641891 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11□□□□□ -0.65
PHGDH-229ENST00000641891 Q6ZQT0 140 aa11□□□□□ -0.65
PHGDH-229ENST00000641891 KRTAP1-5Q9BYS1 174 aa11□□□□□ -0.65
PHGDH-229ENST00000641891 CCDC179H3BU77 68 aa11□□□□□ -0.65
PHGDH-229ENST00000641891 M0R2N4 97 aa11□□□□□ -0.65
PHGDH-229ENST00000641891 Q6JHZ5 121 aa11□□□□□ -0.65
PHGDH-229ENST00000641891 DNAH9Q9NYC9 4486 aa10.98□□□□□ -0.65
PHGDH-229ENST00000641891 LOC110117498A0A087WWA1 95 aa10.97□□□□□ -0.65
PHGDH-229ENST00000641891 KRTAP7-1Q8IUC3 87 aa10.97□□□□□ -0.65
PHGDH-229ENST00000641891 KCNQ1DNQ9H478 68 aa10.97□□□□□ -0.65
PHGDH-229ENST00000641891 RPL37AP8A6NKH3 93 aa10.96□□□□□ -0.65
PHGDH-229ENST00000641891 DSCR8Q96T75 97 aa10.94□□□□□ -0.66
PHGDH-229ENST00000641891 A0A087WVE0 104 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms