RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	NTM-AS1	Q6ZSK4	140 aa		3.96	□□□□□ -1.78
CASC19-238	ENST00000641523	ERG28	Q9UKR5	140 aa		3.96	□□□□□ -1.78
CASC19-238	ENST00000641523	TRAV9-1	A0A075B6T8	112 aa		3.95	□□□□□ -1.78
CASC19-238	ENST00000641523		A0A1B0GVX0	72 aa		3.95	□□□□□ -1.78
CASC19-238	ENST00000641523		K7ERU9	68 aa		3.95	□□□□□ -1.78
CASC19-238	ENST00000641523	NTF3	P20783	257 aa		3.95	□□□□□ -1.78
CASC19-238	ENST00000641523	LINC01551	Q86U37	167 aa		3.95	□□□□□ -1.78
CASC19-238	ENST00000641523	CIRBP-AS1	Q8TBR5	109 aa		3.95	□□□□□ -1.78
CASC19-238	ENST00000641523	TP73-AS1	Q9UF72	201 aa		3.95	□□□□□ -1.78
CASC19-238	ENST00000641523	LAMTOR2	Q9Y2Q5	125 aa		3.95	□□□□□ -1.78
CASC19-238	ENST00000641523	LINC00862	A6NCI5	91 aa		3.94	□□□□□ -1.78
CASC19-238	ENST00000641523		A8MWL6	223 aa		3.94	□□□□□ -1.78
CASC19-238	ENST00000641523	CNBP	P62633	177 aa	Known RBP	3.94	□□□□□ -1.78
CASC19-238	ENST00000641523	LUZP6	Q538Z0	58 aa		3.94	□□□□□ -1.78
CASC19-238	ENST00000641523	LYRM7	Q5U5X0	104 aa		3.94	□□□□□ -1.78
CASC19-238	ENST00000641523	CLPSL2	Q6UWE3	100 aa		3.94	□□□□□ -1.78
CASC19-238	ENST00000641523	C9orf163	Q8N9P6	203 aa		3.94	□□□□□ -1.78
CASC19-238	ENST00000641523	IMUP	Q9GZP8	106 aa		3.94	□□□□□ -1.78
CASC19-238	ENST00000641523	LAMTOR3	Q9UHA4	124 aa		3.94	□□□□□ -1.78
CASC19-238	ENST00000641523	IGHV3-64	A0A075B6Q5	118 aa		3.93	□□□□□ -1.78
CASC19-238	ENST00000641523	SCO1	O75880	301 aa		3.93	□□□□□ -1.78
CASC19-238	ENST00000641523	APCS	P02743	223 aa		3.93	□□□□□ -1.78
CASC19-238	ENST00000641523	TLX1NB	P0CAT3	122 aa		3.93	□□□□□ -1.78
CASC19-238	ENST00000641523	AMMECR1L	Q6DCA0	310 aa		3.93	□□□□□ -1.78
CASC19-238	ENST00000641523	TOMM6	Q96B49	74 aa		3.93	□□□□□ -1.78
CASC19-238	ENST00000641523	RPL37A	P61513	92 aa	Known RBP	3.93	□□□□□ -1.78
CASC19-238	ENST00000641523	C9orf129	Q5T035	196 aa	Known RBP	3.93	□□□□□ -1.78
CASC19-238	ENST00000641523	KTN1-AS1	Q86SY8	53 aa		3.93	□□□□□ -1.78
CASC19-238	ENST00000641523	IGLV10-54	A0A075B6I4	117 aa		3.92	□□□□□ -1.78
CASC19-238	ENST00000641523	PPP1R17	O96001	155 aa		3.92	□□□□□ -1.78
CASC19-238	ENST00000641523	KRTAP26-1	Q6PEX3	210 aa		3.92	□□□□□ -1.78
CASC19-238	ENST00000641523	C15orf56	Q8N910	161 aa		3.92	□□□□□ -1.78
CASC19-238	ENST00000641523	SMIM7	Q9BQ49	75 aa		3.92	□□□□□ -1.78
CASC19-238	ENST00000641523	IGLV4-60	A0A075B6I1	120 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	TRBV6-5	A0A0K0K1A5	114 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523		A0A1B0GUT8	65 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	SDHAF1	A6NFY7	115 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523		I3L3M4	83 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	BPY2	O14599	106 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	SRP19	P09132	144 aa	Known RBP	3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	FOXA3	P55318	350 aa	Predicted RBP	3.91	□□□□□ -1.78
CASC19-238	ENST00000641523		Q5XG85	94 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	ALKAL2	Q6UX46	152 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	SDIM1	Q6ZPB5	146 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	TSKU	Q8WUA8	353 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	ST20	Q9HBF5	79 aa		3.91	□□□□□ -1.78
CASC19-238	ENST00000641523	ZNF727	A8MUV8	499 aa		3.9	□□□□□ -1.78
CASC19-238	ENST00000641523	ZNF73	O43830	326 aa	Predicted RBP	3.9	□□□□□ -1.78
CASC19-238	ENST00000641523	CIRBP	Q14011	172 aa	Known RBP	3.9	□□□□□ -1.78
CASC19-238	ENST00000641523	DPH3	Q96FX2	82 aa		3.9	□□□□□ -1.78
CASC19-238	ENST00000641523	TMEM191A	Q9H0A3	160 aa		3.9	□□□□□ -1.78
CASC19-238	ENST00000641523	OSTC	Q9NRP0	149 aa		3.9	□□□□□ -1.78
CASC19-238	ENST00000641523	LINC00474	Q9P2X8	69 aa		3.9	□□□□□ -1.78
CASC19-238	ENST00000641523	NAT8B	Q9UHF3	227 aa		3.9	□□□□□ -1.78
CASC19-238	ENST00000641523	HIGD1C	A8MV81	97 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523		J3QQQ9	107 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	TRGC2	P03986	189 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	RPS10	P46783	165 aa	Known RBP	3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	OCIAD2	Q56VL3	154 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	LCA10	Q71F78	164 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	PRR15	Q8IV56	129 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	DAND5	Q8N907	189 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	RPL39L	Q96EH5	51 aa	Known RBP	3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	IGKV3OR2-268	A0A0C4DH90	116 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	TRBV27	A0A0K0K1C4	114 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	LOC107984640	A0A0U1RRK4	108 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	C7orf77	A4D0Y5	90 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	TAX1BP3	O14907	124 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	CCL25	O15444	150 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	S100A8	P05109	93 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	FCER1G	P30273	86 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	KRTAP10-4	P60372	401 aa	Predicted RBP	3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	SS18	Q15532	418 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	SLC25A34	Q6PIV7	304 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	SPACA4	Q8TDM5	124 aa		3.89	□□□□□ -1.79
CASC19-238	ENST00000641523	HMCN2	Q8NDA2	5059 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	IGHV1-58	A0A0C4DH39	117 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	MT-ND4L	P03901	98 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	HIST1H2BO	P23527	126 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	HIST1H2BB	P33778	126 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	HIST1H2BD	P58876	126 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	HIST1H2BC	P62807	126 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	SYCN	Q0VAF6	134 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	HIST2H2BE	Q16778	126 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	ADM2	Q7Z4H4	148 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	HIST1H2BH	Q93079	126 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	HIST1H2BN	Q99877	126 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	HIST1H2BM	Q99879	126 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	SMDT1	Q9H4I9	107 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	PLAC8	Q9NZF1	115 aa		3.88	□□□□□ -1.79
CASC19-238	ENST00000641523	LRP1	Q07954	4544 aa	Known RBP	3.87	□□□□□ -1.79
CASC19-238	ENST00000641523	C1orf196	B1AJZ1	125 aa		3.87	□□□□□ -1.79
CASC19-238	ENST00000641523	DPM2	O94777	84 aa		3.87	□□□□□ -1.79
CASC19-238	ENST00000641523	XCL1	P47992	114 aa		3.87	□□□□□ -1.79
CASC19-238	ENST00000641523	PCP2	Q8IVA1	136 aa		3.87	□□□□□ -1.79
CASC19-238	ENST00000641523	TMEM242	Q9NWH2	141 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms