RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 KRTAP10-1P60331 282 aa8.3□□□□□ -1.08
PHGDH-218ENST00000641491 SPACA4Q8TDM5 124 aa8.3□□□□□ -1.08
PHGDH-218ENST00000641491 PRO1933Q9H354 126 aa8.3□□□□□ -1.08
PHGDH-218ENST00000641491 LBHQ53QV2 105 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-218ENST00000641491 SPANXB1Q9NS25 103 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-218ENST00000641491 HIGD1BQ9P298 99 aa8.29□□□□□ -1.08
PHGDH-218ENST00000641491 TMEM238LA0A1B0GVL6 79 aa8.28□□□□□ -1.08
PHGDH-218ENST00000641491 A6NJY4 79 aa8.28□□□□□ -1.08
PHGDH-218ENST00000641491 UBE2BP63146 152 aa8.28□□□□□ -1.08
PHGDH-218ENST00000641491 LINC00518Q8N0U6 118 aa8.28□□□□□ -1.08
PHGDH-218ENST00000641491 LINC00308Q8TCZ7 52 aa8.28□□□□□ -1.08
PHGDH-218ENST00000641491 C7orf33Q8WU49 177 aa8.28□□□□□ -1.08
PHGDH-218ENST00000641491 M0QXV9 152 aa8.27□□□□□ -1.09
PHGDH-218ENST00000641491 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-218ENST00000641491 A0A087WYN8 130 aa8.26□□□□□ -1.09
PHGDH-218ENST00000641491 S100A7L2Q5SY68 101 aa8.26□□□□□ -1.09
PHGDH-218ENST00000641491 C9orf129Q5T035 196 aaKnown RBP8.26□□□□□ -1.09
PHGDH-218ENST00000641491 ADAMTSL4-AS1Q5T5F5 129 aa8.26□□□□□ -1.09
PHGDH-218ENST00000641491 CBY1Q9Y3M2 126 aa8.26□□□□□ -1.09
PHGDH-218ENST00000641491 FAT2Q9NYQ8 4349 aa8.25□□□□□ -1.09
PHGDH-218ENST00000641491 NCR3O14931 201 aa8.25□□□□□ -1.09
PHGDH-218ENST00000641491 HSD52Q0P140 79 aa8.25□□□□□ -1.09
PHGDH-218ENST00000641491 TAL2Q16559 108 aa8.25□□□□□ -1.09
PHGDH-218ENST00000641491 MUSTN1Q8IVN3 82 aa8.25□□□□□ -1.09
PHGDH-218ENST00000641491 TP73-AS1Q9UF72 201 aa8.25□□□□□ -1.09
PHGDH-218ENST00000641491 OR13C6PQ8NH95 151 aa8.24□□□□□ -1.09
PHGDH-218ENST00000641491 LITAFQ99732 161 aa8.24□□□□□ -1.09
PHGDH-218ENST00000641491 PLA2G2DQ9UNK4 145 aa8.24□□□□□ -1.09
PHGDH-218ENST00000641491 DNAH11Q96DT5 4516 aa8.23□□□□□ -1.09
PHGDH-218ENST00000641491 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
PHGDH-218ENST00000641491 M0R378 163 aa8.23□□□□□ -1.09
PHGDH-218ENST00000641491 NDUFC2O95298 119 aa8.23□□□□□ -1.09
PHGDH-218ENST00000641491 SCXQ7RTU7 201 aa8.23□□□□□ -1.09
PHGDH-218ENST00000641491 MRPL55Q7Z7F7 128 aaKnown RBP8.23□□□□□ -1.09
PHGDH-218ENST00000641491 PLAC8Q9NZF1 115 aa8.23□□□□□ -1.09
PHGDH-218ENST00000641491 DYNC1H1Q14204 4646 aaKnown RBP8.23□□□□□ -1.09
PHGDH-218ENST00000641491 GAGE10A6NGK3 116 aa8.22□□□□□ -1.09
PHGDH-218ENST00000641491 M0R143 59 aa8.22□□□□□ -1.09
PHGDH-218ENST00000641491 Q6ZSA8 131 aa8.22□□□□□ -1.09
PHGDH-218ENST00000641491 CIRBP-AS1Q8TBR5 109 aa8.22□□□□□ -1.09
PHGDH-218ENST00000641491 RAB37Q96AX2 223 aa8.22□□□□□ -1.09
PHGDH-218ENST00000641491 C22orf24Q9Y442 160 aa8.22□□□□□ -1.09
PHGDH-218ENST00000641491 TRAV13-2A0A0B4J235 113 aa8.21□□□□□ -1.1
PHGDH-218ENST00000641491 A0A1W2PNN7 141 aa8.21□□□□□ -1.1
PHGDH-218ENST00000641491 A6NDN8 102 aa8.21□□□□□ -1.1
PHGDH-218ENST00000641491 SERTAD4-AS1Q5TG53 156 aa8.21□□□□□ -1.1
PHGDH-218ENST00000641491 C2orf91Q6ZV80 131 aa8.21□□□□□ -1.1
PHGDH-218ENST00000641491 CEND1Q8N111 149 aa8.21□□□□□ -1.1
PHGDH-218ENST00000641491 PPDPFQ9H3Y8 114 aa8.21□□□□□ -1.1
PHGDH-218ENST00000641491 FAM30AQ9NZY2 134 aa8.21□□□□□ -1.1
PHGDH-218ENST00000641491 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
PHGDH-218ENST00000641491 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
PHGDH-218ENST00000641491 TRBV10-2A0A0K0K1G8 114 aa8.2□□□□□ -1.1
PHGDH-218ENST00000641491 PANO1I0J062 215 aa8.2□□□□□ -1.1
PHGDH-218ENST00000641491 VPREB1P12018 145 aa8.2□□□□□ -1.1
PHGDH-218ENST00000641491 HAMPP81172 84 aa8.2□□□□□ -1.1
PHGDH-218ENST00000641491 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
PHGDH-218ENST00000641491 HERC1Q15751 4861 aa8.19□□□□□ -1.1
PHGDH-218ENST00000641491 CDK2AP2O75956 126 aa8.19□□□□□ -1.1
PHGDH-218ENST00000641491 DDTP30046 118 aa8.19□□□□□ -1.1
PHGDH-218ENST00000641491 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
PHGDH-218ENST00000641491 IGKV2-28A0A075B6P5 120 aa8.18□□□□□ -1.1
PHGDH-218ENST00000641491 A4D1N5 150 aa8.18□□□□□ -1.1
PHGDH-218ENST00000641491 IGKV2D-28P01615 120 aa8.18□□□□□ -1.1
PHGDH-218ENST00000641491 HINT1P49773 126 aaPredicted RBP8.18□□□□□ -1.1
PHGDH-218ENST00000641491 Q1RN00 199 aa8.18□□□□□ -1.1
PHGDH-218ENST00000641491 SOSTDC1Q6X4U4 206 aa8.18□□□□□ -1.1
PHGDH-218ENST00000641491 HSPG2P98160 4391 aa8.17□□□□□ -1.1
PHGDH-218ENST00000641491 CTAG1AP78358 180 aa8.17□□□□□ -1.1
PHGDH-218ENST00000641491 TMEM126AQ9H061 195 aa8.17□□□□□ -1.1
PHGDH-218ENST00000641491 PKD1P98161 4303 aa8.17□□□□□ -1.1
PHGDH-218ENST00000641491 RPL37AP8A6NKH3 93 aa8.16□□□□□ -1.1
PHGDH-218ENST00000641491 FAM229AH3BQW9 127 aa8.16□□□□□ -1.1
PHGDH-218ENST00000641491 LINC00167Q96N53 147 aa8.16□□□□□ -1.1
PHGDH-218ENST00000641491 PRR3P79522 188 aaKnown RBP8.15□□□□□ -1.1
PHGDH-218ENST00000641491 BATFQ16520 125 aa8.15□□□□□ -1.1
PHGDH-218ENST00000641491 NHP2Q9NX24 153 aaKnown RBP8.15□□□□□ -1.1
PHGDH-218ENST00000641491 DNAH5Q8TE73 4624 aa8.15□□□□□ -1.1
PHGDH-218ENST00000641491 TRAV23DV6A0A075B6W5 121 aa8.14□□□□□ -1.11
PHGDH-218ENST00000641491 TRBV10-3A0A0K0K1G6 114 aa8.14□□□□□ -1.11
PHGDH-218ENST00000641491 PCP4L1A6NKN8 68 aa8.14□□□□□ -1.11
PHGDH-218ENST00000641491 PRYO14603 147 aa8.14□□□□□ -1.11
PHGDH-218ENST00000641491 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
PHGDH-218ENST00000641491 ETDCA0A1B0GVM5 59 aa8.13□□□□□ -1.11
PHGDH-218ENST00000641491 PLA2G1BP04054 148 aaKnown RBP8.13□□□□□ -1.11
PHGDH-218ENST00000641491 RPL13AP40429 203 aaKnown RBP8.13□□□□□ -1.11
PHGDH-218ENST00000641491 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
PHGDH-218ENST00000641491 REG3GQ6UW15 175 aa8.13□□□□□ -1.11
PHGDH-218ENST00000641491 A0A0B4J2C4 111 aa8.12□□□□□ -1.11
PHGDH-218ENST00000641491 H7C2G1 150 aa8.12□□□□□ -1.11
PHGDH-218ENST00000641491 EIF4EBP3O60516 100 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-218ENST00000641491 SMR3BP02814 79 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-218ENST00000641491 UBE2AP49459 152 aa8.12□□□□□ -1.11
PHGDH-218ENST00000641491 FXYD2P54710 66 aa8.12□□□□□ -1.11
PHGDH-218ENST00000641491 XGP55808 180 aa8.12□□□□□ -1.11
PHGDH-218ENST00000641491 C1orf137Q5JT78 98 aa8.12□□□□□ -1.11
PHGDH-218ENST00000641491 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
PHGDH-218ENST00000641491 VAMP3Q15836 100 aa8.11□□□□□ -1.11
PHGDH-218ENST00000641491 Q8N1X5 172 aa8.11□□□□□ -1.11
PHGDH-218ENST00000641491 Q8NDZ9 215 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms