RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SYCNQ0VAF6 134 aa11.4□□□□□ -0.58
PHGDH-208ENST00000641023 TRBV10-2A0A0K0K1G8 114 aa11.4□□□□□ -0.58
PHGDH-208ENST00000641023 NDUFC2-KCTD14E9PQ53 114 aa11.39□□□□□ -0.59
PHGDH-208ENST00000641023 M0QXV9 152 aa11.39□□□□□ -0.59
PHGDH-208ENST00000641023 USP17L23D6RBM5 183 aa11.39□□□□□ -0.59
PHGDH-208ENST00000641023 ANKRD29Q8N6D5 301 aa11.39□□□□□ -0.59
PHGDH-208ENST00000641023 H0YGX0 51 aa11.38□□□□□ -0.59
PHGDH-208ENST00000641023 C21orf62-AS1Q17RA5 79 aa11.38□□□□□ -0.59
PHGDH-208ENST00000641023 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
PHGDH-208ENST00000641023 PRKDCP78527 4128 aaKnown RBP11.38□□□□□ -0.59
PHGDH-208ENST00000641023 DNAH1Q9P2D7 4330 aa11.37□□□□□ -0.59
PHGDH-208ENST00000641023 NCR3O14931 201 aa11.37□□□□□ -0.59
PHGDH-208ENST00000641023 S100A7L2Q5SY68 101 aa11.37□□□□□ -0.59
PHGDH-208ENST00000641023 TEN1Q86WV5 123 aa11.37□□□□□ -0.59
PHGDH-208ENST00000641023 DYNC2H1Q8NCM8 4307 aaKnown RBP11.37□□□□□ -0.59
PHGDH-208ENST00000641023 J3QR89 54 aa11.36□□□□□ -0.59
PHGDH-208ENST00000641023 TRACP01848 142 aa11.36□□□□□ -0.59
PHGDH-208ENST00000641023 CASC10Q5T4H9 136 aa11.36□□□□□ -0.59
PHGDH-208ENST00000641023 Q8NDZ9 215 aa11.36□□□□□ -0.59
PHGDH-208ENST00000641023 MEGF8Q7Z7M0 2845 aa11.36□□□□□ -0.59
PHGDH-208ENST00000641023 CARD19Q96LW7 228 aa11.35□□□□□ -0.59
PHGDH-208ENST00000641023 LINC01600Q96MT4 127 aa11.35□□□□□ -0.59
PHGDH-208ENST00000641023 LYSTQ99698 3801 aa11.35□□□□□ -0.59
PHGDH-208ENST00000641023 KRTAP1-5Q9BYS1 174 aa11.35□□□□□ -0.59
PHGDH-208ENST00000641023 CSMD3Q7Z407 3707 aa11.35□□□□□ -0.59
PHGDH-208ENST00000641023 H3BT86 120 aa11.34□□□□□ -0.59
PHGDH-208ENST00000641023 RNF151Q2KHN1 245 aa11.34□□□□□ -0.59
PHGDH-208ENST00000641023 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
PHGDH-208ENST00000641023 FAM218AQ96MZ4 157 aa11.33□□□□□ -0.6
PHGDH-208ENST00000641023 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
PHGDH-208ENST00000641023 RPL18AQ02543 176 aaKnown RBP11.32□□□□□ -0.6
PHGDH-208ENST00000641023 Q6ZRP5 223 aa11.32□□□□□ -0.6
PHGDH-208ENST00000641023 PLECQ15149 4684 aaKnown RBP11.32□□□□□ -0.6
PHGDH-208ENST00000641023 PSCAO43653 123 aa11.31□□□□□ -0.6
PHGDH-208ENST00000641023 LECT2O14960 151 aa11.31□□□□□ -0.6
PHGDH-208ENST00000641023 SLPIP03973 132 aa11.31□□□□□ -0.6
PHGDH-208ENST00000641023 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
PHGDH-208ENST00000641023 TTC32Q5I0X7 151 aa11.31□□□□□ -0.6
PHGDH-208ENST00000641023 PPDPFLQ8WWR9 84 aa11.31□□□□□ -0.6
PHGDH-208ENST00000641023 IGLV6-57P01721 117 aa11.3□□□□□ -0.6
PHGDH-208ENST00000641023 DNAL4O96015 105 aa11.29□□□□□ -0.6
PHGDH-208ENST00000641023 VPREB1P12018 145 aa11.28□□□□□ -0.6
PHGDH-208ENST00000641023 A0A087WYN8 130 aa11.28□□□□□ -0.6
PHGDH-208ENST00000641023 NBDYA0A0U1RRE5 68 aa11.28□□□□□ -0.6
PHGDH-208ENST00000641023 C6orf99Q4VX62 202 aa11.27□□□□□ -0.61
PHGDH-208ENST00000641023 VPS25Q9BRG1 176 aa11.27□□□□□ -0.61
PHGDH-208ENST00000641023 TRBV10-3A0A0K0K1G6 114 aa11.26□□□□□ -0.61
PHGDH-208ENST00000641023 M0R378 163 aa11.25□□□□□ -0.61
PHGDH-208ENST00000641023 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
PHGDH-208ENST00000641023 C9orf129Q5T035 196 aaKnown RBP11.25□□□□□ -0.61
PHGDH-208ENST00000641023 TENM2Q9NT68 2774 aa11.25□□□□□ -0.61
PHGDH-208ENST00000641023 A0A1B0GX51 115 aa11.24□□□□□ -0.61
PHGDH-208ENST00000641023 DNAH7Q8WXX0 4024 aa11.24□□□□□ -0.61
PHGDH-208ENST00000641023 SNCGO76070 127 aa11.24□□□□□ -0.61
PHGDH-208ENST00000641023 STARD9Q9P2P6 4700 aa11.24□□□□□ -0.61
PHGDH-208ENST00000641023 TRAV23DV6A0A075B6W5 121 aa11.23□□□□□ -0.61
PHGDH-208ENST00000641023 TEX49A0A1B0GTD5 131 aa11.23□□□□□ -0.61
PHGDH-208ENST00000641023 C14orf177Q52M58 125 aa11.23□□□□□ -0.61
PHGDH-208ENST00000641023 LOC107984640A0A0U1RRK4 108 aa11.21□□□□□ -0.62
PHGDH-208ENST00000641023 NKAPP1Q8N9T2 125 aa11.21□□□□□ -0.62
PHGDH-208ENST00000641023 Q8N814 137 aa11.2□□□□□ -0.62
PHGDH-208ENST00000641023 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
PHGDH-208ENST00000641023 CNBPP62633 177 aaKnown RBP11.2□□□□□ -0.62
PHGDH-208ENST00000641023 GAGE2BQ13066 116 aa11.2□□□□□ -0.62
PHGDH-208ENST00000641023 DIRC1Q969H9 104 aa11.2□□□□□ -0.62
PHGDH-208ENST00000641023 DNAH10Q8IVF4 4471 aa11.19□□□□□ -0.62
PHGDH-208ENST00000641023 ZNF73O43830 326 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-208ENST00000641023 ORMDL1Q9P0S3 153 aa11.18□□□□□ -0.62
PHGDH-208ENST00000641023 SERTAD4-AS1Q5TG53 156 aa11.17□□□□□ -0.62
PHGDH-208ENST00000641023 LINC00575Q6W349 94 aa11.17□□□□□ -0.62
PHGDH-208ENST00000641023 LINC00167Q96N53 147 aa11.16□□□□□ -0.62
PHGDH-208ENST00000641023 hADV29S1A0JD25 119 aa11.15□□□□□ -0.62
PHGDH-208ENST00000641023 SVIPQ8NHG7 77 aa11.15□□□□□ -0.62
PHGDH-208ENST00000641023 FBN3Q75N90 2809 aa11.15□□□□□ -0.62
PHGDH-208ENST00000641023 TRBV7-6A0A0J9YX20 115 aa11.15□□□□□ -0.63
PHGDH-208ENST00000641023 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.14□□□□□ -0.63
PHGDH-208ENST00000641023 M0R2N4 97 aa11.14□□□□□ -0.63
PHGDH-208ENST00000641023 IGLV5-37A0A075B6J1 123 aa11.13□□□□□ -0.63
PHGDH-208ENST00000641023 Q6ZRN7 208 aaPredicted RBP11.13□□□□□ -0.63
PHGDH-208ENST00000641023 C7orf33Q8WU49 177 aa11.13□□□□□ -0.63
PHGDH-208ENST00000641023 C22orf24Q9Y442 160 aa11.13□□□□□ -0.63
PHGDH-208ENST00000641023 LRCOL1A6NCL2 159 aa11.13□□□□□ -0.63
PHGDH-208ENST00000641023 COX7BP24311 80 aa11.13□□□□□ -0.63
PHGDH-208ENST00000641023 FAM168BA1KXE4 195 aa11.12□□□□□ -0.63
PHGDH-208ENST00000641023 ELOF1P60002 83 aaKnown RBP11.12□□□□□ -0.63
PHGDH-208ENST00000641023 VPS13DQ5THJ4 4388 aa11.12□□□□□ -0.63
PHGDH-208ENST00000641023 C16orf90A8MZG2 172 aa11.12□□□□□ -0.63
PHGDH-208ENST00000641023 TMEM256-PLSCR3K7ERE1 68 aa11.12□□□□□ -0.63
PHGDH-208ENST00000641023 KCNQ1DNQ9H478 68 aa11.12□□□□□ -0.63
PHGDH-208ENST00000641023 INAFM2P0DMQ5 153 aa11.1□□□□□ -0.63
PHGDH-208ENST00000641023 WWC2-AS2Q96NR7 200 aa11.09□□□□□ -0.63
PHGDH-208ENST00000641023 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.63
PHGDH-208ENST00000641023 A0A096LNI7 61 aa11.08□□□□□ -0.64
PHGDH-208ENST00000641023 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
PHGDH-208ENST00000641023 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
PHGDH-208ENST00000641023 IGLV1-50A0A075B6I6 118 aa11.07□□□□□ -0.64
PHGDH-208ENST00000641023 KRTAP7-1Q8IUC3 87 aa11.07□□□□□ -0.64
PHGDH-208ENST00000641023 C9orf163Q8N9P6 203 aa11.07□□□□□ -0.64
PHGDH-208ENST00000641023 IGKV2-24A0A0C4DH68 120 aa11.07□□□□□ -0.64
PHGDH-208ENST00000641023 Q6ZR54 194 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms